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Report for CCDS53765.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53765.1 Public Homo sapiens 12 RASSF8 24 110 108 CCDS HistoryNCBI Gene:11228Re-query CCDS DB by CCDS ID:53765.1Re-query CCDS DB by GeneID:11228See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53765.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000282884.13 ENSP00000282884.9 Accepted alive Link to Ensembl Transcript Viewer:ENST00000282884.13Link to Ensembl Protein Viewer:ENSP00000282884.9Re-query CCDS DB by Nucleotide ID:ENST00000282884Re-query CCDS DB by Protein ID:ENSP00000282884
Original member Current member EBI ENST00000405154.6 ENSP00000384491.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000405154.6Link to Ensembl Protein Viewer:ENSP00000384491.1Re-query CCDS DB by Nucleotide ID:ENST00000405154Re-query CCDS DB by Protein ID:ENSP00000384491
Original member Current member EBI ENST00000542865.5 ENSP00000439839.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000542865.5Link to Ensembl Protein Viewer:ENSP00000439839.1Re-query CCDS DB by Nucleotide ID:ENST00000542865Re-query CCDS DB by Protein ID:ENSP00000439839
Original member Current member EBI ENST00000541490.5 ENSP00000443096.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000541490.5Link to Ensembl Protein Viewer:ENSP00000443096.1Re-query CCDS DB by Nucleotide ID:ENST00000541490Re-query CCDS DB by Protein ID:ENSP00000443096
Original member Current member EBI ENST00000688511.1 ENSP00000509001.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000688511.1Link to Ensembl Protein Viewer:ENSP00000509001.1Re-query CCDS DB by Nucleotide ID:ENST00000688511Re-query CCDS DB by Protein ID:ENSP00000509001
Original member Current member EBI ENST00000689434.1 ENSP00000509645.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000689434.1Link to Ensembl Protein Viewer:ENSP00000509645.1Re-query CCDS DB by Nucleotide ID:ENST00000689434Re-query CCDS DB by Protein ID:ENSP00000509645
Original member Current member EBI ENST00000689635.1 ENSP00000510086.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000689635.1Link to Ensembl Protein Viewer:ENSP00000510086.1Re-query CCDS DB by Nucleotide ID:ENST00000689635Re-query CCDS DB by Protein ID:ENSP00000510086
Original member Current member NCBI NM_001164746.2 NP_001158218.1 Accepted alive Link to Nucleotide Sequence:NM_001164746.2Link to Protein Sequence:NP_001158218.1Re-query CCDS DB by Nucleotide ID:NM_001164746Re-query CCDS DB by Protein ID:NP_001158218Link to BLAST:NP_001158218.1
Original member Current member NCBI NM_001164747.2 NP_001158219.1 Accepted alive Link to Nucleotide Sequence:NM_001164747.2Link to Protein Sequence:NP_001158219.1Re-query CCDS DB by Nucleotide ID:NM_001164747Re-query CCDS DB by Protein ID:NP_001158219Link to BLAST:NP_001158219.1
Original member Current member NCBI NM_001164748.2 NP_001158220.1 Accepted alive Link to Nucleotide Sequence:NM_001164748.2Link to Protein Sequence:NP_001158220.1Re-query CCDS DB by Nucleotide ID:NM_001164748Re-query CCDS DB by Protein ID:NP_001158220Link to BLAST:NP_001158220.1
Original member Current member NCBI NM_001394094.1 NP_001381023.1 Accepted alive Link to Nucleotide Sequence:NM_001394094.1Link to Protein Sequence:NP_001381023.1Re-query CCDS DB by Nucleotide ID:NM_001394094Re-query CCDS DB by Protein ID:NP_001381023Link to BLAST:NP_001381023.1
Original member Current member NCBI NM_001394095.1 NP_001381024.1 Accepted alive Link to Nucleotide Sequence:NM_001394095.1Link to Protein Sequence:NP_001381024.1Re-query CCDS DB by Nucleotide ID:NM_001394095Re-query CCDS DB by Protein ID:NP_001381024Link to BLAST:NP_001381024.1
Original member Current member NCBI NM_001394096.1 NP_001381025.1 Accepted alive Link to Nucleotide Sequence:NM_001394096.1Link to Protein Sequence:NP_001381025.1Re-query CCDS DB by Nucleotide ID:NM_001394096Re-query CCDS DB by Protein ID:NP_001381025Link to BLAST:NP_001381025.1
Original member Current member NCBI NM_001394097.1 NP_001381026.1 Accepted alive Link to Nucleotide Sequence:NM_001394097.1Link to Protein Sequence:NP_001381026.1Re-query CCDS DB by Nucleotide ID:NM_001394097Re-query CCDS DB by Protein ID:NP_001381026Link to BLAST:NP_001381026.1
Original member Current member NCBI NM_001394098.1 NP_001381027.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001394098.1Link to Protein Sequence:NP_001381027.1Re-query CCDS DB by Nucleotide ID:NM_001394098Re-query CCDS DB by Protein ID:NP_001381027Link to BLAST:NP_001381027.1
Original member Current member NCBI NM_001394099.1 NP_001381028.1 Accepted alive Link to Nucleotide Sequence:NM_001394099.1Link to Protein Sequence:NP_001381028.1Re-query CCDS DB by Nucleotide ID:NM_001394099Re-query CCDS DB by Protein ID:NP_001381028Link to BLAST:NP_001381028.1
Original member Current member NCBI NM_001394100.1 NP_001381029.1 Accepted alive Link to Nucleotide Sequence:NM_001394100.1Link to Protein Sequence:NP_001381029.1Re-query CCDS DB by Nucleotide ID:NM_001394100Re-query CCDS DB by Protein ID:NP_001381029Link to BLAST:NP_001381029.1
Original member Current member NCBI NM_001394101.1 NP_001381030.1 Accepted alive Link to Nucleotide Sequence:NM_001394101.1Link to Protein Sequence:NP_001381030.1Re-query CCDS DB by Nucleotide ID:NM_001394101Re-query CCDS DB by Protein ID:NP_001381030Link to BLAST:NP_001381030.1
Original member Current member NCBI NM_001394102.1 NP_001381031.1 Accepted alive Link to Nucleotide Sequence:NM_001394102.1Link to Protein Sequence:NP_001381031.1Re-query CCDS DB by Nucleotide ID:NM_001394102Re-query CCDS DB by Protein ID:NP_001381031Link to BLAST:NP_001381031.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001158218.1 419 Q8NHQ8-1 419 100% 0 0
NP_001158219.1 419 Q8NHQ8-1 419 100% 0 0
NP_001158220.1 419 Q8NHQ8-1 419 100% 0 0
NP_001381023.1 419 Q8NHQ8-1 419 100% 0 0
NP_001381024.1 419 Q8NHQ8-1 419 100% 0 0
NP_001381025.1 419 Q8NHQ8-1 419 100% 0 0
NP_001381026.1 419 Q8NHQ8-1 419 100% 0 0
NP_001381027.1 419 Q8NHQ8-1 419 100% 0 0
NP_001381028.1 419 Q8NHQ8-1 419 100% 0 0
NP_001381029.1 419 Q8NHQ8-1 419 100% 0 0
NP_001381030.1 419 Q8NHQ8-1 419 100% 0 0
NP_001381031.1 419 Q8NHQ8-1 419 100% 0 0

Chromosomal Locations for CCDS 53765.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 26055344 26055446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 26064498 26065387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 26067569 26067713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 26068697 26068818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1260 nt):
ATGGAACTTAAAGTATGGGTGGATGGAGTTCAGAGGATTGTTTGTGGAGTCACTGAAGTCACAACTTGCC
AGGAGGTTGTCATAGCCTTAGCTCAAGCAATAGGTCGAACTGGAAGGTACACCCTTATAGAGAAATGGAG
AGATACTGAAAGACACTTAGCACCTCATGAAAATCCTATCATATCCTTAAACAAATGGGGGCAGTATGCT
AGTGATGTGCAGCTCATTCTACGACGAACTGGGCCGTCTCTCAGTGAGCGACCCACTTCAGACAGTGTGG
CTCGAATTCCTGAAAGAACTTTATACAGGCAGAGTCTGCCCCCCTTAGCTAAACTGAGGCCTCAGATTGA
CAAATCAATCAAAAGGAGGGAACCGAAAAGGAAATCACTGACATTTACAGGAGGTGCCAAAGGATTAATG
GACATTTTTGGAAAAGGTAAAGAAACTGAGTTTAAGCAAAAGGTGCTGAATAACTGCAAAACAACAGCAG
ATGAGTTGAAGAAGCTAATCCGTCTGCAGACAGAGAAGCTTCAATCCATTGAGAAACAGCTGGAATCTAA
TGAAATAGAAATAAGATTTTGGGAGCAAAAGTATAATTCCAACCTTGAAGAGGAAATTGTCCGTCTAGAG
CAAAAGATCAAAAGAAACGATGTAGAAATTGAGGAGGAAGAATTCTGGGAAAATGAATTACAGATTGAAC
AGGAAAATGAAAAACAGCTGAAGGATCAACTTCAAGAAATAAGACAGAAAATAACAGAATGTGAAAACAA
ATTAAAGGACTATTTGGCACAGATCCGGACTATGGAAAGTGGTCTTGAAGCAGAAAAATTGCAACGGGAA
GTTCAAGAGGCACAGGTCAATGAGGAAGAGGTTAAAGGAAAGATCGGTAAGGTCAAAGGGGAGATTGACA
TTCAAGGCCAGCAGAGTCTGAGGTTGGAAAATGGCATCAAAGCTGTGGAAAGATCTCTTGGACAAGCCAC
CAAACGCTTACAGGACAAAGAACAGGAACTGGAGCAGTTGACTAAGGAGTTGCGGCAAGTCAATCTCCAG
CAGTTCATCCAGCAGACAGGGACAAAAGTTACCGTTTTGCCAGCGGAGCCCATTGAAATAGAGGCCTCAC
ATGCAGACATTGAAAGGGAGGCACCATTCCAGTCTGGGTCCCTGAAGCGACCTGGTTCATCTCGGCAGCT
CCCCAGTAATCTCCGCATTCTGCAGAATCCTATCTCATCTGGTTTTAATCCTGAAGGCATATATGTATGA

Translation (419 aa):
MELKVWVDGVQRIVCGVTEVTTCQEVVIALAQAIGRTGRYTLIEKWRDTERHLAPHENPIISLNKWGQYA
SDVQLILRRTGPSLSERPTSDSVARIPERTLYRQSLPPLAKLRPQIDKSIKRREPKRKSLTFTGGAKGLM
DIFGKGKETEFKQKVLNNCKTTADELKKLIRLQTEKLQSIEKQLESNEIEIRFWEQKYNSNLEEEIVRLE
QKIKRNDVEIEEEEFWENELQIEQENEKQLKDQLQEIRQKITECENKLKDYLAQIRTMESGLEAEKLQRE
VQEAQVNEEEVKGKIGKVKGEIDIQGQQSLRLENGIKAVERSLGQATKRLQDKEQELEQLTKELRQVNLQ
QFIQQTGTKVTVLPAEPIEIEASHADIEREAPFQSGSLKRPGSSRQLPSNLRILQNPISSGFNPEGIYV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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