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Report for CCDS43677.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43677.1 Public Homo sapiens 7 REPIN1 24 110 108 CCDS HistoryNCBI Gene:29803Re-query CCDS DB by CCDS ID:43677.1Re-query CCDS DB by GeneID:29803See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43677.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397281.6 ENSP00000380451.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397281.6Link to Ensembl Protein Viewer:ENSP00000380451.2Re-query CCDS DB by Nucleotide ID:ENST00000397281Re-query CCDS DB by Protein ID:ENSP00000380451
Original member Current member EBI ENST00000425389.2 ENSP00000388287.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000425389.2Link to Ensembl Protein Viewer:ENSP00000388287.2Re-query CCDS DB by Nucleotide ID:ENST00000425389Re-query CCDS DB by Protein ID:ENSP00000388287
Original member Current member EBI ENST00000444957.3 ENSP00000407714.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000444957.3Link to Ensembl Protein Viewer:ENSP00000407714.1Re-query CCDS DB by Nucleotide ID:ENST00000444957Re-query CCDS DB by Protein ID:ENSP00000407714
Original member Current member NCBI NM_001099696.3 NP_001093166.1 Accepted alive Link to Nucleotide Sequence:NM_001099696.3Link to Protein Sequence:NP_001093166.1Re-query CCDS DB by Nucleotide ID:NM_001099696Re-query CCDS DB by Protein ID:NP_001093166Link to BLAST:NP_001093166.1
Original member Current member NCBI NM_001362746.2 NP_001349675.1 Accepted alive Link to Nucleotide Sequence:NM_001362746.2Link to Protein Sequence:NP_001349675.1Re-query CCDS DB by Nucleotide ID:NM_001362746Re-query CCDS DB by Protein ID:NP_001349675Link to BLAST:NP_001349675.1
Original member Current member NCBI NM_001362747.2 NP_001349676.1 Accepted alive Link to Nucleotide Sequence:NM_001362747.2Link to Protein Sequence:NP_001349676.1Re-query CCDS DB by Nucleotide ID:NM_001362747Re-query CCDS DB by Protein ID:NP_001349676Link to BLAST:NP_001349676.1
Original member Current member NCBI NM_001388046.1 NP_001374975.1 Accepted alive Link to Nucleotide Sequence:NM_001388046.1Link to Protein Sequence:NP_001374975.1Re-query CCDS DB by Nucleotide ID:NM_001388046Re-query CCDS DB by Protein ID:NP_001374975Link to BLAST:NP_001374975.1
Original member Current member NCBI NM_001388047.1 NP_001374976.1 Accepted alive Link to Nucleotide Sequence:NM_001388047.1Link to Protein Sequence:NP_001374976.1Re-query CCDS DB by Nucleotide ID:NM_001388047Re-query CCDS DB by Protein ID:NP_001374976Link to BLAST:NP_001374976.1
Original member Current member NCBI NM_001388048.1 NP_001374977.1 Accepted alive Link to Nucleotide Sequence:NM_001388048.1Link to Protein Sequence:NP_001374977.1Re-query CCDS DB by Nucleotide ID:NM_001388048Re-query CCDS DB by Protein ID:NP_001374977Link to BLAST:NP_001374977.1
Original member Current member NCBI NM_001388049.1 NP_001374978.1 Accepted alive Link to Nucleotide Sequence:NM_001388049.1Link to Protein Sequence:NP_001374978.1Re-query CCDS DB by Nucleotide ID:NM_001388049Re-query CCDS DB by Protein ID:NP_001374978Link to BLAST:NP_001374978.1
Original member Current member NCBI NM_001388050.1 NP_001374979.1 Accepted alive Link to Nucleotide Sequence:NM_001388050.1Link to Protein Sequence:NP_001374979.1Re-query CCDS DB by Nucleotide ID:NM_001388050Re-query CCDS DB by Protein ID:NP_001374979Link to BLAST:NP_001374979.1
Original member Current member NCBI NM_001388051.1 NP_001374980.1 Accepted alive Link to Nucleotide Sequence:NM_001388051.1Link to Protein Sequence:NP_001374980.1Re-query CCDS DB by Nucleotide ID:NM_001388051Re-query CCDS DB by Protein ID:NP_001374980Link to BLAST:NP_001374980.1
Original member Current member NCBI NM_001388052.1 NP_001374981.1 Accepted alive Link to Nucleotide Sequence:NM_001388052.1Link to Protein Sequence:NP_001374981.1Re-query CCDS DB by Nucleotide ID:NM_001388052Re-query CCDS DB by Protein ID:NP_001374981Link to BLAST:NP_001374981.1
Original member Current member NCBI NM_001388053.1 NP_001374982.1 Accepted alive Link to Nucleotide Sequence:NM_001388053.1Link to Protein Sequence:NP_001374982.1Re-query CCDS DB by Nucleotide ID:NM_001388053Re-query CCDS DB by Protein ID:NP_001374982Link to BLAST:NP_001374982.1
Original member Current member NCBI NM_001388054.1 NP_001374983.1 Accepted alive Link to Nucleotide Sequence:NM_001388054.1Link to Protein Sequence:NP_001374983.1Re-query CCDS DB by Nucleotide ID:NM_001388054Re-query CCDS DB by Protein ID:NP_001374983Link to BLAST:NP_001374983.1
Original member Current member NCBI NM_001388055.1 NP_001374984.1 Accepted alive Link to Nucleotide Sequence:NM_001388055.1Link to Protein Sequence:NP_001374984.1Re-query CCDS DB by Nucleotide ID:NM_001388055Re-query CCDS DB by Protein ID:NP_001374984Link to BLAST:NP_001374984.1
Original member Current member NCBI NM_001388056.1 NP_001374985.1 Accepted alive Link to Nucleotide Sequence:NM_001388056.1Link to Protein Sequence:NP_001374985.1Re-query CCDS DB by Nucleotide ID:NM_001388056Re-query CCDS DB by Protein ID:NP_001374985Link to BLAST:NP_001374985.1
Original member Current member NCBI NM_001388057.1 NP_001374986.1 Accepted alive Link to Nucleotide Sequence:NM_001388057.1Link to Protein Sequence:NP_001374986.1Re-query CCDS DB by Nucleotide ID:NM_001388057Re-query CCDS DB by Protein ID:NP_001374986Link to BLAST:NP_001374986.1
Original member Current member NCBI NM_001388058.1 NP_001374987.1 Accepted alive Link to Nucleotide Sequence:NM_001388058.1Link to Protein Sequence:NP_001374987.1Re-query CCDS DB by Nucleotide ID:NM_001388058Re-query CCDS DB by Protein ID:NP_001374987Link to BLAST:NP_001374987.1
Original member Current member NCBI NM_001388059.1 NP_001374988.1 Accepted alive Link to Nucleotide Sequence:NM_001388059.1Link to Protein Sequence:NP_001374988.1Re-query CCDS DB by Nucleotide ID:NM_001388059Re-query CCDS DB by Protein ID:NP_001374988Link to BLAST:NP_001374988.1
Original member Current member NCBI NM_001388060.1 NP_001374989.1 Accepted alive Link to Nucleotide Sequence:NM_001388060.1Link to Protein Sequence:NP_001374989.1Re-query CCDS DB by Nucleotide ID:NM_001388060Re-query CCDS DB by Protein ID:NP_001374989Link to BLAST:NP_001374989.1
Original member Current member NCBI NM_001388061.1 NP_001374990.1 Accepted alive Link to Nucleotide Sequence:NM_001388061.1Link to Protein Sequence:NP_001374990.1Re-query CCDS DB by Nucleotide ID:NM_001388061Re-query CCDS DB by Protein ID:NP_001374990Link to BLAST:NP_001374990.1
Original member Current member NCBI NM_001388062.1 NP_001374991.1 Accepted alive Link to Nucleotide Sequence:NM_001388062.1Link to Protein Sequence:NP_001374991.1Re-query CCDS DB by Nucleotide ID:NM_001388062Re-query CCDS DB by Protein ID:NP_001374991Link to BLAST:NP_001374991.1
Original member Current member NCBI NM_001388063.1 NP_001374992.1 Accepted alive Link to Nucleotide Sequence:NM_001388063.1Link to Protein Sequence:NP_001374992.1Re-query CCDS DB by Nucleotide ID:NM_001388063Re-query CCDS DB by Protein ID:NP_001374992Link to BLAST:NP_001374992.1
Original member Current member NCBI NM_001388064.1 NP_001374993.1 Accepted alive Link to Nucleotide Sequence:NM_001388064.1Link to Protein Sequence:NP_001374993.1Re-query CCDS DB by Nucleotide ID:NM_001388064Re-query CCDS DB by Protein ID:NP_001374993Link to BLAST:NP_001374993.1
Original member Current member NCBI NM_001388065.1 NP_001374994.1 Accepted alive Link to Nucleotide Sequence:NM_001388065.1Link to Protein Sequence:NP_001374994.1Re-query CCDS DB by Nucleotide ID:NM_001388065Re-query CCDS DB by Protein ID:NP_001374994Link to BLAST:NP_001374994.1
Original member Current member NCBI NM_013400.4 NP_037532.2 Accepted alive Link to Nucleotide Sequence:NM_013400.4Link to Protein Sequence:NP_037532.2Re-query CCDS DB by Nucleotide ID:NM_013400Re-query CCDS DB by Protein ID:NP_037532Link to BLAST:NP_037532.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001093166.1 567 Q9BWE0-3 567 100% 0 0
NP_001349675.1 567 Q9BWE0-3 567 100% 0 0
NP_001349676.1 567 Q9BWE0-3 567 100% 0 0
NP_001374975.1 567 Q9BWE0-3 567 100% 0 0
NP_001374976.1 567 Q9BWE0-3 567 100% 0 0
NP_001374977.1 567 Q9BWE0-3 567 100% 0 0
NP_001374978.1 567 Q9BWE0-3 567 100% 0 0
NP_001374979.1 567 Q9BWE0-3 567 100% 0 0
NP_001374980.1 567 Q9BWE0-3 567 100% 0 0
NP_001374981.1 567 Q9BWE0-3 567 100% 0 0
NP_001374982.1 567 Q9BWE0-3 567 100% 0 0
NP_001374983.1 567 Q9BWE0-3 567 100% 0 0
NP_001374984.1 567 Q9BWE0-3 567 100% 0 0
NP_001374985.1 567 Q9BWE0-3 567 100% 0 0
NP_001374986.1 567 Q9BWE0-3 567 100% 0 0
NP_001374987.1 567 Q9BWE0-3 567 100% 0 0
NP_001374988.1 567 Q9BWE0-3 567 100% 0 0
NP_001374989.1 567 Q9BWE0-3 567 100% 0 0
NP_001374990.1 567 Q9BWE0-3 567 100% 0 0
NP_001374991.1 567 Q9BWE0-3 567 100% 0 0
NP_001374992.1 567 Q9BWE0-3 567 100% 0 0
NP_001374993.1 567 Q9BWE0-3 567 100% 0 0
NP_001374994.1 567 Q9BWE0-3 567 100% 0 0
NP_037532.2 567 Q9BWE0-3 567 100% 0 0

Chromosomal Locations for CCDS 43677.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 150371242 150372945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1704 nt):
ATGCTGGAACGTCGTTGCAGGGGCCCCCTGGCCATGGGCCTGGCCCAGCCCCGACTCCTTTCTGGGCCCT
CCCAGGAGTCACCCCAGACCCTGGGGAAGGAGTCCCGCGGGCTGAGGCAACAAGGCACGTCAGTGGCCCA
GTCTGGTGCCCAAGCCCCAGGCAGGGCCCATCGCTGTGCCCACTGTCGAAGGCACTTCCCTGGCTGGGTG
GCTCTGTGGCTTCACACCCGCCGGTGCCAGGCCCGGCTGCCCTTGCCCTGCCCTGAGTGTGGCCGTCGCT
TTCGCCATGCCCCCTTCTTAGCACTGCACCGCCAGGTCCATGCTGCTGCCACCCCAGACCTGGGCTTTGC
CTGCCACCTCTGTGGGCAGAGCTTCCGAGGCTGGGTGGCCCTGGTTCTGCATCTGCGGGCCCATTCAGCT
GCAAAGCGGCCCATCGCTTGTCCCAAATGCGAGAGACGCTTCTGGCGACGAAAGCAGCTTCGAGCTCATC
TGCGGCGGTGCCACCCTCCCGCCCCGGAGGCCCGGCCCTTCATATGCGGCAACTGTGGCCGGAGCTTTGC
CCAGTGGGACCAGCTAGTTGCCCACAAGCGGGTGCACGTAGCTGAGGCCCTGGAGGAGGCCGCAGCCAAG
GCTCTGGGGCCCCGGCCCAGGGGCCGCCCCGCGGTGACCGCCCCCCGGCCCGGTGGAGATGCCGTCGACC
GCCCCTTCCAGTGTGCCTGTTGTGGCAAGCGCTTCCGGCACAAGCCCAACTTGATCGCTCACCGCCGCGT
GCACACGGGCGAGCGGCCCCACCAGTGCCCCGAGTGCGGGAAGCGCTTTACCAATAAGCCCTATCTGACT
TCGCACCGGCGCATCCACACCGGCGAGAAGCCCTACCCGTGCAAAGAGTGCGGCCGCCGCTTCCGGCACA
AACCCAACCTGCTGTCTCACAGCAAGATTCACAAGCGATCCGAGGGGTCGGCCCAGGCCGCCCCCGGCCC
GGGGAGCCCCCAGCTGCCAGCCGGCCCCCAGGAGTCCGCGGCCGAGCCCACCCCGGCGGTACCTCTGAAA
CCGGCCCAGGAGCCGCCGCCAGGGGCCCCGCCAGAGCACCCGCAGGACCCGATCGAAGCCCCCCCCTCCC
TCTACAGCTGCGACGACTGCGGCAGGAGCTTCCGGCTGGAGCGCTTCCTGCGGGCCCACCAGCGGCAGCA
CACCGGGGAGCGGCCCTTCACCTGCGCCGAGTGCGGGAAGAACTTCGGCAAGAAGACGCACCTGGTGGCG
CACTCGCGCGTGCACTCCGGCGAGCGGCCCTTCGCCTGCGAGGAGTGCGGCCGCCGCTTCTCCCAGGGCA
GCCATCTGGCGGCGCATCGGCGCGACCACGCCCCCGATCGGCCCTTCGTGTGTCCCGACTGCGGCAAGGC
CTTCCGCCACAAACCCTACCTGGCGGCGCACCGGCGCATCCACACCGGCGAGAAGCCCTACGTCTGCCCC
GACTGCGGCAAAGCCTTCAGCCAGAAGTCCAACCTGGTGTCGCACCGGCGCATCCACACGGGCGAGCGGC
CCTACGCCTGTCCCGACTGCGACCGCAGCTTCAGCCAGAAGTCCAACCTCATCACCCACCGCAAGAGCCA
CATCCGGGACGGCGCCTTCTGCTGTGCCATCTGTGGCCAGACCTTCGACGACGAGGAGAGACTCCTGGCC
CACCAGAAGAAGCACGATGTCTGA

Translation (567 aa):
MLERRCRGPLAMGLAQPRLLSGPSQESPQTLGKESRGLRQQGTSVAQSGAQAPGRAHRCAHCRRHFPGWV
ALWLHTRRCQARLPLPCPECGRRFRHAPFLALHRQVHAAATPDLGFACHLCGQSFRGWVALVLHLRAHSA
AKRPIACPKCERRFWRRKQLRAHLRRCHPPAPEARPFICGNCGRSFAQWDQLVAHKRVHVAEALEEAAAK
ALGPRPRGRPAVTAPRPGGDAVDRPFQCACCGKRFRHKPNLIAHRRVHTGERPHQCPECGKRFTNKPYLT
SHRRIHTGEKPYPCKECGRRFRHKPNLLSHSKIHKRSEGSAQAAPGPGSPQLPAGPQESAAEPTPAVPLK
PAQEPPPGAPPEHPQDPIEAPPSLYSCDDCGRSFRLERFLRAHQRQHTGERPFTCAECGKNFGKKTHLVA
HSRVHSGERPFACEECGRRFSQGSHLAAHRRDHAPDRPFVCPDCGKAFRHKPYLAAHRRIHTGEKPYVCP
DCGKAFSQKSNLVSHRRIHTGERPYACPDCDRSFSQKSNLITHRKSHIRDGAFCCAICGQTFDDEERLLA
HQKKHDV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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