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Report for CCDS5890.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5890.1 Public Homo sapiens 7 C7orf33 24 110 108 CCDS HistoryNCBI Gene:202865Re-query CCDS DB by CCDS ID:5890.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5890.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307003.3 ENSP00000304071.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000307003.3Link to Ensembl Protein Viewer:ENSP00000304071.2Re-query CCDS DB by Nucleotide ID:ENST00000307003Re-query CCDS DB by Protein ID:ENSP00000304071
Original member Current member NCBI NM_145304.4 NP_660347.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145304.4Link to Protein Sequence:NP_660347.1Re-query CCDS DB by Nucleotide ID:NM_145304Re-query CCDS DB by Protein ID:NP_660347Link to BLAST:NP_660347.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_660347.1 177 Q8WU49 177 100% 0 0

Chromosomal Locations for CCDS 5890.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 148590926 148591129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 148614042 148614296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 148615327 148615401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (534 nt):
ATGCAAGTGGAAGTTCAAAGCCTCAGCCTTGAAGAGTGTCCCTGGAGACTTCCAGGCCCCCAATGTGAAT
GTGAAGCCCTCCTGCCCAGTGGGGCAAGGCGCCGGATTGACCTTCGCCTGAGTGGGAGGGCAGTCGCTGT
TTGGGTCCACGTTAGGGGCGGTCCAGGTCAATTTAACTTGTCATATGCCACGGGAAGACATAAGAAGCCA
AACCCACACCAAAACATGAACCGGGGGATGGAATTTATTGCTCCTGTATCAGCTCCCACCAAATCTGGTG
CCCCGTGGCATTTTCTTTCTCAAGGTCCCACGGATGCCCAGAGAGCAGTCAGAATCAGGCCAGGCACCAG
GATGGGCTTGTCCTCAGATCCAGTTGTCGGCACCTTGTCTTCCAGTTACCTAGATCTGCTAACTCTCTCT
TACAAGCCTGGGAGGACAGTGACAAGTTCATACCTAAACGTACGTGGGCATGAAGTAAGAAAGCTCCAGA
ATTCTGTTGAGGCCACAAGGATTTCCAGAACTGACAGCAGTTAA

Translation (177 aa):
MQVEVQSLSLEECPWRLPGPQCECEALLPSGARRRIDLRLSGRAVAVWVHVRGGPGQFNLSYATGRHKKP
NPHQNMNRGMEFIAPVSAPTKSGAPWHFLSQGPTDAQRAVRIRPGTRMGLSSDPVVGTLSSSYLDLLTLS
YKPGRTVTSSYLNVRGHEVRKLQNSVEATRISRTDSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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