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Report for CCDS46167.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46167.1 Public Homo sapiens 19 ZNF808 24 110 108 CCDS HistoryNCBI Gene:388558Re-query CCDS DB by CCDS ID:46167.1Re-query CCDS DB by GeneID:388558See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46167.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359798.9 ENSP00000352846.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000359798.9Link to Ensembl Protein Viewer:ENSP00000352846.4Re-query CCDS DB by Nucleotide ID:ENST00000359798Re-query CCDS DB by Protein ID:ENSP00000352846
Original member Current member NCBI NM_001039886.4 NP_001034975.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001039886.4Link to Protein Sequence:NP_001034975.2Re-query CCDS DB by Nucleotide ID:NM_001039886Re-query CCDS DB by Protein ID:NP_001034975Link to BLAST:NP_001034975.2
Original member Current member NCBI NM_001321424.2 NP_001308353.1 Accepted alive Link to Nucleotide Sequence:NM_001321424.2Link to Protein Sequence:NP_001308353.1Re-query CCDS DB by Nucleotide ID:NM_001321424Re-query CCDS DB by Protein ID:NP_001308353Link to BLAST:NP_001308353.1
Original member Current member NCBI NM_001321425.2 NP_001308354.1 Accepted alive Link to Nucleotide Sequence:NM_001321425.2Link to Protein Sequence:NP_001308354.1Re-query CCDS DB by Nucleotide ID:NM_001321425Re-query CCDS DB by Protein ID:NP_001308354Link to BLAST:NP_001308354.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001034975.2 903 Q8N4W9-1 903 100% 0 0
NP_001308353.1 903 Q8N4W9-1 903 100% 0 0
NP_001308354.1 903 Q8N4W9-1 903 100% 0 0

Chromosomal Locations for CCDS 46167.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 52543285 52543347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52547512 52547638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52553107 52555628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2712 nt):
ATGTTACGTGAGGAAGCAGCTCAGAAGAGGAAAGGAAAGGAGTCAGGCATGGCTCTTCCTCAGGGACGCT
TGACTTTCAGGGATGTGGCTATAGAATTCTCATTGGCAGAGTGGAAATTCCTGAACCCTGCACAGAGGGC
TTTGTACAGGGAAGTGATGTTGGAGAACTACAGGAACCTGGAGGCTGTGGATATCTCTTCCAAACACATG
ATGAAGGAGGTCTTGTCAACAGGGCAAGGCAATAGAGAAGTGATCCACACAGGGACATTGCAAAGACATC
AAAGTTATCACATTGGAGACTTTTGCTTCCAGGAAATTGAGAAAGAAATTCATAACATTGAGTTTCAGTG
TCAAGAAGATGAAAGAAATGGCCATGAAGCACCCACGACAAAAATAAAAAAGTTGACTGGTAGCACAGAC
CAACATGATCACAGGCATGCTGGAAACAAGCCTATTAAAGATCAGCTTGGATCAAGCTTTTATTCACATC
TGCCTGAACTCCACATATTTCAGATCAAAGGTGAAATTGCTAATCAACTTGAGAAGTCTACCAGTGATGC
TTCCTCAGTTTCAACATCCCAAAGAATTTCCTGTAGGCCCCAAATCCATATTTCTAATAACTATGGGAAT
AATCCCCTGAATTCTTCATTACTCCCACAAAAACAGGAAGTACACATGAGAGAAAAATCTTTCCCATGTA
ATGAGAGTGGCAAAGCCTTTAATTGTAGCTCACTCTTAAGGAAACACCAGATACCCCATTTAGGAGACAA
ACAATATAAATGTGATGTATGTGGCAAGCTCTTTAATCACAAGCAATACCTTGCATGCCATCGTAGATGT
CACACTGGAGAGAAACCTTACAAGTGTAAAGAGTGTGGAAAGTCCTTCAGTTACAAGTCATCCCTTACAT
GCCATCATAGACTTCATACTGGAGTAAAACCTTACAAGTGTAATGAGTGTGGCAAGGTCTTTCGTCAAAA
TTCAGCCCTTGTAATTCATAAGGCAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAG
GCTTTTAATCAACAATCACACCTTTCACGCCATCAAAGACTTCATACTGGAGTGAAACCTTACAAATGTA
AGATTTGTGAGAAGGCTTTTGCGTGTCATTCCTATCTGGCAAACCATACTAGAATTCATAGTGGAGAGAA
AACATACAAGTGTAATGAGTGTGGTAAGGCTTTTAATCATCAATCAAGCCTTGCACGTCATCATATACTT
CATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGTTTTCAGTCAGAAATCAACCCTTGAGA
GACATAAGAGAATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGATACAGCTTTCACGTGTAA
TTCACAGCTGGCACGACATAGAAGAATTCACACTGGAGAGAAAACTTACAAGTGTAATGAGTGTCGCAAG
ACCTTCAGCCGCAGGTCATCCCTTCTATGCCATCGTAGACTTCATAGTGGTGAAAAACCTTACAAGTGTA
ATCAGTGTGGCAATACCTTCCGTCACCGGGCATCCCTTGTATACCATCGTAGACTTCACACTCTAGAGAA
ATCTTACAAATGTACGGTTTGTAACAAGGTTTTCATGCGTAATTCAGTCCTGGCTGTACATACTAGAATT
CACACTGCAAAGAAACCTTACAAGTGTAATGAATGTGGGAAAGCTTTTAATCAACAATCACATCTTTCAC
GTCATCGTAGACTTCATACTGGAGAGAAACCTTACAAATGTGAAGCATGTGACAAAGTTTTTGGTCAGAA
ATCAGCTCTTGAGTCACATAAGAGAATTCATACTGGAGAGAAACCATACAGATGTCAGGTTTGTGACACA
GCTTTCACGTGGAATTCACAGCTGGCACGACATACAAGAATTCACACTGGAGAAAAAACTTACAAGTGTA
ATGAGTGTGGGAAGACCTTCAGTTACAAGTCATCACTTGTATGGCATCGTAGACTTCATGGTGGAGAGAA
ATCTTACAAATGTAAGGTTTGTGACAAGGCTTTCGTGTGTCGTTCCTATGTGGCAAAACATACTAGAATT
CACAGTGGAATGAAACCTTACAAGTGTAATGAGTGCAGCAAGACCTTCAGTAACAGGTCATCCCTTGTAT
GCCATCGTAGAATTCATAGTGGTGAGAAACCTTACAAGTGTAGTGAGTGCAGCAAGACGTTCAGTCAGAA
GGCAACCCTTCTATGCCATCGTAGACTTCATAGTGGTGAGAAACCTTACAAGTGTAACGACTGTGGCAAT
ACCTTCCGTCACTGGTCATCCCTTGTATACCATCGTAGACTTCATACTGGAGAGAAATCTTACAAATGTA
CGGTTTGTGACAAGGCTTTCGTGCGTAATTCATACCTGGCAAGACATATTAGAATTCACACTGCAGAGAA
ACCTTACAAGTGTAATGAATGTGGAAAGGCTTTTAATGAACAATCACACCTTTCACGTCATCATAGAATT
CATACTGGAGAGAAACCTTACAAATGTGAAGCATGTGACAAAGTTTTCAGTCGCAAATCACACCTTAAAA
GACATAGGATAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAAGCCTTTAGTGACCG
GTCAACACTTATTCACCATCAGGCAATTCATGGTATAGGGAAATTTGATTAA

Translation (903 aa):
MLREEAAQKRKGKESGMALPQGRLTFRDVAIEFSLAEWKFLNPAQRALYREVMLENYRNLEAVDISSKHM
MKEVLSTGQGNREVIHTGTLQRHQSYHIGDFCFQEIEKEIHNIEFQCQEDERNGHEAPTTKIKKLTGSTD
QHDHRHAGNKPIKDQLGSSFYSHLPELHIFQIKGEIANQLEKSTSDASSVSTSQRISCRPQIHISNNYGN
NPLNSSLLPQKQEVHMREKSFPCNESGKAFNCSSLLRKHQIPHLGDKQYKCDVCGKLFNHKQYLACHRRC
HTGEKPYKCKECGKSFSYKSSLTCHHRLHTGVKPYKCNECGKVFRQNSALVIHKAIHTGEKPYKCNECGK
AFNQQSHLSRHQRLHTGVKPYKCKICEKAFACHSYLANHTRIHSGEKTYKCNECGKAFNHQSSLARHHIL
HTGEKPYKCEECDKVFSQKSTLERHKRIHTGEKPYKCKVCDTAFTCNSQLARHRRIHTGEKTYKCNECRK
TFSRRSSLLCHRRLHSGEKPYKCNQCGNTFRHRASLVYHRRLHTLEKSYKCTVCNKVFMRNSVLAVHTRI
HTAKKPYKCNECGKAFNQQSHLSRHRRLHTGEKPYKCEACDKVFGQKSALESHKRIHTGEKPYRCQVCDT
AFTWNSQLARHTRIHTGEKTYKCNECGKTFSYKSSLVWHRRLHGGEKSYKCKVCDKAFVCRSYVAKHTRI
HSGMKPYKCNECSKTFSNRSSLVCHRRIHSGEKPYKCSECSKTFSQKATLLCHRRLHSGEKPYKCNDCGN
TFRHWSSLVYHRRLHTGEKSYKCTVCDKAFVRNSYLARHIRIHTAEKPYKCNECGKAFNEQSHLSRHHRI
HTGEKPYKCEACDKVFSRKSHLKRHRIIHTGEKPYKCNECGKAFSDRSTLIHHQAIHGIGKFD


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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