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Report for CCDS12505.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12505.1 Public Homo sapiens 19 ZNF571 24 110 108 CCDS HistoryNCBI Gene:51276Re-query CCDS DB by CCDS ID:12505.1Re-query CCDS DB by GeneID:51276See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12505.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000328550.6 ENSP00000333660.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000328550.6Link to Ensembl Protein Viewer:ENSP00000333660.2Re-query CCDS DB by Nucleotide ID:ENST00000328550Re-query CCDS DB by Protein ID:ENSP00000333660
Original member Current member EBI ENST00000358744.3 ENSP00000351594.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000358744.3Link to Ensembl Protein Viewer:ENSP00000351594.3Re-query CCDS DB by Nucleotide ID:ENST00000358744Re-query CCDS DB by Protein ID:ENSP00000351594
Original member Current member EBI ENST00000451802.7 ENSP00000392638.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000451802.7Link to Ensembl Protein Viewer:ENSP00000392638.1Re-query CCDS DB by Nucleotide ID:ENST00000451802Re-query CCDS DB by Protein ID:ENSP00000392638
Original member Current member EBI ENST00000593133.5 ENSP00000467572.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000593133.5Link to Ensembl Protein Viewer:ENSP00000467572.1Re-query CCDS DB by Nucleotide ID:ENST00000593133Re-query CCDS DB by Protein ID:ENSP00000467572
Original member Current member NCBI NM_001290314.2 NP_001277243.1 Accepted alive Link to Nucleotide Sequence:NM_001290314.2Link to Protein Sequence:NP_001277243.1Re-query CCDS DB by Nucleotide ID:NM_001290314Re-query CCDS DB by Protein ID:NP_001277243Link to BLAST:NP_001277243.1
Original member Current member NCBI NM_001321272.2 NP_001308201.1 Accepted alive Link to Nucleotide Sequence:NM_001321272.2Link to Protein Sequence:NP_001308201.1Re-query CCDS DB by Nucleotide ID:NM_001321272Re-query CCDS DB by Protein ID:NP_001308201Link to BLAST:NP_001308201.1
Original member Current member NCBI NM_016536.5 NP_057620.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016536.5Link to Protein Sequence:NP_057620.3Re-query CCDS DB by Nucleotide ID:NM_016536Re-query CCDS DB by Protein ID:NP_057620Link to BLAST:NP_057620.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001277243.1 609 Q7Z3V5 609 100% 0 0
NP_001308201.1 609 Q7Z3V5 609 100% 0 0
NP_057620.3 609 Q7Z3V5 609 100% 0 0

Chromosomal Locations for CCDS 12505.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 37564598 37566291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37583971 37584097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37586668 37586676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1830 nt):
ATGCCCCACTTGTTGGTGACTTTCAGGGATGTGGCCATTGACTTCTCTCAGGAGGAATGGGAATGCCTGG
ACCCTGCTCAGAGGGACTTGTACAGGGATGTGATGTTGGAGAACTACAGCAACCTGATCTCATTGGACTT
GGAATCCAGTTGTGTGACCAAAAAGTTATCTCCAGAAAAGGAAATTTATGAAATGGAATCACTCCAGTGG
GAGAATATGGGGAAACGTATCAACCATCACCTTCAATACAATGGTCTTGGAGACAATATGGAGTGCAAAG
GCAACTTAGAGGGTCAAGAAGCAAGTCAGGAAGGGCTTTACATGTGTGTCAAAATTACCTGTGAAGAAAA
GGCCACTGAAAGTCATTCAACCTCTTCTACTTTTCATCGGATAATTCCTACCAAGGAAAAATTGTACAAA
TGTAAGGAATGCAGACAAGGTTTCAGCTACCTGTCATGCCTTATTCAACATGAGGAAAATCATAATATAG
AAAAATGCTCTGAAGTTAAGAAACACAGGAATACCTTTAGCAAAAAGCCAAGCTATATTCAACATCAGAG
AATTCAGACTGGTGAGAAACCTTATGAGTGTATGGAATGTGGAAAGGCCTTTGGTCGTACTTCTGATCTC
ATTCAACATCAGAAAATTCATACTAATGAAAAACCTTATCAGTGTAACGCATGTGGGAAAGCTTTTATTC
GTGGTTCACAGCTCACTGAACATCAGAGAGTTCATACAGGAGAGAAACCATATGAATGTAAGAAATGTGG
AAAAGCCTTTAGTTATTGTTCACAATATACTCTTCATCAGAGAATTCATAGTGGTGAAAAACCCTATGAA
TGTAAGGATTGTGGGAAGGCCTTTATTCTTGGCTCTCAACTTACTTACCATCAGAGAATTCATAGTGGTG
AGAAACCTTATGAGTGTAAGGAATGTGGAAAGGCCTTTATTCTTGGTTCACACCTTACATACCATCAGAG
AGTTCATACTGGTGAAAAGCCTTACATATGTAAAGAATGTGGGAAAGCCTTTTTATGTGCCTCCCAACTG
AATGAACATCAGAGAATTCATACAGGAGAGAAACCCTATGAATGTAAAGAATGCGGGAAGACCTTTTTTC
GTGGCTCACAACTTACTTACCACCTGAGAGTTCATTCAGGTGAGAGACCTTATAAATGCAAAGAATGTGG
GAAAGCCTTTATTTCTAATTCTAATCTTATTCAACATCAAAGAATTCATACCGGAGAGAAGCCCTACAAA
TGTAAGGAATGTGGAAAGGCCTTTATTTGTGGCAAACAACTTAGTGAACATCAGAGAATTCATACAGGTG
AGAAACCCTTTGAATGTAAGGAATGTGGAAAGGCCTTTATTCGTGTTGCATATCTTACTCAACATGAGAA
AATTCATGGTGAGAAACATTATGAATGTAAGGAATGTGGGAAGACCTTTGTACGTGCTACACAACTTACA
TATCATCAAAGAATTCATACAGGTGAAAAGCCCTACAAATGTAAGGAATGTGACAAGGCCTTTATTTATG
GCTCACAACTTAGTGAACATCAGAGAATTCACAGAGGTGAAAAACCTTATGAATGTAAACAGTGTGGGAA
GGCTTTTATTCGTGGCTCACACCTTACTGAACATCTGAGAACTCATACTGGAGAGAAACCCTATGAATGT
AAGGAATGTGGGAGGGCCTTTAGTCGTGGCTCAGAACTTACTCTGCATCAAAGGATCCATACTGGTGAGA
AACCCTATACATGTGTCCAGTGTGGTAAAGACTTTAGATGTCCTTCACAACTTACTCAACATACAAGGCT
TCATAATTGA

Translation (609 aa):
MPHLLVTFRDVAIDFSQEEWECLDPAQRDLYRDVMLENYSNLISLDLESSCVTKKLSPEKEIYEMESLQW
ENMGKRINHHLQYNGLGDNMECKGNLEGQEASQEGLYMCVKITCEEKATESHSTSSTFHRIIPTKEKLYK
CKECRQGFSYLSCLIQHEENHNIEKCSEVKKHRNTFSKKPSYIQHQRIQTGEKPYECMECGKAFGRTSDL
IQHQKIHTNEKPYQCNACGKAFIRGSQLTEHQRVHTGEKPYECKKCGKAFSYCSQYTLHQRIHSGEKPYE
CKDCGKAFILGSQLTYHQRIHSGEKPYECKECGKAFILGSHLTYHQRVHTGEKPYICKECGKAFLCASQL
NEHQRIHTGEKPYECKECGKTFFRGSQLTYHLRVHSGERPYKCKECGKAFISNSNLIQHQRIHTGEKPYK
CKECGKAFICGKQLSEHQRIHTGEKPFECKECGKAFIRVAYLTQHEKIHGEKHYECKECGKTFVRATQLT
YHQRIHTGEKPYKCKECDKAFIYGSQLSEHQRIHRGEKPYECKQCGKAFIRGSHLTEHLRTHTGEKPYEC
KECGRAFSRGSELTLHQRIHTGEKPYTCVQCGKDFRCPSQLTQHTRLHN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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