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Report for CCDS4960.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4960.1 Public Homo sapiens 6 ZNF451 24 110 108 CCDS HistoryNCBI Gene:26036Re-query CCDS DB by CCDS ID:4960.1Re-query CCDS DB by GeneID:26036See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4960.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357489.7 ENSP00000350083.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000357489.7Link to Ensembl Protein Viewer:ENSP00000350083.3Re-query CCDS DB by Nucleotide ID:ENST00000357489Re-query CCDS DB by Protein ID:ENSP00000350083
Original member Current member NCBI NM_015555.3 NP_056370.2 Accepted alive Link to Nucleotide Sequence:NM_015555.3Link to Protein Sequence:NP_056370.2Re-query CCDS DB by Nucleotide ID:NM_015555Re-query CCDS DB by Protein ID:NP_056370Link to BLAST:NP_056370.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056370.2 1013 Q9Y4E5-2 1013 100% 0 0

Chromosomal Locations for CCDS 4960.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 57090254 57090274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 57090811 57090894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 57099061 57099141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 57124734 57124859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 57128729 57128840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 57133042 57133192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 57134744 57134870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 57141302 57141455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 57141948 57142095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 57147090 57148693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 57152221 57152351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 57153861 57154047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 57161084 57161152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 57168423 57168469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3042 nt):
ATGGGAGACCCGGGGTCGGAGATAATAGAATCTGTCCCTCCAGCTGGCCCTGAGGCATCTGAGTCAACAA
CGGATGAAAATGAAGACGACATTCAGTTTGTCAGTGAAGGACCATTACGACCTGTTCTTGAATACATTGA
TCTGGTCAGCAGTGATGATGAAGAGCCTAGCACCTCTTATACTGATGAGAATATTAAACGTAAAGACCAT
ATTGATTATCAGAAGGATAAAGTTGCTTTAACTCTGGCTCGTCTAGCCCGCCATGTTGAAGTGGAGAAAC
AGCAGAAAGAAGAGAAGAATAGAGCATTCAGAGAAAAAATTGATTTTCAGCATGCTCATGGGTTACAAGA
ATTGGAATTTATTCGAGGACATTCTGATACAGAAGCAGCAAGACTGTGTGTGGACCAGTGGCTAAAAATG
CCAGGACTCAAAACAGGCACAATTAATTGTGGAACAAAAAGTTCATTCCGAAGAGGAGGCCACACGTGGG
TGTCTGGGAAACCAATTTTATGTCCTATAATGCACTGTAACAAGGAGTTTGACAATGGGCACCTTCTCTT
AGGACATTTGAAAAGGTTCGATCACTCTCCATGTGATCCAACAATTACACTACATGGACCTTTCTTCAGC
TCCTTTGCTTGTGTAGTATGTTATAAAAAATTTGTTACTCAACAACAATATAGAGATCACCTTTTTGATA
AGGAAGCCACAGATGATGGACATAACAACAACCTTCTTCCTCAGATTATTCAGTGTTTTGCATGTCCAAA
TTGCTTCCTTCTTTTTAGCAGAAAGGAGGAGTGTTCAAAGCATATGTCTGGAAAGAATCATTTCCATCAG
AGTTTCAAACTGGGTGATAACAAAGGAATTGCACATCCAATATCTTTCCCATCTTTTGCAAAGAAACTTT
TGATCTCTCTGTGCAAAGATGTTCCCTTTCAAGTTAAGTGTGTGGCCTGCCACAAGACACTGCGTTCCCA
CATGGAGCTCACTGCCCATTTCAGAGTTCATTGTCGAAATGCTGGACCTGTAGCTGTAGCTGAGAAGAGC
ATTACCCAGGTTGCAGAGAAATTCATATTAAGAGGTTATTGTCCAGATTGCAATCAAGTCTTTGTGGATG
AAACCAGCACCCAAAATCATAAGCAGAATTCAGGACACAAAGTCCGAGTCATTAACTCAGTGGAAGAATC
AGTCTTACTCTATTGCCACAGCAGCGAAGGGAACAAGGATCCTTCTTCTGACTTGCATTTATTGTTGGAT
CAATCAAAATTTTCATCACTTAAAAGAACCATGTCTATTAAAGAATCTAGCTCACTGGAGTGCATTGCCA
TTCCAAAAAAGAAGATGAATTTAAAAGATAAAAGCCATGAAGGTGTTGCTTGTGTCCAGAAAGAAAAATC
AGTAGTTAAAACCTGGTTCTGTGAATGCAATCAGCGATTCCCAAGTGAAGATGCAGTAGAAAAGCATGTT
TTCTCAGCAAACACAATGGGTTATAAATGTGTGGTCTGTGGAAAGGTATGTGATGATTCAGGGGTCATTC
GTTTACACATGAGCCGGATTCACGGAGGGGCACATTTAAATAACTTTCTTTTCTGGTGTCGGACATGCAA
AAAGGAGTTAACAAGGAAAGATACTATCATGGCACATGTGACTGAATTTCATAATGGACACAGATATTTT
TATGAGATGGATGAGGTAGAAGGTGAAACTTTGCCATCATCCTCTACAACATTGGATAATTTGACTGCTA
ACAAGCCTTCATCAGCTATTACTGTTATTGATCATTCCCCGGCAAATAGTTCTCCGAGGGGTAAATGGCA
ATGCCGGATTTGTGAAGATATGTTTGATTCCCAGGAATATGTAAAACAGCACTGCATGTCTTTGGCAAGC
CACAAGTTTCATAGATACAGCTGTGCTCACTGCAGAAAGCCTTTTCATAAGATAGAAACATTGTACCGAC
ATTGCCAAGATGAGCATGACAATGAGATAAAGATTAAATACTTCTGTGGGCTTTGTGATCTTATCTTTAA
TGTGGAAGAAGCATTTCTGAGTCATTATGAGGAGCACCACAGCATAGATTATGTATTTGTGTCAGAAAAA
ACTGAAACTTCAATTAAAACCGAAGATGATTTTCCAGTAATAGAGACCAGTAACCAGTTAACTTGTGGTT
GCCGTGAGAGTTACATCTGTAAAGTCAACAGAAAAGAAGATTATAGCAGATGTCTCCAAATCATGCTGGA
TAAAGGAAAACTGTGGTTTCGCTGCAGTTTATGTTCGGCAACAGCACAGAATTTAACCGACATGAACACT
CATATCCATCAAGTGCACAAAGAAAAGAGTGATGAGGAGGAGCAGCAGTATGTAATCAAGTGTGGCACCT
GCACCAAAGCATTTCATGATCCTGAGAGTGCACAGCAGCATTTCCATAGAAAACATTGCTTCTTACAGAA
ACCCAGTGTGGCTCATTTTGGATCTGAAAAATCAAACCTGTACAAGTTTACTGCTAGTGCCTCACATACA
GAGAGAAAACTGAAACAGGCAATAAACTATTCAAAAAGTTTAGACATGGAGAAAGGAGTTGAGAATGACC
TAAGCTATCAGAATATAGGAGGAAACACCAATTGGAAGCCTCCGCTCAACTGTAAGATTTATAACTACCT
GAACAGGATTGGATGCTTCTTCCTTCATCCTCGCTGTAGTAAAAGAAAAGATGCTGCTGATTTTGCCATA
TGTATGCATGCTGGCCGTCTAGATGAACAACTACCCAAGCAAATTCCTTTCACCATCCTCTCAGGAGATC
AAGGTTTTCTGGAGCTAGAGAATCAATTTAAGAAGACTCAGAGGCCAGCTCATATACTAAACCCTCACCA
CTTAGAGGGAGATATGATGTGTGCCTTGTTAAATAGCATATCTGATACCACCAAAGAATGTGACAGTGAT
GATAACATGGGTGCCAAAAATACTTCAATAGGAGAAGAATTTATATCCACAGAAGATGTGGAATTAGAAG
AAGCTATTAGAAGAAGTCTTGAGGAAATGTAA

Translation (1013 aa):
MGDPGSEIIESVPPAGPEASESTTDENEDDIQFVSEGPLRPVLEYIDLVSSDDEEPSTSYTDENIKRKDH
IDYQKDKVALTLARLARHVEVEKQQKEEKNRAFREKIDFQHAHGLQELEFIRGHSDTEAARLCVDQWLKM
PGLKTGTINCGTKSSFRRGGHTWVSGKPILCPIMHCNKEFDNGHLLLGHLKRFDHSPCDPTITLHGPFFS
SFACVVCYKKFVTQQQYRDHLFDKEATDDGHNNNLLPQIIQCFACPNCFLLFSRKEECSKHMSGKNHFHQ
SFKLGDNKGIAHPISFPSFAKKLLISLCKDVPFQVKCVACHKTLRSHMELTAHFRVHCRNAGPVAVAEKS
ITQVAEKFILRGYCPDCNQVFVDETSTQNHKQNSGHKVRVINSVEESVLLYCHSSEGNKDPSSDLHLLLD
QSKFSSLKRTMSIKESSSLECIAIPKKKMNLKDKSHEGVACVQKEKSVVKTWFCECNQRFPSEDAVEKHV
FSANTMGYKCVVCGKVCDDSGVIRLHMSRIHGGAHLNNFLFWCRTCKKELTRKDTIMAHVTEFHNGHRYF
YEMDEVEGETLPSSSTTLDNLTANKPSSAITVIDHSPANSSPRGKWQCRICEDMFDSQEYVKQHCMSLAS
HKFHRYSCAHCRKPFHKIETLYRHCQDEHDNEIKIKYFCGLCDLIFNVEEAFLSHYEEHHSIDYVFVSEK
TETSIKTEDDFPVIETSNQLTCGCRESYICKVNRKEDYSRCLQIMLDKGKLWFRCSLCSATAQNLTDMNT
HIHQVHKEKSDEEEQQYVIKCGTCTKAFHDPESAQQHFHRKHCFLQKPSVAHFGSEKSNLYKFTASASHT
ERKLKQAINYSKSLDMEKGVENDLSYQNIGGNTNWKPPLNCKIYNYLNRIGCFFLHPRCSKRKDAADFAI
CMHAGRLDEQLPKQIPFTILSGDQGFLELENQFKKTQRPAHILNPHHLEGDMMCALLNSISDTTKECDSD
DNMGAKNTSIGEEFISTEDVELEEAIRRSLEEM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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