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Report for CCDS34454.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34454.1 Public Homo sapiens 6 MRPL2 24 110 108 CCDS HistoryNCBI Gene:51069Re-query CCDS DB by CCDS ID:34454.1Re-query CCDS DB by GeneID:51069See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34454.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000388752.8 ENSP00000373404.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000388752.8Link to Ensembl Protein Viewer:ENSP00000373404.3Re-query CCDS DB by Nucleotide ID:ENST00000388752Re-query CCDS DB by Protein ID:ENSP00000373404
Original member Current member NCBI NM_015950.5 NP_057034.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015950.5Link to Protein Sequence:NP_057034.2Re-query CCDS DB by Nucleotide ID:NM_015950Re-query CCDS DB by Protein ID:NP_057034Link to BLAST:NP_057034.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057034.2 305 Q5T653 305 100% 0 0

Chromosomal Locations for CCDS 34454.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 43054274 43054486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43055545 43055618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43055897 43056007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43056081 43056196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43056307 43056445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43058065 43058233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43059286 43059381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (918 nt):
ATGGCCCTGTGCGCACTGACCCGCGCTCTGCGCTCTCTGAACCTGGCGCCCCCGACCGTCGCCGCCCCTG
CCCCGAGTCTGTTCCCCGCCGCCCAGATGATGAACAATGGCCTCCTCCAACAGCCCTCTGCCTTGATGTT
GCTCCCCTGCCGCCCAGTTCTTACTTCTGTGGCCCTTAATGCCAACTTTGTGTCCTGGAAGAGTCGTACC
AAGTACACCATTACACCAGTGAAGATGAGGAAGTCTGGGGGCCGAGACCACACAGGCCGAATCCGGGTGC
ATGGTATTGGCGGGGGCCACAAGCAACGTTATCGAATGATTGACTTTCTGCGTTTCCGGCCTGAGGAGAC
CAAGTCAGGACCCTTTGAGGAGAAGGTTATCCAAGTCCGCTATGATCCCTGTAGGTCAGCAGACATAGCT
CTGGTTGCTGGGGGCAGCCGGAAACGCTGGATCATCGCCACAGAAAACATGCAGGCTGGAGATACAATCT
TGAACTCTAACCACATAGGCCGAATGGCAGTTGCTGCTCGGGAAGGGGATGCGCATCCTCTTGGGGCTCT
GCCTGTGGGGACCCTCATCAACAACGTGGAAAGTGAGCCAGGCCGGGGTGCCCAATATATCCGAGCTGCA
GGGACGTGTGGTGTGCTACTGCGGAAGGTGAATGGCACAGCCATTATCCAGCTGCCCTCTAAGAGGCAGA
TGCAGGTGCTGGAAACGTGCGTAGCAACAGTAGGCCGAGTATCCAACGTTGATCATAACAAACGGGTCAT
TGGCAAGGCAGGTCGCAACCGCTGGCTGGGCAAGAGGCCTAACAGTGGGCGGTGGCACCGCAAGGGGGGC
TGGGCTGGCCGAAAGATTCGGCCACTACCCCCCATGAAGAGTTACGTGAAGCTGCCTTCTGCTTCTGCCC
AAAGCTGA

Translation (305 aa):
MALCALTRALRSLNLAPPTVAAPAPSLFPAAQMMNNGLLQQPSALMLLPCRPVLTSVALNANFVSWKSRT
KYTITPVKMRKSGGRDHTGRIRVHGIGGGHKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIA
LVAGGSRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAA
GTCGVLLRKVNGTAIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGRNRWLGKRPNSGRWHRKGG
WAGRKIRPLPPMKSYVKLPSASAQS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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