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Report for CCDS44927.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44927.1 Public Homo sapiens 12 NEMP1 24 110 108 CCDS HistoryNCBI Gene:23306Re-query CCDS DB by CCDS ID:44927.1Re-query CCDS DB by GeneID:23306See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44927.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000300128.9 ENSP00000300128.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000300128.9Link to Ensembl Protein Viewer:ENSP00000300128.4Re-query CCDS DB by Nucleotide ID:ENST00000300128Re-query CCDS DB by Protein ID:ENSP00000300128
Original member Current member NCBI NM_001130963.2 NP_001124435.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001130963.2Link to Protein Sequence:NP_001124435.1Re-query CCDS DB by Nucleotide ID:NM_001130963Re-query CCDS DB by Protein ID:NP_001124435Link to BLAST:NP_001124435.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001124435.1 444 O14524-1 444 100% 0 0

Chromosomal Locations for CCDS 44927.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 57059879 57060059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57060772 57060945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57063119 57063344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57064071 57064185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57064646 57064739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57069234 57069306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57070674 57070893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57072788 57072912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57078619 57078745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1335 nt):
ATGGCGGGAGGAATGAAAGTGGCGGTCTCGCCGGCAGTTGGTCCCGGGCCCTGGGGCTCGGGAGTCGGGG
GCGGTGGGACAGTGCGGCTACTCTTGATCCTCTCCGGCTGCTTGGTCTACGGCACAGCTGAAACTGATGT
AAATGTGGTCATGCTTCAGGAATCCCAAGTTTGTGAAAAGCGTGCCAGCCAACAATTCTGTTACACAAAT
GTGCTTATCCCAAAATGGCATGATATATGGACACGGATACAGATCCGAGTAAATAGTTCCAGATTGGTTC
GAGTCACCCAGGTGGAGAATGAGGAGAAACTGAAGGAGCTAGAGCAGTTTAGTATCTGGAACTTTTTTTC
CTCCTTTTTAAAAGAGAAATTGAATGACACCTATGTTAACGTGGGTCTATACAGCACAAAAACCTGCCTC
AAAGTTGAGATTATAGAGAAGGACACCAAGTACAGTGTCATTGTGATCCGGAGATTTGATCCCAAACTCT
TTCTTGTTTTCCTTCTTGGACTTATGCTATTTTTTTGTGGAGACTTGCTGAGCAGAAGTCAAATTTTCTA
CTACTCTACTGGGATGACTGTGGGAATTGTGGCCTCTCTGCTAATCATCATTTTTATACTATCTAAGTTT
ATGCCTAAGAAAAGTCCCATTTACGTCATCCTGGTGGGAGGCTGGTCTTTTTCTCTGTACCTCATTCAAC
TAGTTTTTAAAAATTTACAAGAGATCTGGAGGTGTTACTGGCAGTATCTTTTAAGTTATGTCCTCACAGT
TGGATTCATGAGTTTTGCAGTATGTTACAAGTATGGGCCCTTGGAGAATGAACGAAGTATCAACCTGCTG
ACCTGGACCTTGCAGCTGATGGGCCTGTGTTTCATGTATTCTGGCATCCAGATACCACATATTGCCCTTG
CCATTATCATCATTGCTCTTTGTACTAAGAACCTGGAACACCCTATTCAGTGGCTGTACATCACCTGCAG
AAAGGTGTGTAAGGGAGCAGAAAAGCCTGTTCCCCCTCGTCTCCTGACAGAAGAAGAATATCGGATACAA
GGAGAGGTAGAAACCCGAAAGGCTTTAGAGGAGCTCCGAGAATTTTGTAACAGTCCAGACTGCTCTGCTT
GGAAGACTGTTTCTCGAATCCAGTCTCCAAAAAGATTTGCTGACTTTGTGGAAGGCTCTTCCCACCTCAC
GCCAAATGAAGTTTCTGTCCATGAGCAGGAGTATGGATTAGGGAGCATTATTGCCCAGGATGAAATCTAT
GAGGAAGCATCCTCTGAGGAGGAGGACTCATATTCTCGGTGTCCTGCTATCACACAGAACAACTTTCTAA
CCTAG

Translation (444 aa):
MAGGMKVAVSPAVGPGPWGSGVGGGGTVRLLLILSGCLVYGTAETDVNVVMLQESQVCEKRASQQFCYTN
VLIPKWHDIWTRIQIRVNSSRLVRVTQVENEEKLKELEQFSIWNFFSSFLKEKLNDTYVNVGLYSTKTCL
KVEIIEKDTKYSVIVIRRFDPKLFLVFLLGLMLFFCGDLLSRSQIFYYSTGMTVGIVASLLIIIFILSKF
MPKKSPIYVILVGGWSFSLYLIQLVFKNLQEIWRCYWQYLLSYVLTVGFMSFAVCYKYGPLENERSINLL
TWTLQLMGLCFMYSGIQIPHIALAIIIIALCTKNLEHPIQWLYITCRKVCKGAEKPVPPRLLTEEEYRIQ
GEVETRKALEELREFCNSPDCSAWKTVSRIQSPKRFADFVEGSSHLTPNEVSVHEQEYGLGSIIAQDEIY
EEASSEEEDSYSRCPAITQNNFLT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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