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Report for CCDS31183.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31183.1 Public Homo sapiens 10 ZNF37A 24 110 108 CCDS HistoryNCBI Gene:7587Re-query CCDS DB by CCDS ID:31183.1Re-query CCDS DB by GeneID:7587See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31183.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000351773.7 ENSP00000329141.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000351773.7Link to Ensembl Protein Viewer:ENSP00000329141.3Re-query CCDS DB by Nucleotide ID:ENST00000351773Re-query CCDS DB by Protein ID:ENSP00000329141
Original member Current member EBI ENST00000361085.9 ENSP00000354377.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000361085.9Link to Ensembl Protein Viewer:ENSP00000354377.4Re-query CCDS DB by Nucleotide ID:ENST00000361085Re-query CCDS DB by Protein ID:ENSP00000354377
Original member Current member EBI ENST00000685332.1 ENSP00000508865.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000685332.1Link to Ensembl Protein Viewer:ENSP00000508865.1Re-query CCDS DB by Nucleotide ID:ENST00000685332Re-query CCDS DB by Protein ID:ENSP00000508865
Original member Current member NCBI NM_001007094.4 NP_001007095.1 Accepted alive Link to Nucleotide Sequence:NM_001007094.4Link to Protein Sequence:NP_001007095.1Re-query CCDS DB by Nucleotide ID:NM_001007094Re-query CCDS DB by Protein ID:NP_001007095Link to BLAST:NP_001007095.1
Original member Current member NCBI NM_001178101.3 NP_001171572.1 Accepted alive Link to Nucleotide Sequence:NM_001178101.3Link to Protein Sequence:NP_001171572.1Re-query CCDS DB by Nucleotide ID:NM_001178101Re-query CCDS DB by Protein ID:NP_001171572Link to BLAST:NP_001171572.1
Original member Current member NCBI NM_001324245.3 NP_001311174.1 Accepted alive Link to Nucleotide Sequence:NM_001324245.3Link to Protein Sequence:NP_001311174.1Re-query CCDS DB by Nucleotide ID:NM_001324245Re-query CCDS DB by Protein ID:NP_001311174Link to BLAST:NP_001311174.1
Original member Current member NCBI NM_001324246.3 NP_001311175.1 Accepted alive Link to Nucleotide Sequence:NM_001324246.3Link to Protein Sequence:NP_001311175.1Re-query CCDS DB by Nucleotide ID:NM_001324246Re-query CCDS DB by Protein ID:NP_001311175Link to BLAST:NP_001311175.1
Original member Current member NCBI NM_001324247.3 NP_001311176.1 Accepted alive Link to Nucleotide Sequence:NM_001324247.3Link to Protein Sequence:NP_001311176.1Re-query CCDS DB by Nucleotide ID:NM_001324247Re-query CCDS DB by Protein ID:NP_001311176Link to BLAST:NP_001311176.1
Original member Current member NCBI NM_001324248.3 NP_001311177.1 Accepted alive Link to Nucleotide Sequence:NM_001324248.3Link to Protein Sequence:NP_001311177.1Re-query CCDS DB by Nucleotide ID:NM_001324248Re-query CCDS DB by Protein ID:NP_001311177Link to BLAST:NP_001311177.1
Original member Current member NCBI NM_001324249.3 NP_001311178.1 Accepted alive Link to Nucleotide Sequence:NM_001324249.3Link to Protein Sequence:NP_001311178.1Re-query CCDS DB by Nucleotide ID:NM_001324249Re-query CCDS DB by Protein ID:NP_001311178Link to BLAST:NP_001311178.1
Original member Current member NCBI NM_001324250.3 NP_001311179.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001324250.3Link to Protein Sequence:NP_001311179.1Re-query CCDS DB by Nucleotide ID:NM_001324250Re-query CCDS DB by Protein ID:NP_001311179Link to BLAST:NP_001311179.1
Original member Current member NCBI NM_001324251.3 NP_001311180.1 Accepted alive Link to Nucleotide Sequence:NM_001324251.3Link to Protein Sequence:NP_001311180.1Re-query CCDS DB by Nucleotide ID:NM_001324251Re-query CCDS DB by Protein ID:NP_001311180Link to BLAST:NP_001311180.1
Original member Current member NCBI NM_003421.4 NP_003412.1 Accepted alive Link to Nucleotide Sequence:NM_003421.4Link to Protein Sequence:NP_003412.1Re-query CCDS DB by Nucleotide ID:NM_003421Re-query CCDS DB by Protein ID:NP_003412Link to BLAST:NP_003412.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001007095.1 561 P17032 561 100% 0 0
NP_001171572.1 561 P17032 561 100% 0 0
NP_001311174.1 561 P17032 561 100% 0 0
NP_001311175.1 561 P17032 561 100% 0 0
NP_001311176.1 561 P17032 561 100% 0 0
NP_001311177.1 561 P17032 561 100% 0 0
NP_001311178.1 561 P17032 561 100% 0 0
NP_001311179.1 561 P17032 561 100% 0 0
NP_001311180.1 561 P17032 561 100% 0 0
NP_003412.1 561 P17032 561 100% 0 0

Chromosomal Locations for CCDS 31183.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 38096618 38096632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 38114755 38114881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 38115195 38115290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 38117390 38118837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1686 nt):
ATGATCACATCCCAGGGATCAGTGTCGTTTAGGGATGTGACTGTGGGCTTCACTCAAGAGGAGTGGCAGC
ATCTGGACCCTGCTCAGAGGACCCTGTACAGGGATGTGATGCTGGAGAACTACAGCCACCTTGTCTCAGT
AGGGTATTGCATTCCTAAACCAGAAGTGATTCTCAAGTTGGAGAAAGGCGAGGAGCCATGGATATTAGAG
GAAAAATTTCCAAGCCAGAGTCATCTGGAATTAATTAATACCAGTAGAAACTATTCAATAATGAAGTTCA
ATGAGTTTAACAAAGGTGGAAAATGTTTCTGTGATGAAAAGCATGAAATAATTCATTCTGAAGAGGAACC
TTCTGAATATAATAAAAATGGGAACAGCTTCTGGCTGAATGAAGACCTCATTTGGCATCAGAAAATTAAA
AATTGGGAACAATCTTTTGAATACAATGAATGTGGGAAAGCTTTCCCTGAGAATTCACTCTTCCTTGTAC
ATAAGAGAGGTTACACAGGACAGAAAACCTGCAAATATACTGAACATGGGAAAACCTGTGATATGTCATT
TTTCATCACTCATCAGCAAACACATCCAAGAGAAAACCACTATGGTAATGAATGTGGAGAAAATATCTTT
GAGGAATCCATTCTCCTTGAACATCAGAGTGTTTACCCATTCAGCCAGAAGTTAAATCTCACTCCAATTC
AGAGAACCCACTCAATTAACAATATTATTGAATATAATGAGTGTGGAACATTTTTCAGTGAAAAATTAGT
CCTTCATTTACAACAGAGAACACATACAGGAGAAAAACCTTATGAATGTCATGAATGTGGAAAAACCTTC
ACCCAGAAGTCAGCCCACACAAGACATCAGAGAACACACACAGGGGGAAAACCCTATGAATGTCATGAAT
GTGGGAAGACCTTCTATAAGAATTCAGACCTCATTAAACATCAAAGAATTCATACAGGGGAGAGACCTTA
TGGATGTCATGAATGTGGGAAATCCTTCAGTGAAAAGTCAACCCTTACTCAACATCAAAGAACGCACACA
GGGGAGAAACCATATGAATGTCATGAATGTGGGAAAACCTTCTCATTTAAGTCAGTCCTTACTGTGCATC
AGAAAACACACACAGGGGAGAAGCCCTATGAATGCTATGCATGTGGGAAAGCCTTTCTCAGAAAATCAGA
CCTCATTAAACATCAAAGAATACACACAGGTGAAAAACCTTATGAATGTAATGAATGTGGGAAGTCATTC
TCTGAGAAGTCAACCCTTACTAAACATCTAAGAACTCACACAGGTGAGAAACCTTATGAATGTATTCAGT
GTGGAAAATTTTTCTGCTACTACTCCGGTTTCACAGAACATCTGAGAAGACACACAGGGGAGAAACCTTT
TGGATGTAATGAATGTGGGAAAACCTTCCGTCAGAAGTCAGCCCTAATTGTTCACCAGAGAACTCATATA
AGACAGAAACCCTATGGATGTAATCAATGTGGAAAATCATTCTGTGTGAAGTCAAAACTCATTGCACATC
ATAGAACACACACAGGGGAGAAACCCTATGAATGTAATGTTTGTGGAAAATCATTCTATGTTAAGTCAAA
ACTAACTGTACATCAGAGAATACACTTGGGGAGAAACCCTATAAATGTAGTAAACGAGGGAAATTACTCT
GGGTGA

Translation (561 aa):
MITSQGSVSFRDVTVGFTQEEWQHLDPAQRTLYRDVMLENYSHLVSVGYCIPKPEVILKLEKGEEPWILE
EKFPSQSHLELINTSRNYSIMKFNEFNKGGKCFCDEKHEIIHSEEEPSEYNKNGNSFWLNEDLIWHQKIK
NWEQSFEYNECGKAFPENSLFLVHKRGYTGQKTCKYTEHGKTCDMSFFITHQQTHPRENHYGNECGENIF
EESILLEHQSVYPFSQKLNLTPIQRTHSINNIIEYNECGTFFSEKLVLHLQQRTHTGEKPYECHECGKTF
TQKSAHTRHQRTHTGGKPYECHECGKTFYKNSDLIKHQRIHTGERPYGCHECGKSFSEKSTLTQHQRTHT
GEKPYECHECGKTFSFKSVLTVHQKTHTGEKPYECYACGKAFLRKSDLIKHQRIHTGEKPYECNECGKSF
SEKSTLTKHLRTHTGEKPYECIQCGKFFCYYSGFTEHLRRHTGEKPFGCNECGKTFRQKSALIVHQRTHI
RQKPYGCNQCGKSFCVKSKLIAHHRTHTGEKPYECNVCGKSFYVKSKLTVHQRIHLGRNPINVVNEGNYS
G


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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