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Report for CCDS32153.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32153.1 Public Homo sapiens 14 GSKIP 24 110 108 CCDS HistoryNCBI Gene:51527Re-query CCDS DB by CCDS ID:32153.1Re-query CCDS DB by GeneID:51527See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32153.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000438650.5 ENSP00000412315.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000438650.5Link to Ensembl Protein Viewer:ENSP00000412315.1Re-query CCDS DB by Nucleotide ID:ENST00000438650Re-query CCDS DB by Protein ID:ENSP00000412315
Original member Current member EBI ENST00000555181.6 ENSP00000450420.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000555181.6Link to Ensembl Protein Viewer:ENSP00000450420.1Re-query CCDS DB by Nucleotide ID:ENST00000555181Re-query CCDS DB by Protein ID:ENSP00000450420
Original member Current member EBI ENST00000556095.5 ENSP00000451188.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000556095.5Link to Ensembl Protein Viewer:ENSP00000451188.1Re-query CCDS DB by Nucleotide ID:ENST00000556095Re-query CCDS DB by Protein ID:ENSP00000451188
Original member Current member EBI ENST00000554182.5 ENSP00000451384.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000554182.5Link to Ensembl Protein Viewer:ENSP00000451384.1Re-query CCDS DB by Nucleotide ID:ENST00000554182Re-query CCDS DB by Protein ID:ENSP00000451384
Original member Current member NCBI NM_001271904.1 NP_001258833.1 Accepted alive Link to Nucleotide Sequence:NM_001271904.1Link to Protein Sequence:NP_001258833.1Re-query CCDS DB by Nucleotide ID:NM_001271904Re-query CCDS DB by Protein ID:NP_001258833Link to BLAST:NP_001258833.1
Original member Current member NCBI NM_001271905.2 NP_001258834.1 Accepted alive Link to Nucleotide Sequence:NM_001271905.2Link to Protein Sequence:NP_001258834.1Re-query CCDS DB by Nucleotide ID:NM_001271905Re-query CCDS DB by Protein ID:NP_001258834Link to BLAST:NP_001258834.1
Original member Current member NCBI NM_001271906.2 NP_001258835.1 Accepted alive Link to Nucleotide Sequence:NM_001271906.2Link to Protein Sequence:NP_001258835.1Re-query CCDS DB by Nucleotide ID:NM_001271906Re-query CCDS DB by Protein ID:NP_001258835Link to BLAST:NP_001258835.1
Original member Current member NCBI NM_016472.5 NP_057556.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016472.5Link to Protein Sequence:NP_057556.2Re-query CCDS DB by Nucleotide ID:NM_016472Re-query CCDS DB by Protein ID:NP_057556Link to BLAST:NP_057556.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001258833.1 139 Q9P0R6 139 100% 0 0
NP_001258834.1 139 Q9P0R6 139 100% 0 0
NP_001258835.1 139 Q9P0R6 139 100% 0 0
NP_057556.2 139 Q9P0R6 139 100% 0 0

Chromosomal Locations for CCDS 32153.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 96382248 96382505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 96385523 96385684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (420 nt):
ATGGAAACAGACTGTAATCCCATGGAGCTAAGCAGTATGTCAGGATTTGAAGAAGGTTCAGAGCTGAACG
GTTTTGAAGGAACTGACATGAAAGACATGAGGCTCGAAGCTGAAGCAGTTGTAAATGATGTTCTCTTTGC
TGTTAACAACATGTTTGTCTCGAAAAGCCTGCGGTGTGCGGATGATGTGGCCTATATCAATGTGGAAACA
AAGGAAAGAAACAGATATTGCCTAGAACTCACTGAAGCAGGGCTCAAGGTGGTAGGCTATGCTTTTGACC
AGGTAGATGATCATTTACAGACTCCCTACCATGAAACAGTCTACTCCTTGTTGGATACACTCAGCCCCGC
CTACCGAGAAGCATTTGGAAACGCACTGCTTCAAAGACTGGAAGCTTTGAAAAGAGATGGACAGTCATGA

Translation (139 aa):
METDCNPMELSSMSGFEEGSELNGFEGTDMKDMRLEAEAVVNDVLFAVNNMFVSKSLRCADDVAYINVET
KERNRYCLELTEAGLKVVGYAFDQVDDHLQTPYHETVYSLLDTLSPAYREAFGNALLQRLEALKRDGQS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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