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Report for CCDS45139.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45139.1 Public Homo sapiens 14 JDP2 24 110 108 CCDS HistoryNCBI Gene:122953Re-query CCDS DB by CCDS ID:45139.1Re-query CCDS DB by GeneID:122953See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45139.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000267569.5 ENSP00000267569.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000267569.5Link to Ensembl Protein Viewer:ENSP00000267569.5Re-query CCDS DB by Nucleotide ID:ENST00000267569Re-query CCDS DB by Protein ID:ENSP00000267569
Original member Current member NCBI NM_001135049.1 NP_001128521.1 Accepted alive Link to Nucleotide Sequence:NM_001135049.1Link to Protein Sequence:NP_001128521.1Re-query CCDS DB by Nucleotide ID:NM_001135049Re-query CCDS DB by Protein ID:NP_001128521Link to BLAST:NP_001128521.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128521.1 174 Q8WYK2-2 174 100% 0 0

Chromosomal Locations for CCDS 45139.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 75432327 75432336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 75437898 75438121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 75461426 75461530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 75469290 75469475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (525 nt):
ATGGTAGCAGGCTGGCCTGCCACTCCTCCTGCTATGATGCCTGGGCAGATCCCGGACCCTTCGGTGACCA
CAGGCTCCCTGCCAGGGCTTGGCCCCCTGACCGGGCTCCCCAGCTCGGCCCTGACTGTGGAGGAGCTGAA
ATACGCTGACATCCGCAACCTCGGGGCCATGATTGCACCCTTGCACTTCCTGGAGGTGAAACTGGGCAAG
AGGCCCCAGCCCGTGAAAAGTGAGCTAGATGAGGAAGAGGAGCGAAGGAAAAGGCGCCGGGAGAAGAACA
AAGTCGCAGCAGCCCGATGCCGGAACAAGAAGAAGGAGCGCACGGAGTTTCTGCAGCGGGAATCCGAGCG
GCTGGAACTCATGAACGCAGAGCTGAAGACCCAGATTGAGGAGCTGAAGCAGGAGCGGCAGCAGCTCATC
CTGATGCTGAACCGACACCGCCCCACCTGCATCGTCCGGACCGACAGTGTCAAGACCCCCGAGTCAGAAG
GCAACCCACTGCTCGAGCAGCTCGAGAAGAAGTGA

Translation (174 aa):
MVAGWPATPPAMMPGQIPDPSVTTGSLPGLGPLTGLPSSALTVEELKYADIRNLGAMIAPLHFLEVKLGK
RPQPVKSELDEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNAELKTQIEELKQERQQLI
LMLNRHRPTCIVRTDSVKTPESEGNPLLEQLEKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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