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Report for CCDS87196.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87196.1 Public Homo sapiens 4 MYL5 24 110 108 CCDS HistoryNCBI Gene:4636Re-query CCDS DB by CCDS ID:87196.1Re-query CCDS DB by GeneID:4636See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87196.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000505477.5 ENSP00000423118.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000505477.5Link to Ensembl Protein Viewer:ENSP00000423118.1Re-query CCDS DB by Nucleotide ID:ENST00000505477Re-query CCDS DB by Protein ID:ENSP00000423118
Original member Current member EBI ENST00000511290.5 ENSP00000425162.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000511290.5Link to Ensembl Protein Viewer:ENSP00000425162.1Re-query CCDS DB by Nucleotide ID:ENST00000511290Re-query CCDS DB by Protein ID:ENSP00000425162
Original member Current member EBI ENST00000506838.5 ENSP00000427153.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000506838.5Link to Ensembl Protein Viewer:ENSP00000427153.1Re-query CCDS DB by Nucleotide ID:ENST00000506838Re-query CCDS DB by Protein ID:ENSP00000427153
Original member Current member NCBI NM_001363650.2 NP_001350579.1 Accepted alive Link to Nucleotide Sequence:NM_001363650.2Link to Protein Sequence:NP_001350579.1Re-query CCDS DB by Nucleotide ID:NM_001363650Re-query CCDS DB by Protein ID:NP_001350579Link to BLAST:NP_001350579.1
Original member Current member NCBI NM_001395444.1 NP_001382373.1 Accepted alive Link to Nucleotide Sequence:NM_001395444.1Link to Protein Sequence:NP_001382373.1Re-query CCDS DB by Nucleotide ID:NM_001395444Re-query CCDS DB by Protein ID:NP_001382373Link to BLAST:NP_001382373.1
Original member Current member NCBI NM_001395445.1 NP_001382374.1 Accepted alive Link to Nucleotide Sequence:NM_001395445.1Link to Protein Sequence:NP_001382374.1Re-query CCDS DB by Nucleotide ID:NM_001395445Re-query CCDS DB by Protein ID:NP_001382374Link to BLAST:NP_001382374.1
Original member Current member NCBI NM_001395446.1 NP_001382375.1 Accepted alive Link to Nucleotide Sequence:NM_001395446.1Link to Protein Sequence:NP_001382375.1Re-query CCDS DB by Nucleotide ID:NM_001395446Re-query CCDS DB by Protein ID:NP_001382375Link to BLAST:NP_001382375.1
Original member Current member NCBI NM_001395447.1 NP_001382376.1 Accepted alive Link to Nucleotide Sequence:NM_001395447.1Link to Protein Sequence:NP_001382376.1Re-query CCDS DB by Nucleotide ID:NM_001395447Re-query CCDS DB by Protein ID:NP_001382376Link to BLAST:NP_001382376.1
Original member Current member NCBI NM_001395448.1 NP_001382377.1 Accepted alive Link to Nucleotide Sequence:NM_001395448.1Link to Protein Sequence:NP_001382377.1Re-query CCDS DB by Nucleotide ID:NM_001395448Re-query CCDS DB by Protein ID:NP_001382377Link to BLAST:NP_001382377.1
Original member Current member NCBI NM_001395449.1 NP_001382378.1 Accepted alive Link to Nucleotide Sequence:NM_001395449.1Link to Protein Sequence:NP_001382378.1Re-query CCDS DB by Nucleotide ID:NM_001395449Re-query CCDS DB by Protein ID:NP_001382378Link to BLAST:NP_001382378.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001350579.1 132 Q02045-2 132 100% 0 0
NP_001382373.1 132 Q02045-2 132 100% 0 0
NP_001382374.1 132 Q02045-2 132 100% 0 0
NP_001382375.1 132 Q02045-2 132 100% 0 0
NP_001382376.1 132 Q02045-2 132 100% 0 0
NP_001382377.1 132 Q02045-2 132 100% 0 0
NP_001382378.1 132 Q02045-2 132 100% 0 0

Chromosomal Locations for CCDS 87196.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 678970 679033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 679914 680018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 680509 680587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 681092 681140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 681893 681994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (399 nt):
ATGGATCAGAACCGAGATGGCTTCATTGACAAGGAGGACCTGAAGGACACCTATGCCTCCCTGGGCAAGA
CCAACGTCAAGGACGACGAGCTGGACGCCATGCTCAAAGAGGCCTCGGGGCCCATCAACTTCACCATGTT
TCTGAACCTGTTTGGGGAGAAGCTGAGCGGTACCGACGCCGAGGAGACCATTCTTAACGCCTTCAAGATG
CTGGACCCGGACGGGAAAGGGAAAATCAACAAGGAGTACATCAAGCGTCTGCTGATGTCCCAGGCTGACA
AGATGACGGCGGAAGAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTA
CAAGGCGCTCAGCTACGTGATCACCCACGGGGAGGAGAAGGAGGAGTGA

Translation (132 aa):
MDQNRDGFIDKEDLKDTYASLGKTNVKDDELDAMLKEASGPINFTMFLNLFGEKLSGTDAEETILNAFKM
LDPDGKGKINKEYIKRLLMSQADKMTAEEVDQMFQFASIDVAGNLDYKALSYVITHGEEKEE


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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