NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS1736.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1736.1 Public Homo sapiens 2 ABHD1 24 110 108 CCDS HistoryNCBI Gene:84696Re-query CCDS DB by CCDS ID:1736.1Re-query CCDS DB by GeneID:84696See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1736.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000316470.9 ENSP00000326491.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000316470.9Link to Ensembl Protein Viewer:ENSP00000326491.4Re-query CCDS DB by Nucleotide ID:ENST00000316470Re-query CCDS DB by Protein ID:ENSP00000326491
Original member Current member NCBI NM_032604.4 NP_115993.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032604.4Link to Protein Sequence:NP_115993.3Re-query CCDS DB by Nucleotide ID:NM_032604Re-query CCDS DB by Protein ID:NP_115993Link to BLAST:NP_115993.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115993.3 405 Q96SE0-1 405 100% 0 0

Chromosomal Locations for CCDS 1736.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 27123949 27124062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27128441 27128601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27128945 27129127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27129316 27129361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27129514 27129626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27129754 27129927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27130105 27130153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27130251 27130416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27130533 27130744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1218 nt):
ATGCTGAGCTCCTTCCTGAGCCCCCAGAATGGCACCTGGGCAGACACCTTCTCTCTGCTCTTGGCTCTTG
CC
GTTGCCCTCTACTTGGGCTACTACTGGGCATGTGTGCTTCAGAGGCCTCGGCTGGTGGCTGGGCCGCA
G
TTTCTGGCCTTCCTGGAGCCACACTGTTCCATCACCACCGAGACTTTCTACCCAACGCTGTGGTGTTTT
GAG
GGGCGACTACAAAGCATCTTCCAAGTCCTCCTGCAGTCTCAGCCCCTAGTCCTTTATCAGAGTGACA
TC
CTCCAAACACCAGATGGAGGCCAGCTCCTGCTAGACTGGGCCAAGCAGCCTGACAGCAGCCAAGACCC
T
GATCCTACTACCCAGCCCATTGTGCTGCTGCTTCCTGGCATCACTGGCAGTAGCCAGGAGACATACGTC
TTG
CACCTAGTTAACCAAGCTCTGAGGGATGGCTACCAGGCTGTCGTGTTTAACAACCGGGGCTGCCGTG
GG
GAGGAACTGCGGACCCACAGGGCTTTTTGTGCCAGCAATACTGAAGATCTAGAGACAGTCGTGAACCA
C
ATAAAGCATCGTTATCCCCAAGCTCCACTGCTGGCCGTGGGCATCTCTTTTGGAGGGATACTGGTGCTG
AAT
CACCTGGCACAGGCCAGGCAGGCTGCAGGGCTGGTGGCAGCACTGACTCTGTCTGCATGCTGGGATT
CC
TTTGAGACCACTCGCTCCCTGGAAACCCCACTCAACTCACTGCTCTTCAATCAGCCCCTCACTGCTGG
G
CTCTGCCAACTTGTGGAACGAAACAGAAAGGTGATTGAAAAGGTGGTGGACATAGACTTTGTACTACAG
GCC
CGTACAATCCGCCAGTTTGATGAGCGCTACACATCTGTGGCCTTTGGATATCAAGACTGTGTTACCT
AC
TACAAAGCAGCAAGCCCTAGAACCAAGATAGATGCCATCCGGATCCCTGTGCTCTATCTCAGTGCAGC
A
GATGACCCCTTCTCCCCCGTCTGTGCCCTTCCCATACAGGCCGCCCAACACTCCCCCTACGTTGCGCTG
CTC
ATCACAGCCCGGGGTGGCCACATCGGCTTCCTGGAAGGGCTGCTCCCGTGGCAGCACTGGTACATGA
GC
CGCCTCTTGCATCAGTACGCCAAAGCCATCTTCCAGGACCCAGAGGGGCTGCCTGACCTCAGGGCTCT
C
TTACCTTCTGAGGACAGAAACAGCTGA


Translation (405 aa):
MLSSFLSPQNGTWADTFSLLLALAVALYLGYYWACVLQRPRLVAGPQFLAFLEPHCSITTETFYPTLWCF
E
GRLQSIFQVLLQSQPLVLYQ
SDILQTPDGGQLLLDWAKQPDSSQDPDPTTQPIVLLLPGITGSSQETYV
L
HLVNQALRDGY
QAVVFNNRGCRGEELRTHRAFCASNTEDLETVVNHIKHRYPQAPLLAVGISFGGILVL
N
HLAQARQAAGLVAALTLSACWDSFETTRSLETPLNSLLFNQPLTAGLCQLVE
RNRKVIEKVVDIDFVLQ
A
RTIRQFDERYTSVAFGYQDCVTYYKAASPRTKIDAIRIPVLYLSAADDPFSPVC
ALPIQAAQHSPYVAL
L
ITARGGHIGFLEGLLPWQHWYMSRLLHQYAKAIFQDPEGLPDLRALLPSEDRNS




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser