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Report for CCDS17040.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17040.1 Public Mus musculus 2 Wfdc2 23 108 98 CCDS HistoryNCBI Gene:67701Re-query CCDS DB by CCDS ID:17040.1Re-query CCDS DB by GeneID:67701See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17040.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000017867.9 ENSMUSP00000017867.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000017867.9Link to Ensembl Protein Viewer:ENSMUSP00000017867.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000017867Re-query CCDS DB by Protein ID:ENSMUSP00000017867
Original member Current member NCBI NM_026323.2 NP_080599.1 Accepted alive Link to Nucleotide Sequence:NM_026323.2Link to Protein Sequence:NP_080599.1Re-query CCDS DB by Nucleotide ID:NM_026323Re-query CCDS DB by Protein ID:NP_080599Link to BLAST:NP_080599.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080599.1 174 Q9DAU7 174 100% 0 0

Chromosomal Locations for CCDS 17040.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 164562726 164562804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164563308 164563451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164564057 164564212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164565792 164565937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (525 nt):
ATGCCTGCCTGTCGCCTCTGCTTGCTGGCCGCTGGCCTCCTACTAGGGTTGCTACTGTTCACCCCCATCT
CAGCCACAGGCACCGATGCAGAGAAACCCGGCGAGTGCCCCCAGCTTGAACCAATTACGGACTGTGTGTT
GGAGTGCACTTTGGACAAGGACTGTGCGGACAACCGCAAGTGCTGCCAGGCGGGCTGCAGCTCTGTCTGC
TCCAAGCCTAATGGACCGAGCGAAGGAGAGCTCTCAGGGACAGATACTAAACTCTCAGAGACTGGGACTA
CTACTCAATCAGCGGGCCTTGACCACACTACTAAACCACCGGGAGGTCAAGTCTCCACGAAGCCACCAGC
TGTGACCAGGGAAGGCTTAGGTGTCCGAGAAAAGCAGGGCACCTGCCCCAGCGTGGACATACCCAAGCTC
GGCCTCTGTGAGGACCAGTGTCAGGTGGACAGCCAGTGTTCTGGCAACATGAAATGCTGCCGCAATGGAT
GTGGGAAGATGGCCTGCACCACACCCAAATTCTGA

Translation (174 aa):
MPACRLCLLAAGLLLGLLLFTPISATGTDAEKPGECPQLEPITDCVLECTLDKDCADNRKCCQAGCSSVC
SKPNGPSEGELSGTDTKLSETGTTTQSAGLDHTTKPPGGQVSTKPPAVTREGLGVREKQGTCPSVDIPKL
GLCEDQCQVDSQCSGNMKCCRNGCGKMACTTPKF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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