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Report for CCDS12499.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12499.1 Public Homo sapiens 19 ZNF585A 24 110 108 CCDS HistoryNCBI Gene:199704Re-query CCDS DB by CCDS ID:12499.1Re-query CCDS DB by GeneID:199704See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12499.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000356958.8 ENSP00000349440.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000356958.8Link to Ensembl Protein Viewer:ENSP00000349440.3Re-query CCDS DB by Nucleotide ID:ENST00000356958Re-query CCDS DB by Protein ID:ENSP00000349440
Original member Current member EBI ENST00000392157.2 ENSP00000375998.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392157.2Link to Ensembl Protein Viewer:ENSP00000375998.1Re-query CCDS DB by Nucleotide ID:ENST00000392157Re-query CCDS DB by Protein ID:ENSP00000375998
Original member Current member NCBI NM_152655.4 NP_689868.1 Accepted alive Link to Nucleotide Sequence:NM_152655.4Link to Protein Sequence:NP_689868.1Re-query CCDS DB by Nucleotide ID:NM_152655Re-query CCDS DB by Protein ID:NP_689868Link to BLAST:NP_689868.1
Original member Current member NCBI NM_199126.3 NP_954577.1 Accepted alive Link to Nucleotide Sequence:NM_199126.3Link to Protein Sequence:NP_954577.1Re-query CCDS DB by Nucleotide ID:NM_199126Re-query CCDS DB by Protein ID:NP_954577Link to BLAST:NP_954577.1

Chromosomal Locations for CCDS 12499.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 37151589 37153606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37155865 37155957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37156229 37156262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2145 nt):
ATGCTGGAGACCTACAGCCACCTGCTCTCAGTAGGATATCAAGTTCCTGAAGCAGAGGTGGTCATGTTGG
AGCAAGGAAAGGAACCATGGGCACTGCAGGGTGAGAGGCCACGTCAGAGCTGCCCAGGAGAGAAATTATG
GGACCATAATCAATGTAGAAAAATCCTCAGTTATAAACAAGTATCCTCTCAACCTCAAAAAATGTATCCT
GGGGAGAAAGCTTATGAATGCGCCAAATTTGAAAAGATATTCACCCAGAAGTCACAGCTCAAAGTACACC
TGAAAGTTCTTGCAGGAGAAAAGCTCTATGTATGCATTGAATGTGGGAAGGCTTTTGTACAGAAGCCAGA
ATTTATTATACACCAGAAAACCCATATGAGAGAGAAACCCTTTAAATGCAATGAATGTGGAAAATCCTTT
TTTCAAGTGTCGTCCCTCTTCAGGCATCAGAGAATTCATACCGGAGAGAAACTCTATGAATGCAGCCAGT
GTGGGAAAGGCTTCTCTTATAACTCAGATCTCAGTATACATGAGAAAATTCATACTGGAGAGAGACACCA
TGAATGCACTGACTGTGGCAAAGCATTCACACAAAAGTCCACACTCAAGATGCATCAGAAAATCCATACA
GGCGAGAGATCCTACATCTGTATTGAATGCGGACAGGCCTTCATCCAGAAGACCCATTTGATTGCACACC
GAAGAATTCATACTGGAGAAAAACCATATGAGTGCAGTAACTGTGGCAAATCCTTCATTTCCAAGTCACA
ACTTCAGGTACATCAACGTGTTCACACAAGAGTGAAGCCCTATATATGTACCGAATATGGGAAGGTCTTC
AGCAATAATTCCAACCTCGTTACACATAAGAAAGTTCAAAGTAGAGAGAAATCTTCCATATGTACTGAGT
GTGGGAAGGCCTTTACCTACAGGTCAGAGTTGATTATTCATCAGAGAATTCACACTGGAGAGAAACCTTA
TGAATGCAGTGACTGTGGGAAAGCCTTCACTCAGAAGTCAGCACTCACAGTGCATCAGAGAATTCATACA
GGAGAAAAATCGTATATATGCATGAAATGTGGACTGGCCTTCATTCAGAAGGCACACTTGATTGCACATC
AAATAATTCATACTGGAGAGAAACCTCATAAATGTGGTCACTGTGGGAAATTGTTTACCTCCAAGTCGCA
ACTCCATGTTCATAAACGAATTCACACAGGAGAAAAGCCCTATATGTGCAATAAATGTGGGAAGGCATTC
ACCAACCGGTCAAATCTCATTACACATCAGAAAACTCATACAGGAGAGAAATCTTATATATGTTCCAAAT
GTGGAAAGGCCTTCACCCAGAGGTCAGACTTGATTACACATCAGAGAATCCATACTGGGGAGAAGCCTTA
TGAATGCAATACTTGTGGAAAAGCCTTCACTCAGAAGTCACACCTCAATATACATCAGAAAATTCACACT
GGAGAGAGACAGTATGAATGCCACGAATGTGGGAAAGCCTTCAACCAGAAATCAATACTCATTGTTCATC
AGAAAATTCATACAGGAGAGAAACCCTATGTATGCACTGAGTGTGGAAGAGCTTTCATCCGCAAGTCAAA
CTTTATTACTCATCAAAGAATTCATACTGGAGAGAAGCCTTATGAATGCAGTGACTGTGGGAAGTCCTTT
ACCTCCAAGTCTCAGCTCCTGGTGCATCAGCCAGTTCACACAGGAGAGAAACCCTATGTGTGTGCCGAGT
GCGGGAAGGCCTTTAGTGGCAGGTCAAATCTCAGTAAGCACCAGAAAACTCATACCGGAGAAAAGCCCTA
CATTTGTTCTGAATGTGGGAAGACCTTTCGACAGAAGTCAGAGTTGATTACACATCACAGAATTCATACT
GGAGAGAAACCTTATGAGTGCAGTGACTGTGGGAAGTCTTTCACTAAAAAATCACAGCTCCAAGTGCATC
AGCGAATTCACACTGGAGAGAAGCCTTACGTGTGTGCTGAGTGTGGGAAGGCCTTTACTGACAGGTCCAA
TTTGAATAAACATCAGACAACACACACTGGAGACAAACCCTACAAGTGTGGCATCTGTGGGAAAGGCTTC
GTTCAGAAATCAGTGTTCAGCGTCCATCAGAGCAGCCACGCTTGA

Translation (714 aa):
MLETYSHLLSVGYQVPEAEVVMLEQGKEPWALQGERPRQSCPGEKLWDHNQCRKILSYKQVSSQPQKMYP
GEKAYECAKFEKIFTQKSQLKVHLKVLAGEKLYVCIECGKAFVQKPEFIIHQKTHMREKPFKCNECGKSF
FQVSSLFRHQRIHTGEKLYECSQCGKGFSYNSDLSIHEKIHTGERHHECTDCGKAFTQKSTLKMHQKIHT
GERSYICIECGQAFIQKTHLIAHRRIHTGEKPYECSNCGKSFISKSQLQVHQRVHTRVKPYICTEYGKVF
SNNSNLVTHKKVQSREKSSICTECGKAFTYRSELIIHQRIHTGEKPYECSDCGKAFTQKSALTVHQRIHT
GEKSYICMKCGLAFIQKAHLIAHQIIHTGEKPHKCGHCGKLFTSKSQLHVHKRIHTGEKPYMCNKCGKAF
TNRSNLITHQKTHTGEKSYICSKCGKAFTQRSDLITHQRIHTGEKPYECNTCGKAFTQKSHLNIHQKIHT
GERQYECHECGKAFNQKSILIVHQKIHTGEKPYVCTECGRAFIRKSNFITHQRIHTGEKPYECSDCGKSF
TSKSQLLVHQPVHTGEKPYVCAECGKAFSGRSNLSKHQKTHTGEKPYICSECGKTFRQKSELITHHRIHT
GEKPYECSDCGKSFTKKSQLQVHQRIHTGEKPYVCAECGKAFTDRSNLNKHQTTHTGDKPYKCGICGKGF
VQKSVFSVHQSSHA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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