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Report for CCDS10628.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10628.2 Public Homo sapiens 16 NSMCE1 24 110 108 CCDS HistoryNCBI Gene:197370Re-query CCDS DB by CCDS ID:10628.2See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 10628.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361439.9 ENSP00000355077.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361439.9Link to Ensembl Protein Viewer:ENSP00000355077.4Re-query CCDS DB by Nucleotide ID:ENST00000361439Re-query CCDS DB by Protein ID:ENSP00000355077
Original member Current member NCBI NM_145080.4 NP_659547.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145080.4Link to Protein Sequence:NP_659547.2Re-query CCDS DB by Nucleotide ID:NM_145080Re-query CCDS DB by Protein ID:NP_659547Link to BLAST:NP_659547.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_659547.2 266 Q8WV22 266 100% 0 0

Chromosomal Locations for CCDS 10628.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 27225157 27225236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27225726 27225846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27226720 27226836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27233001 27233147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27234188 27234265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27235178 27235299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 27257435 27257570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (801 nt):
ATGCAGGGCAGCACAAGGAGAATGGGCGTCATGACTGATGTCCACCGGCGCTTCCTCCAGTTGCTGATGA
CCCATGGCGTGCTAGAGGAATGGGACGTGAAGCGCTTGCAGACGCACTGCTACAAGGTCCATGACCGCAA
TGCCACCGTAGATAAGTTGGAGGACTTCATCAACAACATTAACAGTGTCTTGGAGTCCTTGTATATTGAG
ATAAAGAGAGGAGTCACGGAAGATGATGGGAGACCCATTTATGCGTTGGTGAATCTTGCTACAACTTCAA
TTTCCAAAATGGCTACGGATTTTGCAGAGAATGAACTGGATTTGTTTAGAAAGGCTCTGGAACTGATTAT
TGACTCAGAAACCGGCTTTGCGTCTTCCACAAACATATTGAACCTGGTTGATCAACTTAAAGGCAAGAAG
ATGAGGAAGAAGGAAGCGGAGCAGGTGCTGCAGAAGTTTGTTCAAAACAAGTGGCTGATTGAGAAGGAAG
GGGAGTTCACCCTGCACGGCCGGGCCATCCTGGAGATGGAGCAATACATCCGGGAGACGTACCCCGACGC
GGTGAAGATCTGCAATATCTGTCACAGCCTCCTCATCCAGGGTCAAAGCTGCGAAACCTGTGGGATCAGG
ATGCACTTACCCTGCGTGGCCAAGTACTTCCAGTCGAATGCTGAACCGCGCTGCCCCCACTGCAACGACT
ACTGGCCCCACGAGATCCCAAAAGTCTTCGACCCTGAGAAGGAGAGGGAGTCTGGTGTCTTGAAATCGAA
CAAAAAGTCCCTGCGGTCCAGGCAGCATTAG

Translation (266 aa):
MQGSTRRMGVMTDVHRRFLQLLMTHGVLEEWDVKRLQTHCYKVHDRNATVDKLEDFINNINSVLESLYIE
IKRGVTEDDGRPIYALVNLATTSISKMATDFAENELDLFRKALELIIDSETGFASSTNILNLVDQLKGKK
MRKKEAEQVLQKFVQNKWLIEKEGEFTLHGRAILEMEQYIRETYPDAVKICNICHSLLIQGQSCETCGIR
MHLPCVAKYFQSNAEPRCPHCNDYWPHEIPKVFDPEKERESGVLKSNKKSLRSRQH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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