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Report for CCDS4105.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
4105.1 |
Public |
Homo sapiens |
5 |
NREP |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:9315](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:4105.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:9315](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 5 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 4105.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000257435.12 |
ENSP00000257435.7 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000257435.12](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000257435.7](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000257435](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000257435](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000379671.7 |
ENSP00000368993.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000379671.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000368993.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000379671](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000368993](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000455559.6 |
ENSP00000392559.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000455559.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000392559.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000455559](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000392559](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000419114.6 |
ENSP00000399766.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000419114.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000399766.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000419114](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000399766](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000446294.6 |
ENSP00000402965.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000446294.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000402965.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000446294](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000402965](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000453526.6 |
ENSP00000403383.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000453526.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000403383.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000453526](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000403383](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000447165.6 |
ENSP00000408839.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000447165.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000408839.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000447165](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000408839](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000450761.6 |
ENSP00000416617.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000450761.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000416617.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000450761](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000416617](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000509427.5 |
ENSP00000422630.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000509427.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000422630.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000509427](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000422630](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000508870.5 |
ENSP00000427149.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000508870.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000427149.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000508870](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000427149](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001142476.1 |
NP_001135948.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001142476.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001135948.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001142476](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001135948](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001135948.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001142477.1 |
NP_001135949.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001142477.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001135949.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001142477](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001135949](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001135949.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001142478.2 |
NP_001135950.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001142478.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001135950.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001142478](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001135950](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001135950.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001142479.1 |
NP_001135951.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001142479.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001135951.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001142479](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001135951](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001135951.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001142480.1 |
NP_001135952.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001142480.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001135952.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001142480](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001135952](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001135952.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001142481.1 |
NP_001135953.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001142481.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001135953.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001142481](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001135953](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001135953.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001142482.1 |
NP_001135954.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001142482.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001135954.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001142482](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001135954](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001135954.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001142483.1 |
NP_001135955.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001142483.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001135955.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001142483](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001135955](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001135955.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_004772.4 |
NP_004763.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_004772.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_004763.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_004772](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_004763](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_004763.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 4105.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (207 nt): ATGGTTTATTACCCAGAACTCTTTGTCTGGGTCAGTCAAGAACCATTTCCAAACAAGGACATGGAGGGAA GGCTTCCTAAGGGAAGACTTCCTGTCCCAAAGGAAGTGAACCGCAAGAAGAACGATGAGACAAACGCTGC CTCCCTGACTCCACTGGGCAGCAGTGAACTCCGCTCCCCAAGAATCAGTTACCTCCACTTTTTTTAA
Translation (68 aa): MVYYPELFVWVSQEPFPNKDMEGRLPKGRLPVPKEVNRKKNDETNAASLTPLGSSELRSPRISYLHFF
|