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Report for CCDS40441.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40441.1 Public Mus musculus 8 Ccl22 23 108 98 CCDS HistoryNCBI Gene:20299Re-query CCDS DB by CCDS ID:40441.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40441.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034231.3 ENSMUSP00000034231.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034231.3Link to Ensembl Protein Viewer:ENSMUSP00000034231.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000034231Re-query CCDS DB by Protein ID:ENSMUSP00000034231
Original member Current member NCBI NM_009137.2 NP_033163.1 Accepted alive Link to Nucleotide Sequence:NM_009137.2Link to Protein Sequence:NP_033163.1Re-query CCDS DB by Nucleotide ID:NM_009137Re-query CCDS DB by Protein ID:NP_033163Link to BLAST:NP_033163.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033163.1 92 O88430 92 100% 0 0

Chromosomal Locations for CCDS 40441.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 94745714 94745786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94746902 94747025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94749805 94749886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (279 nt):
ATGGCTACCCTGCGTGTCCCACTCCTGGTGGCTCTCGTCCTTCTTGCTGTGGCAATTCAGACCTCTGATG
CA
GGTCCCTATGGTGCCAATGTGGAAGACAGTATCTGCTGCCAGGACTACATCCGTCACCCTCTGCCATC
A
CGTTTAGTGAAGGAGTTCTTCTGGACCTCAAAATCCTGCCGCAAGCCTGGCGTTGTTTTGATAACCGTC
AAG
AACCGAGATATCTGTGCCGATCCCAGGCAGGTCTGGGTGAAGAAGCTACTCCATAAACTGTCCTAG


Translation (92 aa):
MATLRVPLLVALVLLAVAIQTSDAGPYGANVEDSICCQDYIRHPLPSRLVKEFFWTSKSCRKPGVVLITV
K
NRDICADPRQVWVKKLLHKLS




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser