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Report for CCDS92700.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92700.1 Public Homo sapiens 19 ZNF544 24 110 108 CCDS HistoryNCBI Gene:27300Re-query CCDS DB by CCDS ID:92700.1Re-query CCDS DB by GeneID:27300See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92700.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000595981.5 ENSP00000470843.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000595981.5Link to Ensembl Protein Viewer:ENSP00000470843.1Re-query CCDS DB by Nucleotide ID:ENST00000595981Re-query CCDS DB by Protein ID:ENSP00000470843
Original member Current member NCBI NM_001387418.1 NP_001374347.1 Accepted alive Link to Nucleotide Sequence:NM_001387418.1Link to Protein Sequence:NP_001374347.1Re-query CCDS DB by Nucleotide ID:NM_001387418Re-query CCDS DB by Protein ID:NP_001374347Link to BLAST:NP_001374347.1
Original member Current member NCBI NM_001387419.1 NP_001374348.1 Accepted alive Link to Nucleotide Sequence:NM_001387419.1Link to Protein Sequence:NP_001374348.1Re-query CCDS DB by Nucleotide ID:NM_001387419Re-query CCDS DB by Protein ID:NP_001374348Link to BLAST:NP_001374348.1

Chromosomal Locations for CCDS 92700.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 58244024 58244056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 58246301 58246427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 58246711 58246794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 58276323 58276429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 58277183 58277251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (420 nt):
ATGGAAGCACGTTCTATGCTGGTTCCACCCCAGGCATCTGTGTGCTTCGAGGATGTGGCTATGGCATTCA
CACAGGAGGAGTGGGAACAGCTGGACCTGGCCCAGAGGACACTGTACCGAGAGGTGACACTGGAGACCTG
GGAGCATATTGTCTCCCTGGGGCTTTTCCTTTCCAAATCTGATGTGATCTCTCAGCTGGAGCAAGAAGAG
GACCTGTGCAGGGCAGAGCAGGAGGCCCCCCGAGAGAAGGGGATGCTGCCTGGGAGCTTTTTGGGACTCC
CAATAGAAGACAGATTTAGTCTCCTGGAAGGCTGCCTGATCCAGTTCCCACAGCAGCTGCCACTTGCTCA
GGAACGAGGCCCAGCAAAAAGCAGAGACGGTACAGGGCCAGAAGGATCTGAGAGAGTGTGGCCAGCTTGA

Translation (139 aa):
MEARSMLVPPQASVCFEDVAMAFTQEEWEQLDLAQRTLYREVTLETWEHIVSLGLFLSKSDVISQLEQEE
DLCRAEQEAPREKGMLPGSFLGLPIEDRFSLLEGCLIQFPQQLPLAQERGPAKSRDGTGPEGSERVWPA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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