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Report for CCDS60524.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
60524.1 Public Homo sapiens 10 ANTXRL 24 110 108 CCDS HistoryNCBI Gene:195977Re-query CCDS DB by CCDS ID:60524.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 60524.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000620264.5 ENSP00000480615.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000620264.5Link to Ensembl Protein Viewer:ENSP00000480615.1Re-query CCDS DB by Nucleotide ID:ENST00000620264Re-query CCDS DB by Protein ID:ENSP00000480615
Original member Current member NCBI NM_001278688.3 NP_001265617.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001278688.3Link to Protein Sequence:NP_001265617.1Re-query CCDS DB by Nucleotide ID:NM_001278688Re-query CCDS DB by Protein ID:NP_001265617Link to BLAST:NP_001265617.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265617.1 631 A6NF34 631 100% 0 0

Chromosomal Locations for CCDS 60524.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 46287263 46287510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 46292058 46292129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 46293829 46293900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 46296019 46296100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 46296219 46296252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 46297252 46297328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 46297406 46297474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 46297831 46297911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 46298002 46298062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 46302722 46302820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 46306803 46306872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 46307402 46307480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 46309113 46309202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 46310461 46310499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 46311510 46311665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 46313236 46313316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 46329599 46330084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1896 nt):
ATGGGGAGCCATGAGTCCCTGGGGCCCTACTTCCTGGTCTTCCTGCTGCTGCTGCTGCTTCCTCCACCGC
TTTTTAGAGCAGGAAGCCTTCGGTACCATGGACCTGACTGGAGAATATTTCACCGCCTGGCCCTGGGCTC
CAGGAGAGCCCACCACCACCATGGCCCAGGATGGAGGCAGCACTGGCGCCAGGGGCAAGCAGGTCACAGA
TGCCAGGGCTCATTTGACCTCTACTTCATCTTGGACAAGTCTGGCAGCGTGAACAATAACTGGATTGACC
TTTATATGTGGGTGGAGGAAACAGTGGCGAGGTTCCAAAGCCCAAATATTCGGATGTGCTTCATCACCTA
CTCCACAGACGGCCAGACTGTCTTGCCACTCACCTCAGACAAGAATAGAATAAAAAACGGTCTTGACCAA
CTTCAGAAAATTGTGCCTGACGGTCACACATTCATGCAGGCAGGATTTAGAAAGGCAATTCAACAGATCG
AAAGTTTCAACTCCGGAAACAAGGTTCCCAGCATGATTATTGCTATGACTGATGGAGAACTGGTGGCACA
TGCATTTCAGGACACTCTCAGAGAAGCTCAAAAGGCTCGGAAACTGGGGGCCAACGTTTACACCCTGGGT
GTGGCTGATTATAATCTGGATCAGATAACAGCAATTGCAGACAGCCCTGGCCACGTGTTTGCAGTGGAGA
ATGGCTTCAAGGCCCTGAGAAGCACCATTGATGCCCTCACGTCAAAGGTCTGTCTTGATGTGACATCGGT
GGAGCCTTCCTCTGAGTGTGTAGGAGAACCCTACCATGTGGTTATTCATGGAAATGGCTTTCAGAATCTA
AAGAAACGGGATGAAGTTATTTGCAGATTTATCTTCAATGAAAGCACTATCATTGATGAAAAGCCAACCA
GTATCGACAATAATTCCATGAATTGCCCTGGGCCAAAACTAGAAAAACCTGGAGAGGAGTACTCTATTGA
AGTCAGCTTGAACAAAGGCAAAACATTCTTCAAGAGCAATGTCAGCATCACCAGCACCACATGTGGCATT
TTCCGCAACTGGCTCTATTTTGTGCCACTCCTGCTGCTTGTGCCACTGCTGCTGTGTTGTGTCTGGCGGC
TGTGCCGCAAGCAGACTGTCAAGGAGCCACCACCTGTGCAGAAGCCAGAAAAGGAGCCAGAGCAGGAAAA
ACCACCATCACCACCACCACCGCCTCCGCCTCCACCACCTCCACTCCCGCCTCCGCCCCCAGCTCCTGTA
AACACCTGCCCCACTGTGATTATTTGTTGCTGTGGATGCCAAGGAGTGGGCGGGATGAGAAGGATAGAGG
GCAATCTGGATACCTTTTGTGACCTCTCTCACGCAAGCTGCCACCAGGTGCCATGGATGTGTTGTCAGAG
CAGGGACCAGGGGAGGTACCTCAGCTTAGCCCTTGCACAGTCCCAATATGCACAGGCTCCCTGCTGCCCA
AGGATCTGCTTTCCACACAGCCAGGAGTGCCTTTCCCTACCACAGGCTCCCTGCAGCCCAAGGATGTGCC
TGAGACACAGCCGGGAGTGCCTCGCCCTCAAACAGGCTCGCTGCAGCCCAAACATCTGCCTGAGACACAG
CCAACACAGCAGGGAGTGCCTTGCCCGCAAACAGGCTCCCTGCAGCCCAAGGATCTGCCTGAGACACAGC
CCGGAGTACTTTTCCCAAGCACAGACTCTGTGCAACCCAAAGAGCTGCCTTCAACCCAGCCGGGAGTGCC
TCCCCCTCACCTGCTCCTCCAGGTGCCGCCTCCCCCCAGCTAGGTGCTTGAGGCCTCCCTCCAGGATGCT
GCCGCTGCTGTCCCCACTGCTCAGGCACACGGCAGAACCCCCTTTGTCACTCCCCCCCTCAGAGCCCAAC
TTCTAA

Translation (631 aa):
MGSHESLGPYFLVFLLLLLLPPPLFRAGSLRYHGPDWRIFHRLALGSRRAHHHHGPGWRQHWRQGQAGHR
CQGSFDLYFILDKSGSVNNNWIDLYMWVEETVARFQSPNIRMCFITYSTDGQTVLPLTSDKNRIKNGLDQ
LQKIVPDGHTFMQAGFRKAIQQIESFNSGNKVPSMIIAMTDGELVAHAFQDTLREAQKARKLGANVYTLG
VADYNLDQITAIADSPGHVFAVENGFKALRSTIDALTSKVCLDVTSVEPSSECVGEPYHVVIHGNGFQNL
KKRDEVICRFIFNESTIIDEKPTSIDNNSMNCPGPKLEKPGEEYSIEVSLNKGKTFFKSNVSITSTTCGI
FRNWLYFVPLLLLVPLLLCCVWRLCRKQTVKEPPPVQKPEKEPEQEKPPSPPPPPPPPPPPLPPPPPAPV
NTCPTVIICCCGCQGVGGMRRIEGNLDTFCDLSHASCHQVPWMCCQSRDQGRYLSLALAQSQYAQAPCCP
RICFPHSQECLSLPQAPCSPRMCLRHSRECLALKQARCSPNICLRHSQHSRECLARKQAPCSPRICLRHS
PEYFSQAQTLCNPKSCLQPSRECLPLTCSSRCRLPPARCLRPPSRMLPLLSPLLRHTAEPPLSLPPSEPN
F


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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