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Report for CCDS63234.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
63234.1 Public Homo sapiens 20 ZNF133 24 110 108 CCDS HistoryNCBI Gene:7692Re-query CCDS DB by CCDS ID:63234.1Re-query CCDS DB by GeneID:7692See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 63234.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000316358.8 ENSP00000346090.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000316358.8Link to Ensembl Protein Viewer:ENSP00000346090.3Re-query CCDS DB by Nucleotide ID:ENST00000316358Re-query CCDS DB by Protein ID:ENSP00000346090
Original member Current member EBI ENST00000401790.6 ENSP00000383945.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000401790.6Link to Ensembl Protein Viewer:ENSP00000383945.1Re-query CCDS DB by Nucleotide ID:ENST00000401790Re-query CCDS DB by Protein ID:ENSP00000383945
Original member Current member EBI ENST00000425686.3 ENSP00000406638.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000425686.3Link to Ensembl Protein Viewer:ENSP00000406638.2Re-query CCDS DB by Nucleotide ID:ENST00000425686Re-query CCDS DB by Protein ID:ENSP00000406638
Original member Current member EBI ENST00000622607.4 ENSP00000481326.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000622607.4Link to Ensembl Protein Viewer:ENSP00000481326.1Re-query CCDS DB by Nucleotide ID:ENST00000622607Re-query CCDS DB by Protein ID:ENSP00000481326
Original member Current member EBI ENST00000698698.1 ENSP00000513879.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000698698.1Link to Ensembl Protein Viewer:ENSP00000513879.1Re-query CCDS DB by Nucleotide ID:ENST00000698698Re-query CCDS DB by Protein ID:ENSP00000513879
Original member Current member EBI ENST00000698699.1 ENSP00000513880.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000698699.1Link to Ensembl Protein Viewer:ENSP00000513880.1Re-query CCDS DB by Nucleotide ID:ENST00000698699Re-query CCDS DB by Protein ID:ENSP00000513880
Original member Current member EBI ENST00000698704.1 ENSP00000513883.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000698704.1Link to Ensembl Protein Viewer:ENSP00000513883.1Re-query CCDS DB by Nucleotide ID:ENST00000698704Re-query CCDS DB by Protein ID:ENSP00000513883
Original member Current member EBI ENST00000698705.1 ENSP00000513884.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000698705.1Link to Ensembl Protein Viewer:ENSP00000513884.1Re-query CCDS DB by Nucleotide ID:ENST00000698705Re-query CCDS DB by Protein ID:ENSP00000513884
Original member Current member NCBI NM_001282997.3 NP_001269926.2 Accepted alive Link to Nucleotide Sequence:NM_001282997.3Link to Protein Sequence:NP_001269926.2Re-query CCDS DB by Nucleotide ID:NM_001282997Re-query CCDS DB by Protein ID:NP_001269926Link to BLAST:NP_001269926.2
Original member Current member NCBI NM_001282998.3 NP_001269927.2 Accepted alive Link to Nucleotide Sequence:NM_001282998.3Link to Protein Sequence:NP_001269927.2Re-query CCDS DB by Nucleotide ID:NM_001282998Re-query CCDS DB by Protein ID:NP_001269927Link to BLAST:NP_001269927.2
Original member Current member NCBI NM_001282999.3 NP_001269928.2 Accepted alive Link to Nucleotide Sequence:NM_001282999.3Link to Protein Sequence:NP_001269928.2Re-query CCDS DB by Nucleotide ID:NM_001282999Re-query CCDS DB by Protein ID:NP_001269928Link to BLAST:NP_001269928.2
Original member Current member NCBI NM_001283000.3 NP_001269929.2 Accepted alive Link to Nucleotide Sequence:NM_001283000.3Link to Protein Sequence:NP_001269929.2Re-query CCDS DB by Nucleotide ID:NM_001283000Re-query CCDS DB by Protein ID:NP_001269929Link to BLAST:NP_001269929.2
Original member Current member NCBI NM_001283001.3 NP_001269930.2 Accepted alive Link to Nucleotide Sequence:NM_001283001.3Link to Protein Sequence:NP_001269930.2Re-query CCDS DB by Nucleotide ID:NM_001283001Re-query CCDS DB by Protein ID:NP_001269930Link to BLAST:NP_001269930.2
Original member Current member NCBI NM_001352452.2 NP_001339381.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001352452.2Link to Protein Sequence:NP_001339381.2Re-query CCDS DB by Nucleotide ID:NM_001352452Re-query CCDS DB by Protein ID:NP_001339381Link to BLAST:NP_001339381.2
Original member Current member NCBI NM_001352454.2 NP_001339383.2 Accepted alive Link to Nucleotide Sequence:NM_001352454.2Link to Protein Sequence:NP_001339383.2Re-query CCDS DB by Nucleotide ID:NM_001352454Re-query CCDS DB by Protein ID:NP_001339383Link to BLAST:NP_001339383.2
Original member Current member NCBI NM_001352455.2 NP_001339384.2 Accepted alive Link to Nucleotide Sequence:NM_001352455.2Link to Protein Sequence:NP_001339384.2Re-query CCDS DB by Nucleotide ID:NM_001352455Re-query CCDS DB by Protein ID:NP_001339384Link to BLAST:NP_001339384.2
Original member Current member NCBI NM_001352463.2 NP_001339392.2 Accepted alive Link to Nucleotide Sequence:NM_001352463.2Link to Protein Sequence:NP_001339392.2Re-query CCDS DB by Nucleotide ID:NM_001352463Re-query CCDS DB by Protein ID:NP_001339392Link to BLAST:NP_001339392.2
Original member Current member NCBI NM_001352464.2 NP_001339393.2 Accepted alive Link to Nucleotide Sequence:NM_001352464.2Link to Protein Sequence:NP_001339393.2Re-query CCDS DB by Nucleotide ID:NM_001352464Re-query CCDS DB by Protein ID:NP_001339393Link to BLAST:NP_001339393.2
Original member Current member NCBI NM_001387298.1 NP_001374227.1 Accepted alive Link to Nucleotide Sequence:NM_001387298.1Link to Protein Sequence:NP_001374227.1Re-query CCDS DB by Nucleotide ID:NM_001387298Re-query CCDS DB by Protein ID:NP_001374227Link to BLAST:NP_001374227.1
Original member Current member NCBI NM_001387299.1 NP_001374228.1 Accepted alive Link to Nucleotide Sequence:NM_001387299.1Link to Protein Sequence:NP_001374228.1Re-query CCDS DB by Nucleotide ID:NM_001387299Re-query CCDS DB by Protein ID:NP_001374228Link to BLAST:NP_001374228.1
Original member Current member NCBI NM_001387300.1 NP_001374229.1 Accepted alive Link to Nucleotide Sequence:NM_001387300.1Link to Protein Sequence:NP_001374229.1Re-query CCDS DB by Nucleotide ID:NM_001387300Re-query CCDS DB by Protein ID:NP_001374229Link to BLAST:NP_001374229.1
Original member Current member NCBI NM_001387301.1 NP_001374230.1 Accepted alive Link to Nucleotide Sequence:NM_001387301.1Link to Protein Sequence:NP_001374230.1Re-query CCDS DB by Nucleotide ID:NM_001387301Re-query CCDS DB by Protein ID:NP_001374230Link to BLAST:NP_001374230.1
Original member Current member NCBI NM_001387302.1 NP_001374231.1 Accepted alive Link to Nucleotide Sequence:NM_001387302.1Link to Protein Sequence:NP_001374231.1Re-query CCDS DB by Nucleotide ID:NM_001387302Re-query CCDS DB by Protein ID:NP_001374231Link to BLAST:NP_001374231.1
Original member Current member NCBI NM_001387303.1 NP_001374232.1 Accepted alive Link to Nucleotide Sequence:NM_001387303.1Link to Protein Sequence:NP_001374232.1Re-query CCDS DB by Nucleotide ID:NM_001387303Re-query CCDS DB by Protein ID:NP_001374232Link to BLAST:NP_001374232.1
Original member Current member NCBI NM_001387304.1 NP_001374233.1 Accepted alive Link to Nucleotide Sequence:NM_001387304.1Link to Protein Sequence:NP_001374233.1Re-query CCDS DB by Nucleotide ID:NM_001387304Re-query CCDS DB by Protein ID:NP_001374233Link to BLAST:NP_001374233.1
Original member Current member NCBI NM_001387305.1 NP_001374234.1 Accepted alive Link to Nucleotide Sequence:NM_001387305.1Link to Protein Sequence:NP_001374234.1Re-query CCDS DB by Nucleotide ID:NM_001387305Re-query CCDS DB by Protein ID:NP_001374234Link to BLAST:NP_001374234.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269926.2 654 P52736-1 654 100% 0 0
NP_001269927.2 654 P52736-1 654 100% 0 0
NP_001269928.2 654 P52736-1 654 100% 0 0
NP_001269929.2 654 P52736-1 654 100% 0 0
NP_001269930.2 654 P52736-1 654 100% 0 0
NP_001339381.2 654 P52736-1 654 100% 0 0
NP_001339383.2 654 P52736-1 654 100% 0 0
NP_001339384.2 654 P52736-1 654 100% 0 0
NP_001339392.2 654 P52736-1 654 100% 0 0
NP_001339393.2 654 P52736-1 654 100% 0 0
NP_001374227.1 654 P52736-1 654 100% 0 0
NP_001374228.1 654 P52736-1 654 100% 0 0
NP_001374229.1 654 P52736-1 654 100% 0 0
NP_001374230.1 654 P52736-1 654 100% 0 0
NP_001374231.1 654 P52736-1 654 100% 0 0
NP_001374232.1 654 P52736-1 654 100% 0 0
NP_001374233.1 654 P52736-1 654 100% 0 0
NP_001374234.1 654 P52736-1 654 100% 0 0

Chromosomal Locations for CCDS 63234.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 18305687 18305807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18306298 18306393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 18315069 18316816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1965 nt):
ATGGCATTCAGGGATGTGGCTGTGGATTTCACCCAGGATGAGTGGAGGCTGCTGAGCCCTGCTCAAAGGA
CTCTGTACAGAGAGGTGATGCTGGAGAACTACAGCAACCTGGTCTCACTGGGAATTTCATTTTCTAAACC
AGAACTCATCACCCAGCTGGAGCAAGGGAAAGAGACCTGGAGAGAGGAAAAAAAATGTTCACCGGCAACC
TGTCCAGCAGATCCAGAGCCAGAGCTCTACCTCGATCCTTTCTGCCCTCCGGGTTTCTCCAGTCAGAAAT
TCCCCATGCAGCATGTGCTGTGTAATCATCCCCCCTGGATCTTCACATGCTTGTGTGCAGAAGGTAACAT
CCAGCCTGGGGATCCGGGCCCAGGGGACCAGGAGAAGCAGCAACAAGCCTCTGAGGGGAGACCCTGGAGT
GATCAAGCAGAAGGTCCTGAGGGAGAAGGTGCCATGCCTTTGTTTGGAAGAACCAAGAAAAGGACTCTGG
GAGCGTTCTCCAGGCCACCCCAGAGGCAGCCAGTCAGCTCTCGGAACGGCCTCAGAGGGGTGGAGTTAGA
AGCCAGCCCAGCTCAGTCAGGGAACCCTGAGGAAACAGACAAATTGTTGAAGAGGATAGAAGTCTTAGGA
TTTGGAACAGTCAACTGTGGAGAGTGTGGACTGAGCTTCAGCAAGATGACAAACCTGCTCAGTCACCAGC
GGATACACTCAGGGGAGAAGCCCTACGTGTGTGGGGTATGTGAGAAGGGCTTCAGCCTAAAGAAGAGCCT
CGCCAGACACCAGAAGGCACACTCGGGGGAGAAGCCAATTGTGTGCAGGGAGTGTGGACGAGGCTTTAAC
CGGAAGTCAACGCTAATCATACACGAACGGACACACTCCGGTGAGAAACCTTACATGTGCAGTGAGTGTG
GGCGAGGCTTCAGCCAGAAGTCAAACCTCATCATACACCAGAGGACACACTCAGGGGAAAAGCCTTACGT
GTGCCGGGAATGTGGCAAAGGCTTCAGCCAGAAGTCAGCTGTCGTGAGACACCAGAGGACACACTTGGAG
GAGAAGACCATCGTGTGCAGTGACTGTGGCCTGGGCTTCAGCGACAGGTCAAACCTCATCTCCCACCAGA
GGACGCACTCTGGGGAGAAGCCCTACGCCTGCAAGGAGTGTGGGCGATGCTTCAGGCAGAGGACCACCCT
TGTCAACCACCAGAGGACACACTCAAAGGAGAAGCCCTATGTGTGCGGGGTGTGTGGGCACAGCTTCAGC
CAGAATTCAACCCTCATCTCTCACAGGCGGACACACACTGGGGAGAAGCCGTATGTTTGTGGGGTGTGTG
GGCGAGGCTTTAGTCTCAAGTCACACCTCAACAGACACCAGAACATACACTCAGGAGAGAAGCCCATTGT
GTGCAAGGACTGTGGCCGGGGCTTCAGCCAGCAATCCAACCTCATCAGACACCAGAGGACGCACTCAGGC
GAGAAGCCCATGGTGTGTGGGGAGTGCGGGCGAGGCTTCAGCCAGAAGTCAAACCTTGTTGCACACCAGA
GGACGCACTCAGGGGAGAGGCCGTATGTGTGCCGAGAGTGCGGGCGAGGCTTTAGCCACCAGGCCGGTCT
CATCAGGCACAAGCGGAAGCACTCGAGGGAGAAGCCCTACATGTGCAGGCAGTGTGGACTGGGCTTTGGC
AATAAGTCAGCTCTAATTACACACAAGCGGGCTCACTCGGAAGAGAAGCCTTGTGTGTGCAGAGAGTGTG
GCCAAGGCTTTCTCCAAAAGTCACACCTCACCTTACATCAAATGACACATACGGGGGAGAAGCCATATGT
GTGCAAGACGTGTGGGCGGGGCTTCAGCCTCAAGTCTCACCTCAGCAGACACAGGAAGACCACGTCTGTC
CACCACAGACTGCCAGTGCAGCCCGACCCTGAGCCGTGTGCAGGGCAACCTTCGGATTCCTTATACTCTC
TCTGA

Translation (654 aa):
MAFRDVAVDFTQDEWRLLSPAQRTLYREVMLENYSNLVSLGISFSKPELITQLEQGKETWREEKKCSPAT
CPADPEPELYLDPFCPPGFSSQKFPMQHVLCNHPPWIFTCLCAEGNIQPGDPGPGDQEKQQQASEGRPWS
DQAEGPEGEGAMPLFGRTKKRTLGAFSRPPQRQPVSSRNGLRGVELEASPAQSGNPEETDKLLKRIEVLG
FGTVNCGECGLSFSKMTNLLSHQRIHSGEKPYVCGVCEKGFSLKKSLARHQKAHSGEKPIVCRECGRGFN
RKSTLIIHERTHSGEKPYMCSECGRGFSQKSNLIIHQRTHSGEKPYVCRECGKGFSQKSAVVRHQRTHLE
EKTIVCSDCGLGFSDRSNLISHQRTHSGEKPYACKECGRCFRQRTTLVNHQRTHSKEKPYVCGVCGHSFS
QNSTLISHRRTHTGEKPYVCGVCGRGFSLKSHLNRHQNIHSGEKPIVCKDCGRGFSQQSNLIRHQRTHSG
EKPMVCGECGRGFSQKSNLVAHQRTHSGERPYVCRECGRGFSHQAGLIRHKRKHSREKPYMCRQCGLGFG
NKSALITHKRAHSEEKPCVCRECGQGFLQKSHLTLHQMTHTGEKPYVCKTCGRGFSLKSHLSRHRKTTSV
HHRLPVQPDPEPCAGQPSDSLYSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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