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Report for CCDS44603.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44603.1 Public Homo sapiens 11 BTBD18 24 110 108 CCDS HistoryNCBI Gene:643376Re-query CCDS DB by CCDS ID:44603.1Re-query CCDS DB by GeneID:643376See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44603.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000422652.6 ENSP00000394472.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000422652.6Link to Ensembl Protein Viewer:ENSP00000394472.1Re-query CCDS DB by Nucleotide ID:ENST00000422652Re-query CCDS DB by Protein ID:ENSP00000394472
Original member Current member EBI ENST00000436147.3 ENSP00000397020.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000436147.3Link to Ensembl Protein Viewer:ENSP00000397020.2Re-query CCDS DB by Nucleotide ID:ENST00000436147Re-query CCDS DB by Protein ID:ENSP00000397020
Original member Current member EBI ENST00000527995.2 ENSP00000432341.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000527995.2Link to Ensembl Protein Viewer:ENSP00000432341.2Re-query CCDS DB by Nucleotide ID:ENST00000527995Re-query CCDS DB by Protein ID:ENSP00000432341
Original member Current member NCBI NM_001145101.3 NP_001138573.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001145101.3Link to Protein Sequence:NP_001138573.1Re-query CCDS DB by Nucleotide ID:NM_001145101Re-query CCDS DB by Protein ID:NP_001138573Link to BLAST:NP_001138573.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138573.1 712 B2RXH4 712 100% 0 0

Chromosomal Locations for CCDS 44603.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 57744134 57746148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57751065 57751188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2139 nt):
ATGTGCTCTCCTGCCAGTCCCAAAATCCTATACAGGAACCCCCGGTTCCTCAGGTTAGCTTTTCTGCAGC
TTCATCACCAGCAGCAGAGTGATGTGTTCTGTGATGTCCTTCTGCAGGCAGAAGGTGAGGCAGTTCCAGC
TCACTGCTGCATCCTGTCAGCTTGTAGCCCCTTCTTCACAGAGCGCCTGGAGCGGGAGAGGCCAGCTCAG
GGTGGGAAGGTGGTGCTAGAGCTGGGTGGCCTGAAGATCAGCACACTTAGGAAGCTGGTGGACTTCTTGT
ATACCTCAGAAATGGAAGTATCTCAAGAAGAAGCCCAGGATGTGCTATCTGCTGCCCGTCAGCTCCGTGT
GTCTGAGCTGGAATCCCTTCAGCTTGAGGGTGGAAAGTTGGTGAAGGCCCCACAGGGCCGAAGGCTGAAC
CGAGAGTGCTTACAACCAACAAGTGCTGCACCAATCTCTGCCAGAGTGGTGACACCCAGCCACCACCCTC
ACACCCCACTGCCCACTAATCAAACTCCTTGTCCTCTTGGGGCAATAAGATTGAAGTCCTTGGGGAAGGA
AGAGGGGCCCCAGGAAAACAACCGACAGAATGCAGACAATTTGTCTGGCACTCTTCTGCTCAAGAGGAAG
GCCAGAGCCTGCCCAACTCCACAAGAAAAAAACTCTTCACCATCAAGCCATAGTCAAGAGCCTAGAGAGA
ACAAGAATGACACTGCCCTTGATCCTACAGTGCTCTCCCCACCCAGCTTGTACCCCTCTGTGGACAAACA
CCTGTTGCCCAGAAAGATCAGGCTCAGTCGCTCAAAGCCATCTCCTGGTATCTGTACATCAAAGCCTTCC
AGCATTTTAAGTGGATCTAGCTCAGTGCCTGCAACCCCTGGCCGGCGTCTTTGGCGGCAGAGGAGTGTAA
ATAAAGAAACACCAGAGGACAAGCCAAAACCAGGCAGAGCTAGTCCTCTGCAGAGCACCCCAAACCCATC
TGGTCTGGGAAAGACAGGTGGGAGCAGGAAGCGGAGCCCTGAAGTCAGGGCACCTAACTCAGACTCTGCA
GAGGAGGGGCAGGTTGGGAGAGTTAAACTTAGGAAGATTGTCAATGGGACTTGCTGGGAAGTGGTACAAG
AGACTCCTCTCAAAAACACTCAAGATAGCCCCCAGATCCCAGATCCCGGAGGAGACTTCCAAGAGCCTTC
AGGAACTCAGCCATTCTCCAGTAATGAGCAGGAAATGTCACCTACTAGAACAGAACTGTGTCAGGACTCC
CCCATGTGCACTAAGCTACAAGACATTCTGGTCTCTGCTAGCCACTCCCCAGACCACCCAGTGGTGAAGT
CAGAGTTTGAGTCCAGTCCAGAACTGGTAGAGAAGGAACCTATGTTGGCTATTGACTGCAGAGAACCCTA
TGCATTTGACACAGCTCTGCTGGAGCAGCCCTGTGAGGCTGAGGAGTACCGAATCACAAGTGCTGCTGCC
ACCAGTGAGCTGGAGGAGATCCTGGACTTCATGCTCTGTGGCTCAGACATTGAACCACCTATAGGGTCTC
TGGAGAGTCCAGGGGCTGAGGGCTGCAGAACGCCTACCTACCATCTGACAGAAACAGGAAAGAACTGGAT
TGAAGGGGAAGAATGGTGTCTACCAGACATGGAACTCTGGCCCAGGGAGCTCACAGAATTGGAAAAGGAA
CCTGCTGGTGAGAACAGAGGGCCAACTGAGCTCCTTAGCCCCCTTGTCATGCCCTCTGAGGTGAGTGAAG
TGCTTTCAGTAGGAGGCCGTTGGACACCAGACCTTGAAATTACCAGCTCCCAGCCACTGGATGGTCAGGA
AGACAAACTTCTCCATGTCAGCTCCCTTGATACTCCCCAGAGGTCTTATGGGGACCTCTCACCTCCCTGC
TCAAACTGGGTGGAGACTGGGCTGGAAGTCTCCTTGACTACAGATGAGTTATTATACCCTTCTCCCAAGG
CAGGCAAGGAGGTATCTGGTCACTCTGAACTACTAGGCTCACTTCCTGCCAGCTCTGAAGAGGAAGAGAT
TGATGTGGTGGACTGGACAGCAGAGGGGAGGCTGGTACCCACTACTGTTCCCTCCGTGTGGCCTGACCCT
TCCTCAGAGTCAGAAACAGAGGTAGATATACTAACATAG

Translation (712 aa):
MCSPASPKILYRNPRFLRLAFLQLHHQQQSDVFCDVLLQAEGEAVPAHCCILSACSPFFTERLERERPAQ
GGKVVLELGGLKISTLRKLVDFLYTSEMEVSQEEAQDVLSAARQLRVSELESLQLEGGKLVKAPQGRRLN
RECLQPTSAAPISARVVTPSHHPHTPLPTNQTPCPLGAIRLKSLGKEEGPQENNRQNADNLSGTLLLKRK
ARACPTPQEKNSSPSSHSQEPRENKNDTALDPTVLSPPSLYPSVDKHLLPRKIRLSRSKPSPGICTSKPS
SILSGSSSVPATPGRRLWRQRSVNKETPEDKPKPGRASPLQSTPNPSGLGKTGGSRKRSPEVRAPNSDSA
EEGQVGRVKLRKIVNGTCWEVVQETPLKNTQDSPQIPDPGGDFQEPSGTQPFSSNEQEMSPTRTELCQDS
PMCTKLQDILVSASHSPDHPVVKSEFESSPELVEKEPMLAIDCREPYAFDTALLEQPCEAEEYRITSAAA
TSELEEILDFMLCGSDIEPPIGSLESPGAEGCRTPTYHLTETGKNWIEGEEWCLPDMELWPRELTELEKE
PAGENRGPTELLSPLVMPSEVSEVLSVGGRWTPDLEITSSQPLDGQEDKLLHVSSLDTPQRSYGDLSPPC
SNWVETGLEVSLTTDELLYPSPKAGKEVSGHSELLGSLPASSEEEEIDVVDWTAEGRLVPTTVPSVWPDP
SSESETEVDILT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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