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Report for CCDS12210.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12210.1 Public Homo sapiens 19 ZNF317 24 110 108 CCDS HistoryNCBI Gene:57693Re-query CCDS DB by CCDS ID:12210.1Re-query CCDS DB by GeneID:57693See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12210.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000247956.11 ENSP00000247956.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000247956.11Link to Ensembl Protein Viewer:ENSP00000247956.5Re-query CCDS DB by Nucleotide ID:ENST00000247956Re-query CCDS DB by Protein ID:ENSP00000247956
Original member Current member NCBI NM_020933.5 NP_065984.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020933.5Link to Protein Sequence:NP_065984.3Re-query CCDS DB by Nucleotide ID:NM_020933Re-query CCDS DB by Protein ID:NP_065984Link to BLAST:NP_065984.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065984.3 595 Q96PQ6-1 595 100% 0 0

Chromosomal Locations for CCDS 12210.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 9156017 9156041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 9156612 9156748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 9157268 9157394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 9157980 9158075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 9158826 9158908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 9160114 9161433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1788 nt):
ATGGCAGCTCTGTCCCCCACATTTGCCACGTCCACCCAGGATTCCACCTGTCTCCAGGACTCAGAATTTC
CTGTTTCTTCAAAAGACCATTCCTGTCCCCAGAATTTGGACCTGTTCGTGTGCAGTGGTCTGGAGCCTCA
CACACCCAGTGTTGGTTCCCAGGAATCGGTGACTTTCCAAGATGTCGCTGTGGACTTTACCGAGAAGGAG
TGGCCCTTGCTGGATTCTTCTCAGAGAAAACTGTACAAAGATGTAATGCTGGAGAACTACAGCAACCTCA
CTTCACTGGGGTATCAGGTCGGCAAACCCAGCCTCATCTCACACTTGGAGCAGGAGGAGGAGCCGAGGAC
AGAGGAGAGGGGCGCTCACCAGGGCGCTTGTGCAGATTGGGAGACTCCATCTAAAACCAAGTGGTCACTT
CTTATGGAAGATATTTTTGGGAAGGAAACGCCCAGTGGTGTGACGATGGAAAGAGCCGGTCTTGGAGAGA
AGTCCACTGAATACGCTCACTTGTTCGAAGTCTTTGGCATGGACCCTCATCTCACTCAGCCAATGGGAAG
GCACGCTGGCAAGAGGCCCTATCACCGCCGCGACTATGGGGTAGCGTTCAAGGGCAGGCCGCACCTCACT
CAGCACATGAGCATGTACGACGGGAGAAAAATGCATGAATGTCATCAGTGCCAAAAAGCCTTCACCACGA
GCGCGTCCCTCACACGGCACAGGAGAATCCACACCGGGGAGAAGCCTTACGAGTGCAGCGACTGCGGGAA
AGCCTTCAACGACCCTTCAGCCCTTAGGAGCCACGCAAGAACTCACCTCAAAGAGAAGCCCTTTGACTGC
AGTCAGTGTGGAAATGCATTCCGGACCCTCTCGGCCCTGAAAATCCACATGCGAGTTCACACTGGCGAGA
GGCCTTACAAGTGTGATCAGTGCGGGAAGGCTTACGGCCGGAGCTGCCACCTCATCGCACACAAGAGAAC
GCACACCGGAGAGAGGCCCTACGAGTGTCACGACTGTGGGAAAGCTTTCCAGCACCCCTCCCACCTCAAA
GAGCACGTGAGGAATCACACGGGGGAGAAGCCCTACGCGTGCACGCAGTGCGGCAAAGCCTTCCGCTGGA
AGTCCAACTTTAATTTGCACAAGAAGAACCACATGGTGGAGAAGACCTACGAATGTAAAGAATGCGGGAA
ATCCTTTGGCGATCTCGTGTCCCGGAGGAAACACATGAGGATTCACATCGTCAAGAAACCCGTGGAATGT
CGGCAGTGCGGGAAGACCTTCCGAAACCAGTCCATCCTTAAGACTCACATGAACTCTCACACTGGAGAGA
AACCATACGGGTGCGATCTCTGCGGGAAAGCTTTCAGCGCGAGTTCAAACCTCACCGCACACAGGAAGAT
ACACACGCAAGAGAGACGCTACGAATGCGCCGCCTGCGGGAAAGTCTTCGGTGACTATTTATCCCGGCGG
AGGCACATGAGCGTTCACCTTGTAAAGAAACGAGTTGAGTGTAGGCAGTGTGGCAAGGCCTTCAGGAACC
AGTCAACGCTGAAGACGCACATGCGAAGCCACACGGGGGAGAAACCGTACGAATGCGATCACTGTGGGAA
GGCCTTCAGCATAGGCTCCAACCTGAATGTGCACAGGCGGATCCACACCGGGGAGAAGCCCTACGAATGC
CTTGTCTGCGGGAAAGCCTTCAGCGACCACTCATCCCTCAGGAGCCACGTGAAAACTCACCGGGGAGAGA
AGCTCTTTGTGTCATCCGTGTGGAAAAGGCTCCAGTGA

Translation (595 aa):
MAALSPTFATSTQDSTCLQDSEFPVSSKDHSCPQNLDLFVCSGLEPHTPSVGSQESVTFQDVAVDFTEKE
WPLLDSSQRKLYKDVMLENYSNLTSLGYQVGKPSLISHLEQEEEPRTEERGAHQGACADWETPSKTKWSL
LMEDIFGKETPSGVTMERAGLGEKSTEYAHLFEVFGMDPHLTQPMGRHAGKRPYHRRDYGVAFKGRPHLT
QHMSMYDGRKMHECHQCQKAFTTSASLTRHRRIHTGEKPYECSDCGKAFNDPSALRSHARTHLKEKPFDC
SQCGNAFRTLSALKIHMRVHTGERPYKCDQCGKAYGRSCHLIAHKRTHTGERPYECHDCGKAFQHPSHLK
EHVRNHTGEKPYACTQCGKAFRWKSNFNLHKKNHMVEKTYECKECGKSFGDLVSRRKHMRIHIVKKPVEC
RQCGKTFRNQSILKTHMNSHTGEKPYGCDLCGKAFSASSNLTAHRKIHTQERRYECAACGKVFGDYLSRR
RHMSVHLVKKRVECRQCGKAFRNQSTLKTHMRSHTGEKPYECDHCGKAFSIGSNLNVHRRIHTGEKPYEC
LVCGKAFSDHSSLRSHVKTHRGEKLFVSSVWKRLQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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