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Report for CCDS46102.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46102.1 Public Homo sapiens 19 ZNF226 24 110 108 CCDS HistoryNCBI Gene:7769Re-query CCDS DB by CCDS ID:46102.1Re-query CCDS DB by GeneID:7769See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46102.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000337433.10 ENSP00000336719.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000337433.10Link to Ensembl Protein Viewer:ENSP00000336719.5Re-query CCDS DB by Nucleotide ID:ENST00000337433Re-query CCDS DB by Protein ID:ENSP00000336719
Original member Current member EBI ENST00000454662.6 ENSP00000393265.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000454662.6Link to Ensembl Protein Viewer:ENSP00000393265.1Re-query CCDS DB by Nucleotide ID:ENST00000454662Re-query CCDS DB by Protein ID:ENSP00000393265
Original member Current member EBI ENST00000590089.5 ENSP00000465121.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000590089.5Link to Ensembl Protein Viewer:ENSP00000465121.1Re-query CCDS DB by Nucleotide ID:ENST00000590089Re-query CCDS DB by Protein ID:ENSP00000465121
Original member Current member NCBI NM_001032372.2 NP_001027544.1 Accepted alive Link to Nucleotide Sequence:NM_001032372.2Link to Protein Sequence:NP_001027544.1Re-query CCDS DB by Nucleotide ID:NM_001032372Re-query CCDS DB by Protein ID:NP_001027544Link to BLAST:NP_001027544.1
Original member Current member NCBI NM_001032373.2 NP_001027545.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001032373.2Link to Protein Sequence:NP_001027545.1Re-query CCDS DB by Nucleotide ID:NM_001032373Re-query CCDS DB by Protein ID:NP_001027545Link to BLAST:NP_001027545.1
Original member Current member NCBI NM_001319088.2 NP_001306017.1 Accepted alive Link to Nucleotide Sequence:NM_001319088.2Link to Protein Sequence:NP_001306017.1Re-query CCDS DB by Nucleotide ID:NM_001319088Re-query CCDS DB by Protein ID:NP_001306017Link to BLAST:NP_001306017.1
Original member Current member NCBI NM_001319089.2 NP_001306018.1 Accepted alive Link to Nucleotide Sequence:NM_001319089.2Link to Protein Sequence:NP_001306018.1Re-query CCDS DB by Nucleotide ID:NM_001319089Re-query CCDS DB by Protein ID:NP_001306018Link to BLAST:NP_001306018.1
Original member Current member NCBI NM_001319090.2 NP_001306019.1 Accepted alive Link to Nucleotide Sequence:NM_001319090.2Link to Protein Sequence:NP_001306019.1Re-query CCDS DB by Nucleotide ID:NM_001319090Re-query CCDS DB by Protein ID:NP_001306019Link to BLAST:NP_001306019.1
Original member Current member NCBI NM_001388168.1 NP_001375097.1 Accepted alive Link to Nucleotide Sequence:NM_001388168.1Link to Protein Sequence:NP_001375097.1Re-query CCDS DB by Nucleotide ID:NM_001388168Re-query CCDS DB by Protein ID:NP_001375097Link to BLAST:NP_001375097.1
Original member Current member NCBI NM_001388169.1 NP_001375098.1 Accepted alive Link to Nucleotide Sequence:NM_001388169.1Link to Protein Sequence:NP_001375098.1Re-query CCDS DB by Nucleotide ID:NM_001388169Re-query CCDS DB by Protein ID:NP_001375098Link to BLAST:NP_001375098.1
Original member Current member NCBI NM_001388170.1 NP_001375099.1 Accepted alive Link to Nucleotide Sequence:NM_001388170.1Link to Protein Sequence:NP_001375099.1Re-query CCDS DB by Nucleotide ID:NM_001388170Re-query CCDS DB by Protein ID:NP_001375099Link to BLAST:NP_001375099.1
Original member Current member NCBI NM_001388171.1 NP_001375100.1 Accepted alive Link to Nucleotide Sequence:NM_001388171.1Link to Protein Sequence:NP_001375100.1Re-query CCDS DB by Nucleotide ID:NM_001388171Re-query CCDS DB by Protein ID:NP_001375100Link to BLAST:NP_001375100.1
Original member Current member NCBI NM_001388172.1 NP_001375101.1 Accepted alive Link to Nucleotide Sequence:NM_001388172.1Link to Protein Sequence:NP_001375101.1Re-query CCDS DB by Nucleotide ID:NM_001388172Re-query CCDS DB by Protein ID:NP_001375101Link to BLAST:NP_001375101.1
Original member Current member NCBI NM_016444.3 NP_057528.2 Accepted alive Link to Nucleotide Sequence:NM_016444.3Link to Protein Sequence:NP_057528.2Re-query CCDS DB by Nucleotide ID:NM_016444Re-query CCDS DB by Protein ID:NP_057528Link to BLAST:NP_057528.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001027544.1 803 Q9NYT6-1 803 100% 0 0
NP_001027545.1 803 Q9NYT6-1 803 100% 0 0
NP_001306017.1 803 Q9NYT6-1 803 100% 0 0
NP_001306018.1 803 Q9NYT6-1 803 100% 0 0
NP_001306019.1 803 Q9NYT6-1 803 100% 0 0
NP_001375097.1 803 Q9NYT6-1 803 100% 0 0
NP_001375098.1 803 Q9NYT6-1 803 100% 0 0
NP_001375099.1 803 Q9NYT6-1 803 100% 0 0
NP_001375100.1 803 Q9NYT6-1 803 100% 0 0
NP_001375101.1 803 Q9NYT6-1 803 100% 0 0
NP_057528.2 803 Q9NYT6-1 803 100% 0 0

Chromosomal Locations for CCDS 46102.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 44170081 44170095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44172088 44172214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44172860 44172952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44175498 44177674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2412 nt):
ATGAATATGTTCAAGGAAGCAGTGACCTTCAAGGACGTGGCTGTGGCCTTCACGGAGGAGGAATTGGGGC
TG
CTGGGCCCTGCCCAGAGGAAGCTGTACCGAGATGTGATGGTGGAGAACTTTAGGAACCTGCTGTCAGT
G
GGGCATCCACCCTTCAAACAAGATGTATCACCTATAGAAAGAAATGAGCAGCTTTGGATAATGACGACA
GCA
ACCCGAAGACAGGGAAATTTAGGAGAGAAAAATCAAAGTAAGTTAATTACTGTTCAAGACAGAGAAT
CA
GAAGAAGAGCTTTCTTGTTGGCAAATCTGGCAACAAATTGCAAATGACTTAACCAGGTGTCAAGACTC
C
ATGATCAATAATTCTCAGTGTCACAAACAAGGTGATTTCCCTTACCAGGTAGGGACAGAACTGTCTATT
CAA
ATTTCTGAAGATGAGAACTATATAGTAAATAAAGCAGATGGTCCCAATAATACTGGGAATCCAGAGT
TT
CCTATCTTGAGAACCCAGGATTCTTGGAGGAAAACATTCCTGACTGAGTCACAGAGATTGAACAGAGA
T
CAGCAAATTTCCATAAAAAATAAATTATGTCAATGTAAGAAGGGTGTTGATCCCATCGGTTGGATTTCA
CAT
CATGATGGTCATAGAGTACACAAAAGTGAAAAATCTTATAGACCCAATGATTATGAAAAAGACAACA
TG
AAGATTTTGACATTTGATCACAATAGCATGATTCACACAGGACAGAAATCGTACCAGTGTAATGAGTG
T
AAAAAACCCTTCAGTGATCTCTCCAGCTTTGATCTTCATCAGCAGTTACAATCAGGAGAGAAGTCTCTT
ACA
TGTGTTGAGCGTGGAAAAGGCTTCTGTTACAGCCCAGTTCTTCCTGTTCATCAGAAAGTACATGTGG
GA
GAAAAACTTAAGTGTGATGAGTGTGGTAAGGAATTCAGTCAGGGCGCTCATCTACAGACCCATCAGAA
A
GTCCACGTGATAGAGAAACCATACAAATGTAAGCAATGTGGGAAAGGTTTCAGTCGTAGATCAGCACTT
AAT
GTTCATTGCAAGGTCCACACGGCAGAGAAACCTTATAATTGTGAGGAGTGTGGGAGGGCCTTCAGTC
AG
GCCTCTCATCTTCAGGACCATCAGAGACTCCACACTGGGGAGAAGCCATTCAAATGTGATGCATGTGG
T
AAGAGCTTCAGTCGGAATTCACATCTTCAATCCCATCAAAGAGTTCATACAGGAGAGAAACCATACAAA
TGT
GAGGAGTGTGGTAAGGGCTTCATTTGTAGCTCAAATCTTTACATTCATCAGAGAGTCCACACAGGAG
AA
AAACCCTATAAATGTGAGGAATGTGGTAAAGGCTTTAGTCGGCCTTCAAGTCTTCAGGCCCATCAGGG
A
GTTCACACTGGAGAGAAGTCATACATATGTACTGTATGTGGGAAAGGCTTTACTCTGAGTTCAAATCTT
CAA
GCCCATCAGAGAGTCCACACTGGAGAGAAGCCATACAAATGCAATGAGTGTGGGAAGAGCTTCAGGA
GG
AATTCCCATTATCAAGTTCATCTAGTGGTCCACACAGGAGAGAAACCCTATAAATGTGAGATATGTGG
G
AAGGGCTTCAGTCAAAGTTCGTATCTTCAAATCCATCAGAAGGCCCACAGTATAGAGAAACCTTTTAAG
TGT
GAGGAGTGTGGGCAGGGTTTCAATCAGAGCTCACGACTTCAGATTCACCAGCTGATCCATACGGGTG
AG
AAACCATACAAATGTGAAGAGTGTGGCAAGGGATTTAGTCGTAGAGCAGATCTTAAAATTCACTGTAG
G
ATCCACACAGGAGAGAAACCATATAATTGTGAGGAGTGTGGGAAGGTCTTCAGGCAGGCCTCAAATCTT
TTG
GCCCATCAGAGAGTCCACAGTGGAGAAAAACCATTCAAATGTGAAGAATGTGGGAAGAGTTTCGGTC
GG
AGTGCACATCTTCAAGCCCATCAAAAAGTCCACACTGGAGATAAGCCATACAAATGTGATGAGTGTGG
G
AAGGGCTTCAAGTGGAGCTTGAACCTTGACATGCATCAGAGGGTGCACACAGGAGAAAAACCATATAAA
TGT
GGGGAGTGTGGTAAGTACTTCAGTCAGGCCTCAAGTCTTCAACTTCATCAGAGTGTCCACACAGGAG
AG
AAACCATACAAATGTGATGTGTGTGGTAAAGTCTTCAGTCGGTCTTCACAACTACAGTCTCATCAGCG
A
GTTCACACTGGGGAGAAACCTTATAAATGTGAGATATGTGGTAAGAGCTTCAGTTGGCGATCAAATCTT
ACA
GTTCATCACAGAATCCATGTTGGTGATAAATCCTATAAAAGTAATAGGGGTGGTAAGAACATCAGAG
AA
TCCACACAGGAAAAAAAATCTATAAAATGA


Translation (803 aa):
MNMFKEAVTFKDVAVAFTEEELGLLGPAQRKLYRDVMVENFRNLLSVGHPPFKQDVSPIERNEQLWIMTT
A
TRRQGNL
GEKNQSKLITVQDRESEEELSCWQIWQQIANDLTRCQDSMINNSQCHKQGDFPYQVGTELSI
Q
ISEDENYIVNKADGPNNTGNPEFPILRTQDSWRKTFLTESQRLNRDQQISIKNKLCQCKKGVDPIGWIS
H
HDGHRVHKSEKSYRPNDYEKDNMKILTFDHNSMIHTGQKSYQCNECKKPFSDLSSFDLHQQLQSGEKSL
T
CVERGKGFCYSPVLPVHQKVHVGEKLKCDECGKEFSQGAHLQTHQKVHVIEKPYKCKQCGKGFSRRSAL
N
VHCKVHTAEKPYNCEECGRAFSQASHLQDHQRLHTGEKPFKCDACGKSFSRNSHLQSHQRVHTGEKPYK
C
EECGKGFICSSNLYIHQRVHTGEKPYKCEECGKGFSRPSSLQAHQGVHTGEKSYICTVCGKGFTLSSNL
Q
AHQRVHTGEKPYKCNECGKSFRRNSHYQVHLVVHTGEKPYKCEICGKGFSQSSYLQIHQKAHSIEKPFK
C
EECGQGFNQSSRLQIHQLIHTGEKPYKCEECGKGFSRRADLKIHCRIHTGEKPYNCEECGKVFRQASNL
L
AHQRVHSGEKPFKCEECGKSFGRSAHLQAHQKVHTGDKPYKCDECGKGFKWSLNLDMHQRVHTGEKPYK
C
GECGKYFSQASSLQLHQSVHTGEKPYKCDVCGKVFSRSSQLQSHQRVHTGEKPYKCEICGKSFSWRSNL
T
VHHRIHVGDKSYKSNRGGKNIRESTQEKKSIK




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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