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Report for CCDS42092.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42092.1 Public Homo sapiens 16 WDR90 24 110 108 CCDS HistoryNCBI Gene:197335Re-query CCDS DB by CCDS ID:42092.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42092.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000293879.9 ENSP00000293879.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000293879.9Link to Ensembl Protein Viewer:ENSP00000293879.4Re-query CCDS DB by Nucleotide ID:ENST00000293879Re-query CCDS DB by Protein ID:ENSP00000293879
Original member Current member NCBI NM_145294.5 NP_660337.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145294.5Link to Protein Sequence:NP_660337.3Re-query CCDS DB by Nucleotide ID:NM_145294Re-query CCDS DB by Protein ID:NP_660337Link to BLAST:NP_660337.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_660337.3 1748 Q96KV7-1 1748 100% 0 0

Chromosomal Locations for CCDS 42092.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 649417 649426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 649763 649854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 649991 650167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 650254 650362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 650539 650709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 650995 651103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 651199 651266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 651644 651747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 651827 652039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 652467 652535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 653341 653451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 653525 653670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 653746 653803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 655029 655147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 655307 655468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 655573 655703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 655773 655889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 656302 656537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 656732 656871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 657091 657221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 657762 657892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 658183 658344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 658525 658653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 658896 659011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 659086 659126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 659245 659376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 660058 660161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 660612 660714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 661051 661172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 661342 661501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 661597 661787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 661891 662059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 662220 662331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 662679 662844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 665679 665801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 665950 666124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 666220 666350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 666455 666598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 666673 666792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 666905 666989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 667432 667589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5247 nt):
ATGGCCCGAGCGTGGCAGCACCCGTTCCTCAACGTCTTCAGACACTTCCGGGTGGACGAGTGGAAGCGCT
CCGCCAAGCAGGGGGACGTGGCCGTGGTCACGGACAAGACCCTGAAGGGCGCCGTGTATCGCATTCGGGG
CTCAGTCTCTGCCGCCAACTACATCCAGCTCCCTAAGAGCAGCACCCAGTCTCTGGGGCTGACGGGACGA
TACCTGTATGTGCTCTTTCGGCCCCTGCCCAGCAAGCACTTCGTCATCCACCTCGATGTGTCCTCCAAGG
ACAACCAAGTCATCCGTGTGTCTTTCTCCAACCTCTTCAAGGAGTTTAAGTCTACGGCCACGTGGCTCCA
GTTTCCCTTGGTCCTGGAGGCCAGGACACCTCAGAGAGATCTGGTGGGTTTGGCCCCCTCCGGAGCCCGC
TGGACCTGCCTGCAGCTCGATCTGCAGGACGTTCTCCTGGTCTACCTGAACCGGTGCTACGGCCATCTCA
AGAGCATCAGGCTGTGCGCCAGCCTGCTGGTCAGGAACCTGTACACCAGTGACCTGTGCTTTGAGCCTGC
CATCTCTGGGGCCCAGTGGGCAAAGCTGCCCGTGACTCCTATGCCTCGGGAAATGGCATTCCCTGTGCCC
AAGGGAGAGAGCTGGCATGACCGCTACATCCACGTCCGGTTTCCAAGTGAGAGCTTGAAAGTGCCTTCCA
AGCCGATTGAGAAGAGCTGTTCCCCTCCTGAGGCAGTCCTCCTGGGGCCGGGGCCACAGCCTCTCCCTTG
CCCGGTGGCCTCCAGCAAACCTGTGCGGTTCAGTGTGTCTCCAGTGGTCCAGACGCCCAGCCCCACAGCC
TCCGGCCGGGCCGCCTTGGCACCCAGGCCCTTCCCGGAGGTCAGCCTGTCCCAAGAGCGCTCAGACGCCT
CCAACGCGGATGGCCCCGGTTTCCATAGCCTTGAGCCCTGGGCCCAGCTGGAGGCCTCTGACATCCACAC
GGCTGCTGCCGGCACCCACGTGTTGACTCACGAGTCGGCTGAGGTGCCCGTGGCCCGCACCGGCTCCTGC
GAAGGCTTCCTCCCAGACCCAGTCCTGAGGCTCAAGGGCGTCATCGGCTTTGGGGGCCACGGCACCAGAC
AGGCCCTGTGGACCCCAGACGGGGCGGCTGTCGTGTACCCCTGCCATGCGGTCATCGTCGTCCTGCTCGT
GGACACGGGGGAGCAGCGCTTCTTCCTTGGCCACACAGACAAGGTCTCCGCCCTGGCGCTGGATGGCAGC
AGCTCACTATTGGCCTCGGCCCAGGCAAGGGCCCCTAGTGTGATGCGGCTCTGGGACTTCCAGACCGGGC
GGTGCTTGTGCCTGTTCCGGAGCCCAATGCACGTTGTCTGCTCTCTCAGCTTCTCTGACAGCGGGGCCCT
TCTCTGCGGGGTTGGCAAGGACCACCACGGGAGGACGATGGTGGTGGCCTGGGGCACCGGCCAGGTGGGC
CTCGGTGGCGAGGTGGTCGTTCTGGCAAAGGCGCACACTGACTTTGACGTCCAGGCCTTCCGGGTCACCT
TTTTTGATGAAACCAGGATGGCGTCGTGCGGGCAGGGCAGTGTGCGGCTCTGGCGGCTGCGTGGCGGGGT
GCTGCGTTCCTGCCCCGTGGACTTAGGGGAGCACCACGCGCTGCAGTTCACCGACCTGGCCTTCAAGCAG
GCCCGGGACGGCTGCCCGGAGCCCTCGGCTGCCATGCTCTTCGTGTGCAGCCGCAGTGGCCACATCTTGG
AGATTGACTGTCAGCGCATGGTCGTGCGGCATGCCCGCCGCCTGCTCCCCACACGGACTCCAGGCGGTCC
CCACCCACAGAAGCAGACCTTCAGCTCAGGCCCCGGCATTGCCATCAGCAGCCTCAGCGTCTCCCCGGCC
ATGTGTGCTGTGGGCTCTGAGGACGGCTTCTTGCGGCTCTGGCCCCTGGACTTCTCCTCGGTGCTCCTGG
AGGCAGAGCACGAGGGCCCCGTCAGCTCAGTCTGTGTCAGCCCCGATGGCCTCCGTGTGCTGTCTGCCAC
CTCCTCGGGCCACCTGGGCTTCCTGGACACGCTGTCCCGGGTGTACCACATGCTGGCTCGCTCCCACACC
GCCCCGGTGTTGGCCCTCGCCATGGAGCAGAGGCGGGGACAGCTGGCCACCGTGTCCCAGGACCGTACCG
TCCGCATCTGGGACCTGGCCACCCTGCAGCAGCTATACGACTTCACATCATCAGAGGACGCCCCGTGCGC
TGTCACCTTCCACCCCACAAGGCCAACCTTTTTCTGTGGCTTTAGCAGTGGGGCCGTGCGCTCCTTCAGC
CTGGAGGCCGCTGAGGTCCTGGTGGAACACACGTGCCACCGAGGAGCTGTCACCGGCCTGACCGCCACCC
CTGACGGCCGCCTGCTCTTCAGCTCCTGCTCCCAGGGCTCCCTGGCCCAGTACAGCTGTGCGGACCCCCA
GTGGCATGTCCTCCGAGTGGCAGCGGACATGGTATGCCCGGATGCCCCCGCGAGCCCCAGCGCCCTGGCA
GTCAGCAGGGATGGCCGCCTGCTGGCCTTTGTGGGACCCTCCAGGTGCACAGTGACAGTCATGGGCTCGG
CCTCCCTTGATGAGCTGCTGCGAGTTGACATCGGCACTCTGGACCTGGCCAGCAGCCGCCTGGACTCAGC
CATGGCTGTGTGCTTTGGCCCTGCAGCTCTGGGCCACCTGCTGGTGTCCACCTCGTCCAACAGAGTCGTG
GTGCTGGATGCTGTGTCGGGCCGCATCATCCGGGAGCTGCCCGGTGTCCACCCTGAGCCCTGCCCCTCCT
TGACGCTCAGTGAGGACGCCCGCTTCCTGCTGATTGCCGCCGGCCGGACCATCAAGGTGTGGGACTACGC
CACACAGGCCAGCCCAGGCCCCCAGGTGTACATCGGCCACTCGGAACCCGTGCAGGCTGTGGCCTTCTCT
CCTGACCAGCAGCAGGTCCTCAGCGCAGGGGACGCCGTCTTCCTCTGGGATGTCCTGGCCCCTACTGAGA
GCGACCAAAGCTTCCCCGGGGCCCCCCCAGCCTGCAAGACAGGCCCGGGCGCAGGACCGCTGGAGGACGC
AGCGTCCAGGGCCAGCGAGCTCCCCCGGCAGCAGGTCCCCAAGCCATGTCAGGCATCTCCACCACGGCTG
GGCGTCTGTGCCAGGCCTCCCGAAGGTGGCGATGGCGCCAGGGACACCAGGAATTCGGGGGCCCCACGCA
CCACCTACCTGGCTTCCTGCAAGGCCTTCACGCCTGCCAGGGTCAGCTGCAGCCCCCACTCTGCCAAGGG
CACTTGCCCGCCTCCCGCCAGCGGTGGGTGGCTGCGTCTGAAGGCTGTCGTCGGTTACAGCGGGAATGGG
CGGGCCAACATGGTCTGGAGGCCGGACACAGGCTTCTTTGCCTACACGTGCGGCCGCCTGGTGGTGGTGG
AGGACCTGCACTCTGGCGCCCAGCAGCACTGGTCCGGCCACTCTGCGGAGATCTCCACGCTGGCCCTCAG
CCACAGTGCCCAGGTCCTGGCCTCTGCCTCGGGCCGAAGCAGCACGACCGCCCATTGTCAGATCCGCGTC
TGGGACGTGTCTGGCGGCCTCTGCCAGCATCTCATTTTCCCCCATAGCACCACCGTGCTGGCCCTGGCCT
TCTCACCAGATGACAGGCTTCTTGTCACACTGGGGGACCACGATGGCCGCACCCTCGCCCTGTGGGGCAC
GGCCACCTATGACCTCGTGTCCTCCACCCGCCTCCCGGAGCCGGTGCATGGTGTGGCCTTCAACCCCTGG
GACGCCGGCGAGCTCACCTGTGTGGGCCAGGGCACTGTCACCTTCTGGCTCCTTCAGCAGCGTGGGGCAG
ACATCAGCCTTCAGGTGCGTCGAGAGCCAGTCCCAGAGGCAGTGGGGGCTGGAGAGCTGACCTCGCTCTG
CTACGGGGCACCTCCCCTGCTCTATTGTGGCACCAGCTCTGGCCAGGTCTGTGTCTGGGACACGCGTGCC
GGCCGCTGCTTCTTGTCCTGGGAGGCGGATGACGGTGGCATTGGGCTGTTGCTGTTCTCGGGTTCTCGAT
TGGTCAGCGGCAGCAGCACGGGGCGGCTGCGCCTGTGGGCCGTGGGGGCTGTGTCGGAGCTGAGGTGCAA
GGGCTCAGGCGCCAGTTCTGTGTTCATGGAACACGAGCTGGTGCTGGACGGGGCTGTGGTGAGTGCCAGC
TTCGATGACAGCGTGGACATGGGCGTCGTGGGCACCACGGCGGGCACGCTGTGGTTTGTCAGCTGGGCCG
AGGGCACCAGCACACGTCTCATCAGTGGCCACAGGAGCAAGGTGAACGAGGTGGTCTTCAGCCCCGGGGA
GTCCCACTGCGCCACATGCAGTGAGGATGGGAGTGTGCGGGTGTGGGCCTTGGCCAGCATGGAGCTTGTG
ATCCAGTTCCAGGTGCTGAACCAGAGCTGCCTCTGCCTGGCATGGAGCCCCCCGTGCTGTGGCCGCCCTG
AGCAGCAGCGGCTAGCGGCTGGCTACGGTGACGGCTCCCTGCGCATCTTCAGCGTCTCCCGCACGGCCAT
GGAGCTCAAGATGCACCCCCACCCGGTGGCGCTGACCACTGTTGCCTTCTCCACCGATGGTCAGACTGTC
CTCTCTGGAGACAAGGATGGGCTCGTGGCTGTGAGCCACCCCTGCACAGGGACAACCTTCCGTGTGCTGA
GTGACCACCAGGGCGCCCCAATCTCTACCATCTGTGTCACGTGCAAAGAGTGTGAAGACTTAGGGGTGGA
GGGCACAGACCTATGGCTGGCTGCCAGTGGGGACCAGCGGGTCAGCGTCTGGGCCTCCGACTGGCTGCGG
AACCACTGTGAGCTTGTGGACTGGTTGAGTTTCCCAATGCCTGCCACCACGGAGACTCAGGGCCACCTGC
CACCCTCCCTCGCTGCCTTCTGCCCTTGGGATGGGGCGCTCCTGATGTACGTGGGCCCCGGTGTTTACAA
GGAGGTGATCATCTACAACCTCTGCCAGAAGCAGGTGGTGGAGAAGATACCACTGCCCTTTTTTGCCATG
TCCCTGAGCCTGTCCCCCGGGACCCACCTCCTGGCTGTTGGCTTTGCTGAGTGCATGCTGAGGCTGGTAG
ACTGTGCCATGGGGACTGCCCAAGACTTTGCCGGCCACGACAACGCAGTGCACCTGTGCAGGTTTACACC
GTCCGCCAGGCTGCTCTTCACGGCCGCCCGCAACGAGATCCTTGTGTGGGAGGTCCCCGGCCTCTGA

Translation (1748 aa):
MARAWQHPFLNVFRHFRVDEWKRSAKQGDVAVVTDKTLKGAVYRIRGSVSAANYIQLPKSSTQSLGLTGR
YLYVLFRPLPSKHFVIHLDVSSKDNQVIRVSFSNLFKEFKSTATWLQFPLVLEARTPQRDLVGLAPSGAR
WTCLQLDLQDVLLVYLNRCYGHLKSIRLCASLLVRNLYTSDLCFEPAISGAQWAKLPVTPMPREMAFPVP
KGESWHDRYIHVRFPSESLKVPSKPIEKSCSPPEAVLLGPGPQPLPCPVASSKPVRFSVSPVVQTPSPTA
SGRAALAPRPFPEVSLSQERSDASNADGPGFHSLEPWAQLEASDIHTAAAGTHVLTHESAEVPVARTGSC
EGFLPDPVLRLKGVIGFGGHGTRQALWTPDGAAVVYPCHAVIVVLLVDTGEQRFFLGHTDKVSALALDGS
SSLLASAQARAPSVMRLWDFQTGRCLCLFRSPMHVVCSLSFSDSGALLCGVGKDHHGRTMVVAWGTGQVG
LGGEVVVLAKAHTDFDVQAFRVTFFDETRMASCGQGSVRLWRLRGGVLRSCPVDLGEHHALQFTDLAFKQ
ARDGCPEPSAAMLFVCSRSGHILEIDCQRMVVRHARRLLPTRTPGGPHPQKQTFSSGPGIAISSLSVSPA
MCAVGSEDGFLRLWPLDFSSVLLEAEHEGPVSSVCVSPDGLRVLSATSSGHLGFLDTLSRVYHMLARSHT
APVLALAMEQRRGQLATVSQDRTVRIWDLATLQQLYDFTSSEDAPCAVTFHPTRPTFFCGFSSGAVRSFS
LEAAEVLVEHTCHRGAVTGLTATPDGRLLFSSCSQGSLAQYSCADPQWHVLRVAADMVCPDAPASPSALA
VSRDGRLLAFVGPSRCTVTVMGSASLDELLRVDIGTLDLASSRLDSAMAVCFGPAALGHLLVSTSSNRVV
VLDAVSGRIIRELPGVHPEPCPSLTLSEDARFLLIAAGRTIKVWDYATQASPGPQVYIGHSEPVQAVAFS
PDQQQVLSAGDAVFLWDVLAPTESDQSFPGAPPACKTGPGAGPLEDAASRASELPRQQVPKPCQASPPRL
GVCARPPEGGDGARDTRNSGAPRTTYLASCKAFTPARVSCSPHSAKGTCPPPASGGWLRLKAVVGYSGNG
RANMVWRPDTGFFAYTCGRLVVVEDLHSGAQQHWSGHSAEISTLALSHSAQVLASASGRSSTTAHCQIRV
WDVSGGLCQHLIFPHSTTVLALAFSPDDRLLVTLGDHDGRTLALWGTATYDLVSSTRLPEPVHGVAFNPW
DAGELTCVGQGTVTFWLLQQRGADISLQVRREPVPEAVGAGELTSLCYGAPPLLYCGTSSGQVCVWDTRA
GRCFLSWEADDGGIGLLLFSGSRLVSGSSTGRLRLWAVGAVSELRCKGSGASSVFMEHELVLDGAVVSAS
FDDSVDMGVVGTTAGTLWFVSWAEGTSTRLISGHRSKVNEVVFSPGESHCATCSEDGSVRVWALASMELV
IQFQVLNQSCLCLAWSPPCCGRPEQQRLAAGYGDGSLRIFSVSRTAMELKMHPHPVALTTVAFSTDGQTV
LSGDKDGLVAVSHPCTGTTFRVLSDHQGAPISTICVTCKECEDLGVEGTDLWLAASGDQRVSVWASDWLR
NHCELVDWLSFPMPATTETQGHLPPSLAAFCPWDGALLMYVGPGVYKEVIIYNLCQKQVVEKIPLPFFAM
SLSLSPGTHLLAVGFAECMLRLVDCAMGTAQDFAGHDNAVHLCRFTPSARLLFTAARNEILVWEVPGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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