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Report for CCDS14633.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14633.1 Public Homo sapiens X MBNL3 24 110 108 CCDS HistoryNCBI Gene:55796Re-query CCDS DB by CCDS ID:14633.1Re-query CCDS DB by GeneID:55796See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14633.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370853.8 ENSP00000359890.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370853.8Link to Ensembl Protein Viewer:ENSP00000359890.3Re-query CCDS DB by Nucleotide ID:ENST00000370853Re-query CCDS DB by Protein ID:ENSP00000359890
Original member Current member EBI ENST00000698664.1 ENSP00000513866.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000698664.1Link to Ensembl Protein Viewer:ENSP00000513866.1Re-query CCDS DB by Nucleotide ID:ENST00000698664Re-query CCDS DB by Protein ID:ENSP00000513866
Original member Current member NCBI NM_001386889.1 NP_001373818.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001386889.1Link to Protein Sequence:NP_001373818.1Re-query CCDS DB by Nucleotide ID:NM_001386889Re-query CCDS DB by Protein ID:NP_001373818Link to BLAST:NP_001373818.1
Original member Current member NCBI NM_001386894.1 NP_001373823.1 Accepted alive Link to Nucleotide Sequence:NM_001386894.1Link to Protein Sequence:NP_001373823.1Re-query CCDS DB by Nucleotide ID:NM_001386894Re-query CCDS DB by Protein ID:NP_001373823Link to BLAST:NP_001373823.1
Original member Current member NCBI NM_001386896.1 NP_001373825.1 Accepted alive Link to Nucleotide Sequence:NM_001386896.1Link to Protein Sequence:NP_001373825.1Re-query CCDS DB by Nucleotide ID:NM_001386896Re-query CCDS DB by Protein ID:NP_001373825Link to BLAST:NP_001373825.1
Original member Current member NCBI NM_001386897.1 NP_001373826.1 Accepted alive Link to Nucleotide Sequence:NM_001386897.1Link to Protein Sequence:NP_001373826.1Re-query CCDS DB by Nucleotide ID:NM_001386897Re-query CCDS DB by Protein ID:NP_001373826Link to BLAST:NP_001373826.1
Original member Current member NCBI NM_018388.4 NP_060858.2 Accepted alive Link to Nucleotide Sequence:NM_018388.4Link to Protein Sequence:NP_060858.2Re-query CCDS DB by Nucleotide ID:NM_018388Re-query CCDS DB by Protein ID:NP_060858Link to BLAST:NP_060858.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001373818.1 354 Q9NUK0-1 354 100% 0 0
NP_001373823.1 354 Q9NUK0-1 354 100% 0 0
NP_001373825.1 354 Q9NUK0-1 354 100% 0 0
NP_001373826.1 354 Q9NUK0-1 354 100% 0 0
NP_060858.2 354 Q9NUK0-1 354 100% 0 0

Chromosomal Locations for CCDS 14633.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 132379666 132379677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 132382178 132382272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 132384663 132384698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 132386661 132386811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 132390847 132391083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 132392143 132392334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 132406228 132406392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 132439435 132439611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1065 nt):
ATGACGGCTGTCAATGTTGCCCTGATTCGTGATACCAAGTGGCTGACTTTAGAAGTCTGTAGAGAATTTC
AGAGAGGAACTTGCTCTCGAGCTGATGCAGATTGCAAGTTTGCCCATCCACCAAGAGTTTGCCATGTGGA
AAATGGTCGTGTGGTGGCCTGTTTTGATTCTCTAAAGGGTCGGTGTACCCGAGAGAACTGCAAGTACCTT
CACCCTCCTCCACACTTAAAAACGCAGCTGGAGATTAATGGGCGGAACAATCTGATTCAACAGAAGACTG
CCGCAGCCATGTTCGCCCAGCAGATGCAGCTTATGCTCCAAAACGCTCAAATGTCATCACTTGGTTCTTT
TCCTATGACTCCATCAATTCCAGCTAATCCTCCCATGGCTTTCAATCCTTACATACCACATCCTGGGATG
GGCCTCGTTCCTGCAGAACTTGTACCAAATACACCTGTTCTGATTCCTGGAAACCCACCTCTTGCAATGC
CAGGAGCTGTTGGCCCAAAACTGATGCGTTCAGATAAACTGGAGGTTTGCCGAGAATTTCAGCGTGGAAA
TTGTACCCGTGGGGAGAATGATTGCCGCTATGCTCACCCTACTGATGCTTCCATGATTGAAGCGAGTGAT
AATACTGTGACAATCTGCATGGATTACATCAAAGGTCGATGCTCGCGGGAGAAATGCAAGTACTTTCATC
CTCCTGCACACTTGCAAGCCAGACTCAAGGCAGCTCATCATCAGATGAACCATTCAGCTGCCTCTGCCAT
GGCCCTGCAGCCTGGTACACTGCAACTGATACCAAAGAGATCAGCACTGGAAAAGCCCAATGGTGCCACC
CCGGTCTTTAATCCCACTGTTTTCCACTGCCAACAGGCTCTGACTAACCTGCAGCTCCCACAGCCGGCAT
TTATCCCTGCAGGGCCAATACTGTGCATGGCACCCGCTTCAAATATTGTGCCCATGATGCACGGTGCTAC
ACCTACCACTGTGTCTGCAGCAACAACACCTGCCACCAGCGTTCCGTTCGCTGCACCAACTACAGGCAAT
CAGCTGAAATTCTGA

Translation (354 aa):
MTAVNVALIRDTKWLTLEVCREFQRGTCSRADADCKFAHPPRVCHVENGRVVACFDSLKGRCTRENCKYL
HPPPHLKTQLEINGRNNLIQQKTAAAMFAQQMQLMLQNAQMSSLGSFPMTPSIPANPPMAFNPYIPHPGM
GLVPAELVPNTPVLIPGNPPLAMPGAVGPKLMRSDKLEVCREFQRGNCTRGENDCRYAHPTDASMIEASD
NTVTICMDYIKGRCSREKCKYFHPPAHLQARLKAAHHQMNHSAASAMALQPGTLQLIPKRSALEKPNGAT
PVFNPTVFHCQQALTNLQLPQPAFIPAGPILCMAPASNIVPMMHGATPTTVSAATTPATSVPFAAPTTGN
QLKF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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