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Report for CCDS11537.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11537.2 Public Homo sapiens 17 TTLL6 24 110 108 CCDS HistoryNCBI Gene:284076Re-query CCDS DB by CCDS ID:11537.2Re-query CCDS DB by GeneID:284076See the combined annotation on chromosome 17 in Sequence Viewer

Public Note for CCDS 11537.1
The coding region has been updated to extend the N-terminus to one that is more supported by available transcript and conservation data.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 11537.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000433608.6 ENSP00000399211.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000433608.6Link to Ensembl Protein Viewer:ENSP00000399211.2Re-query CCDS DB by Nucleotide ID:ENST00000433608Re-query CCDS DB by Protein ID:ENSP00000399211
Original member Current member NCBI NM_173623.4 NP_775894.2 Accepted alive Link to Nucleotide Sequence:NM_173623.4Link to Protein Sequence:NP_775894.2Re-query CCDS DB by Nucleotide ID:NM_173623Re-query CCDS DB by Protein ID:NP_775894Link to BLAST:NP_775894.2

Chromosomal Locations for CCDS 11537.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 48768989 48769254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 48769728 48770097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 48784923 48785201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 48786164 48786335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 48787811 48787999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 48789931 48790106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 48791378 48791603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 48794204 48794280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1755 nt):
ATGAGAATTGGCACCCCAACAGCAGGCCCTGGGCCCTCGGCTGTGATGGAGGGGTGTCTCGGGGTAGCAG
AACTAAGGAAGCTCTCCACCTTCAGTGCATACTTGGAGGACCACAGCTACAACGTGGAGCAGATATGGAG
GGATATTGAGGACGTCATCATCAAGACCCTCATCTCGGCCCACCCCATCATCAGGCATAACTACCACACC
TGCTTCCCCAACCACACACTCAACAGCGCCTGCTTTGAGATCCTGGGCTTTGACATTTTGTTGGACCACA
AACTCAAACCCTGGCTGCTGGAGGTCAACCACTCTCCAAGCTTCTCCACCGACTCTCGGTTGGATAAAGA
GGTGAAAGATGGTCTGCTGTATGACACCTTAGTCCTGATCAACCTGGAAAGCTGTGACAAGAAGAAAGTC
TTGGAGGAGGAGAGACAACGGGGGCAGTTCCTGCAGCAGTGTTGTTCTCGGGAGATGAGGATTGAGGAAG
CCAAGGGTTTCCGGGCCGTGCAGTTAAAGAAAACTGAAACGTATGAGAAGGAAAACTGTGGAGGGTTCCG
ACTGATTTATCCCAGTCTGAATTCGGAGAAGTATGAGAAGTTTTTCCAGGACAACAACTCCCTCTTCCAG
AATACTGTTGCTTCCAGGGCTCGGGAGGAGTATGCCCGGCAACTGATCCAGGAGCTGAGACTAAAACGGG
AGAAAAAGCCCTTCCAAATGAAGAAGAAGGTAGAGATGCAGGGGGAATCGGCAGGCGAGCAAGTGAGAAA
GAAGGGCATGAGGGGCTGGCAACAGAAACAACAGCAGAAAGACAAGGCCGCCACCCAAGCCTCCAAACAG
TACATCCAGCCATTGACATTAGTATCCTACACACCTGACTTGCTCTTGAGTGTCAGAGGTGAAAGGAAAA
ATGAAACAGACAGCAGCCTCAACCAGGAGGCTCCCACGGAGGAGGCCAGCTCTGTTTTCCCCAAGCTGAC
GTCTGCGAAGCCCTTCAGTTCTCTACCCGATCTGAGGAATATCAATCTCAGCAGCTCGAAGTTGGAGCCC
AGTAAACCCAACTTCAGCATCAAGGAGGCCAAGTCTGCCTCTGCAGTGAACGTATTCACTGGCACTGTGC
ACTTAACCTCCGTAGAAACCACCCCAGAATCCACCACCCAACTCTCAATCTCCCCAAAGTCTCCGCCAAC
CCTGGCTGTGACCGCCAGCTCTGAGTACAGTGGCCCAGAGACGGACAGGGTGGTATCCTTTAAATGCAAG
AAGCAGCAGACCCCTCCACACTTAACCCAGAAGAAAATGTTAAAATCTTTTCTGCCCACAAAATCCAAGA
GCTTCTGGGAGAGTCCGAACACAAACTGGACTTTGCTAAAGAGTGACATGAACAAGCCACATTTGATATC
CGAGCTACTCACCAAGCTTCAACTGAGTGGGAAGCTCTCCTTCTTCCCAGCTCACTACAACCCCAAGCTG
GGGATGAATAACCTGTCACAAAACCCCTCCCTGCCTGGGGAGTGCCACTCCCGCAGTGACAGCTCTGGCG
AGAAGAGGCAGCTGGATGTGTCCTCCCTCCTCTTGCAGAGTCCTCAGAGCTATAATGTTACTCTGAGGGA
CCTGCTGGTGATTGCCACTCCAGCCCAACTGGATCCAAGGCCTTGTAGAAGCCACGCAAGTGCTATGAGG
GACCCATGTATGCAGGATCAAGAAGCATACAGCCATTGCCTGATCTCTGGCCAAAAAGGATGTGAGAGGA
GCTAG

Translation (584 aa):
MRIGTPTAGPGPSAVMEGCLGVAELRKLSTFSAYLEDHSYNVEQIWRDIEDVIIKTLISAHPIIRHNYHT
CFPNHTLNSACFEILGFDILLDHKLKPWLLEVNHSPSFSTDSRLDKEVKDGLLYDTLVLINLESCDKKKV
LEEERQRGQFLQQCCSREMRIEEAKGFRAVQLKKTETYEKENCGGFRLIYPSLNSEKYEKFFQDNNSLFQ
NTVASRAREEYARQLIQELRLKREKKPFQMKKKVEMQGESAGEQVRKKGMRGWQQKQQQKDKAATQASKQ
YIQPLTLVSYTPDLLLSVRGERKNETDSSLNQEAPTEEASSVFPKLTSAKPFSSLPDLRNINLSSSKLEP
SKPNFSIKEAKSASAVNVFTGTVHLTSVETTPESTTQLSISPKSPPTLAVTASSEYSGPETDRVVSFKCK
KQQTPPHLTQKKMLKSFLPTKSKSFWESPNTNWTLLKSDMNKPHLISELLTKLQLSGKLSFFPAHYNPKL
GMNNLSQNPSLPGECHSRSDSSGEKRQLDVSSLLLQSPQSYNVTLRDLLVIATPAQLDPRPCRSHASAMR
DPCMQDQEAYSHCLISGQKGCERS


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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