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Report for CCDS53915.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53915.1 Public Homo sapiens 14 CINP 24 110 108 CCDS HistoryNCBI Gene:51550Re-query CCDS DB by CCDS ID:53915.1Re-query CCDS DB by GeneID:51550See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 53915.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000541568.6 ENSP00000442377.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000541568.6Link to Ensembl Protein Viewer:ENSP00000442377.2Re-query CCDS DB by Nucleotide ID:ENST00000541568Re-query CCDS DB by Protein ID:ENSP00000442377
Original member Current member NCBI NM_001320046.2 NP_001306975.1 Accepted alive Link to Nucleotide Sequence:NM_001320046.2Link to Protein Sequence:NP_001306975.1Re-query CCDS DB by Nucleotide ID:NM_001320046Re-query CCDS DB by Protein ID:NP_001306975Link to BLAST:NP_001306975.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001306975.1 118 Q9BW66-2 118 100% 0 0

Chromosomal Locations for CCDS 53915.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 102348709 102348759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 102355768 102355897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 102359419 102359587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 102362845 102362851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (357 nt):
ATGGAAGCAAAGACTCTTGGAACTGTAACGCCCAGAAAACCTGTCTTATCTGTCAGTGCAAGAAAAATTA
AGGACAATGCGGCTGATTGGCACAATTTAATCCTGAAGTGGGAAACCCTCAATGATGCAGGTTTTACCAC
TGCAAATAATATTGCCAACTTGAAAATCAGTTTATTGAATAAAGACAAGATAGAACTAGACAGCAGCAGC
CCAGCCTCGAAGGAAAATGAAGAAAAGGTGTGTCTGGAATATAACGAGGAACTGGAGAAGCTGTGTGAGG
AACTGCAGGCCACCTTGGATGGGTTGATGAGGTTTCGCATAAGCTCTTGGAGATGTACAGGAAGGAGCTG
CTCCTGA

Translation (118 aa):
MEAKTLGTVTPRKPVLSVSARKIKDNAADWHNLILKWETLNDAGFTTANNIANLKISLLNKDKIELDSSS
PASKENEEKVCLEYNEELEKLCEELQATLDGLMRFRISSWRCTGRSCS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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