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Report for CCDS47749.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47749.2 Public Homo sapiens 7 ASB10 24 110 108 CCDS HistoryNCBI Gene:136371Re-query CCDS DB by CCDS ID:47749.2Re-query CCDS DB by GeneID:136371See the combined annotation on chromosome 7 in Sequence Viewer

Public Note for CCDS 47749.1
The coding region has been updated to shorten the N-terminus to one that is more supported by the available transcript and conservation data.

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 47749.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000275838.5 ENSP00000275838.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000275838.5Link to Ensembl Protein Viewer:ENSP00000275838.1Re-query CCDS DB by Nucleotide ID:ENST00000275838Re-query CCDS DB by Protein ID:ENSP00000275838
Original member Current member NCBI NM_001142460.1 NP_001135932.2 Accepted alive Link to Nucleotide Sequence:NM_001142460.1Link to Protein Sequence:NP_001135932.2Re-query CCDS DB by Nucleotide ID:NM_001142460Re-query CCDS DB by Protein ID:NP_001135932Link to BLAST:NP_001135932.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001135932.2 429 Q8WXI3-2 429 100% 0 0

Chromosomal Locations for CCDS 47749.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 151176112 151176297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 151180939 151181458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 151186392 151186659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 151186815 151187130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1290 nt):
ATGCTCATGAGTTGGTCTCCAGAAGAGTGCAAGGGGCAGGGAGAGCCCCTCGATGACAGACACCCCCTCT
GTGCCAGGCTGGTGGAGAAGCCCAGCAGAGGGTCTGAGGAGCACCTCAAGTCTGGCCCGGGACCCATCGT
CACCCGCACAGCCTCAGGACCTGCCCTTGCCTTCTGGCAGGCAGTGCTGGCTGGGGACGTGGGCTGTGTC
TCCCGCATCCTCGCGGACTCCAGTACTGGCCTGGCTCCTGATTCCGTCTTTGATACCAGCGACCCAGAGC
GATGGAGGGATTTCCGCTTCAACATCCGTGCTCTGAGACTCTGGTCTCTGACATACGAAGAGGAGCTGAC
CACCCCACTGCATGTGGCAGCCAGCCGTGGCCACACGGAAGTCCTGCGGCTGCTGCTGAGGCGGCGAGCA
AGGCCAGACAGTGCCCCTGGGGGCCGCACCGCCCTGCACGAGGCCTGTGCTGCAGGCCACACTGCCTGTG
TTCATGTGCTGCTGGTGGCAGGAGCCGACCCCAACATCGCTGACCAGGATGGGAAACGCCCCCTGCATCT
CTGCCGGGGGCCTGGCACCCTTGAGTGTGCGGAGCTGCTCCTCAGGTTTGGAGCGAGAGTGGATGGTCGG
TCCGAGGAAGAAGAGGAGACCCCTTTGCATGTGGCCGCCCGGCTTGGCCATGTGGAGCTGGCAGATCTGC
TTCTAAGACGGGGGGCATGTCCTGATGCCCGCAATGCCGAAGGCTGGACCCCACTGCTGGCTGCCTGTGA
CGTCCGCTGCCAGTCCATCACCGATGCCGAGGCCACCACCGCCCGCTGCCTGCAGCTGTGCAGCTTGCTG
CTTTCAGCTGGAGCAGACGCTGATGCTGCGGACCAGGACAAGCAGCGACCCCTGCACCTGGCCTGCCGCC
GTGGCCATGCAGCTGTCGTGGAGCTGCTCCTGTCCTGTGGTGTCAGCGCCAACACCATGGACTATGGGGG
ACACACGCCCCTGCACTGTGCTCTGCAGGGCCCAGCTGCAGCCCTGGCCCAGAGCCCCGAGCACGTGGTT
CGGGCTCTGCTCAACCATGGCGCCGTCCGTGTCTGGCCAGGGGCCCTCCCCAAGAAACATCAGCGTTTCT
ACTCCTCCCTCTTCGCCTTGGTGAGGCAGCCCAGGTCGCTGCAGCATTTGAGCCGCTGTGCGCTCCGCTC
CCACCTGGAGGGCAGCCTGCCCCAAGCGCTGCCCCGCCTCCCCCTGCCACCGCGCCTGCTCCGCTACCTG
CAGCTGGATTTTGAGGGCGTGCTCTACTAG

Translation (429 aa):
MLMSWSPEECKGQGEPLDDRHPLCARLVEKPSRGSEEHLKSGPGPIVTRTASGPALAFWQAVLAGDVGCV
SRILADSSTGLAPDSVFDTSDPERWRDFRFNIRALRLWSLTYEEELTTPLHVAASRGHTEVLRLLLRRRA
RPDSAPGGRTALHEACAAGHTACVHVLLVAGADPNIADQDGKRPLHLCRGPGTLECAELLLRFGARVDGR
SEEEEETPLHVAARLGHVELADLLLRRGACPDARNAEGWTPLLAACDVRCQSITDAEATTARCLQLCSLL
LSAGADADAADQDKQRPLHLACRRGHAAVVELLLSCGVSANTMDYGGHTPLHCALQGPAAALAQSPEHVV
RALLNHGAVRVWPGALPKKHQRFYSSLFALVRQPRSLQHLSRCALRSHLEGSLPQALPRLPLPPRLLRYL
QLDFEGVLY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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