NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS36235.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36235.1 Public Mus musculus 11 Taok1 23 108 98 CCDS HistoryNCBI Gene:216965Re-query CCDS DB by CCDS ID:36235.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36235.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000017435.10 ENSMUSP00000017435.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000017435.10Link to Ensembl Protein Viewer:ENSMUSP00000017435.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000017435Re-query CCDS DB by Protein ID:ENSMUSP00000017435
Original member Current member EBI ENSMUST00000058496.7 ENSMUSP00000055470.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000058496.7Link to Ensembl Protein Viewer:ENSMUSP00000055470.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000058496Re-query CCDS DB by Protein ID:ENSMUSP00000055470
Original member Current member NCBI NM_001364133.1 NP_001351062.1 Accepted alive Link to Nucleotide Sequence:NM_001364133.1Link to Protein Sequence:NP_001351062.1Re-query CCDS DB by Nucleotide ID:NM_001364133Re-query CCDS DB by Protein ID:NP_001351062Link to BLAST:NP_001351062.1
Original member Current member NCBI NM_001364134.1 NP_001351063.1 Accepted alive Link to Nucleotide Sequence:NM_001364134.1Link to Protein Sequence:NP_001351063.1Re-query CCDS DB by Nucleotide ID:NM_001364134Re-query CCDS DB by Protein ID:NP_001351063Link to BLAST:NP_001351063.1
Original member Current member NCBI NM_144825.3 NP_659074.2 Accepted alive Link to Nucleotide Sequence:NM_144825.3Link to Protein Sequence:NP_659074.2Re-query CCDS DB by Nucleotide ID:NM_144825Re-query CCDS DB by Protein ID:NP_659074Link to BLAST:NP_659074.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001351062.1 1001 Q5F2E8 1001 100% 0 0
NP_001351063.1 1001 Q5F2E8 1001 100% 0 0
NP_659074.2 1001 Q5F2E8 1001 100% 0 0

Chromosomal Locations for CCDS 36235.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 77537867 77538328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77540054 77540236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77541625 77541837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77545289 77545528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77549272 77549475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77550872 77551000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77553673 77553909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77555564 77555698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77559742 77559945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77560254 77560421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77563664 77563745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77565746 77565839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77571607 77571698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77573696 77573809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77575573 77575669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77577323 77577368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77578726 77578827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77579774 77579845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 77585273 77585404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3006 nt):
ATGCCATCAACTAACAGAGCAGGCAGTCTAAAGGACCCTGAAATTGCAGAGCTCTTCTTCAAAGAAGATC
CG
GAAAAGCTCTTCACAGATCTCAGAGAAATCGGCCATGGGAGCTTTGGAGCAGTATATTTTGCACGAGA
T
GTGCGTACTAATGAAGTGGTGGCCATCAAGAAAATGTCTTATAGTGGAAAGCAGTCTACTGAGAAATGG
CAG
GATATTATTAAGGAAGTCAAGTTTCTACAAAGAATAAAACATCCCAACAGTATAGAATACAAAGGCT
GC
TATTTACGTGAACACACAGCATGGCTTGTAATGGAATATTGTTTAGGATCTGCTTCAGATTTATTAGA
A
GTTCATAAAAAGCCATTACAAGAAGTGGAAATAGCAGCAATTACACATGGTGCTCTCCAGGGACTAGCT
TAT
TTACATTCTCATACCATGATCCATAGAGATATCAAAGCAGGAAATATCCTTCTGACAGAACCAGGCC
AA
GTGAAACTTGCTGACTTTGGATCTGCTTCCATGGCTTCCCCTGCCAATTCTTTTGTGGGAACACCATA
T
TGGATGGCCCCAGAAGTAATTTTAGCCATGGATGAAGGACAGTATGATGGCAAAGTTGATGTATGGTCT
CTT
GGAATAACGTGTATTGAATTAGCCGAGAGGAAGCCTCCTTTATTTAATATGAATGCAATGAGTGCCT
TA
TATCACATAGCCCAAAATGAATCCCCTACACTACAATCTAATGAATGGTCTGATTATTTTCGAAACTT
T
GTAGATTCTTGCCTCCAGAAAATCCCTCAAGATCGCCCTACATCAGAGGAACTTTTAAAGCACATGTTT
GTT
CTTCGAGAGCGCCCTGAAACAGTGTTAATAGATCTTATTCAAAGGACAAAGGATGCAGTAAGAGAGC
TG
GACAATCTGCAGTATCGAAAGATGAAGAAACTCCTTTTCCAGGAGGCACATAATGGGCCAGCGGTAGA
A
GCACAGGAAGAAGAGGAGGAGCAAGATCATGGTGTTGGCCGAACAGGAACAGTGAATAGTGTTGGAAGC
AAT
CAGTCTATCCCTAGTATGTCTATCAGTGCCAGCAGTCAAAGCAGCAGTGTTAATAGTCTTCCAGATG
CA
TCAGATGACAAGAGTGAGCTAGACATGATGGAGGGAGACCATACAGTGATGTCTAACAGTTCTGTCAT
C
CACTTAAAACCTGAGGAGGAAAATTACCAGGAAGAAGGAGATCCTAGAACAAGAGCATCAGACCCACAG
TCT
CCCCCTCAGGTGTCTCGTCACAAGTCACATTATCGTAATAGAGAACACTTTGCAACCATACGAACAG
CA
TCACTGGTTACAAGACAGATGCAAGAACATGAGCAGGACTCTGAACTTAGAGAACAGATGTCTGGTTA
T
AAGCGGATGAGGCGACAGCATCAAAAGCAGCTGATGACGCTGGAAAATAAACTGAAGGCAGAGATGGAC
GAA
CATCGGCTCAGATTAGACAAAGATCTTGAAACTCAGCGTAACAATTTCGCTGCAGAAATGGAGAAAC
TT
ATTAAGAAACACCAAGCTGCTATGGAAAAAGAGGCTAAAGTGATGGCCAATGAGGAGAAAAAATTCCA
G
CAACACATTCAGGCTCAACAGAAAAAAGAACTGAATAGCTTTTTGGAGTCTCAAAAAAGAGAATATAAA
CTT
CGCAAAGAGCAGCTTAAGGAGGAGCTGAATGAAAACCAGAGCACACCTAAAAAAGAAAAGCAGGAAT
GG
CTTTCAAAGCAGAAGGAGAATATACAGCATTTTCAGGCAGAAGAAGAAGCTAATCTTCTTCGACGTCA
A
AGGCAGTATCTAGAGCTAGAATGTCGTCGCTTCAAAAGAAGAATGTTACTTGGGCGACATAACTTGGAA
CAG
GACCTTGTCAGGGAGGAGTTAAACAAAAGGCAGACTCAAAAGGACTTGGAACATGCAATGCTATTGC
GA
CAGCATGAATCAATGCAAGAACTGGAGTTTCGCCATCTCAACACTATTCAGAAGATGCGCTGTGAGTT
G
ATCAGACTGCAGCATCAAACTGAGCTCACTAACCAGCTAGAGTACAATAAGAGAAGGGAACGGGAACTG
AGG
CGAAAACATGTCATGGAAGTTCGACAACAACCTAAGAGTCTGAAGTCTAAAGAACTCCAAATAAAAA
AG
CAGTTTCAGGATACCTGCAAAATTCAAACCAGACAGTACAAAGCATTAAGGAATCACCTACTGGAGAC
T
ACACCAAAGAGTGAGCACAAAGCTGTTTTGAAAAGACTCAAGGAGGAACAGACTCGAAAGTTAGCCATC
TTG
GCTGAGCAGTATGATCATAGCATTAATGAAATGCTCTCCACACAAGCTCTGCGTTTGGATGAAGCAC
AG
GAAGCAGAATGCCAGGTTCTGAAGATGCAGCTGCAGCAGGAACTGGAGCTGCTGAATGCTTATCAGAG
C
AAAATAAAGATGCAAGCTGAGGCCCAACATGATCGAGAGCTTCGAGAGCTGGAACAGAGGGTCTCCCTT
CGC
AGAGCGCTCTTAGAACAAAAGATTGAAGAAGAGATGTTGGCTTTGCAGAATGAACGCACAGAACGAA
TA
CGTAGCCTGCTCGAGCGTCAAGCCAGAGAAATTGAAGCATTTGACTCTGAAAGCATGAGATTAGGTTT
T
AGTAACATGGTCCTTTCTAATCTCTCCCCTGAGGCATTCAGCCACAGCTACCCAGGAGCTTCTAGTTGG
TCT
CACAATCCTACTGGGGGTCCAGGACCTCACTGGGGTCATCCCATGGGTGGCACACCACAAGCTTGGG
GT
CATCCGATGCAAGGTGGACCCCAACCATGGGGTCATCCCTCAGGGCCAATGCAAGGGGTACCTCGAGG
T
AGCAGTATGGGAGTCCGCAATAGCCCCCAGGCTTTGAGGCGGACAGCTTCTGGGGGACGGACGGAACAG
GGC
ATGAGCAGAAGCACGAGTGTCACTTCACAAATATCCAATGGGTCACACATGTCTTACACATAA


Translation (1001 aa):
MPSTNRAGSLKDPEIAELFFKEDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSTEKW
Q
DIIKEVKFLQRIKHPNSIEYKGCYLREHTAW
LVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLA
Y
LHSHTMIH
RDIKAGNILLTEPGQVKLADFGSASMASPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWS
L
GITCIEL
AERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMF
V
LRERPETVLIDLIQRTKDAVRELDNLQYRKMKKLLFQEAHNGPAVEAQEEEE
EQDHGVGRTGTVNSVGS
N
QSIPSMSISASSQSSSVNSLPDASDDKSELDMMEGDHTVMSNSSVIHLKP
EEENYQEEGDPRTRASDPQ
S
PPQVSRHKSHYRNREHFATIRTASL
VTRQMQEHEQDSELREQMSGYKRMRRQHQKQLMTLENKLKAEMD
E
HRLRLDKDLETQRNNFAAEMEKLIKKHQAAMEKE
AKVMANEEKKFQQHIQAQQKKELNSFLESQKREYK
L
RKEQLKE
ELNENQSTPKKEKQEWLSKQKENIQHFQAEEEANLLRRQRQYLELECRRFKRRMLLGRHNLE
Q
DLVRE
ELNKRQTQKDLEHAMLLRQHESMQELEFRHLNTIQKMRCELIRLQHQTELTNQLEYNKRREREL
R
RKHVMEVRQQPKSLK
SKELQIKKQFQDTCKIQTRQYKALRNHLLETTPKSEHKAVLKRLKEEQTRKLAI
L
AEQYDHSINEMLSTQA
LRLDEAQEAECQVLKMQLQQELELLNAYQSKIKMQAEAQHDRELRELEQRVSL
R
RALLEQK
IEEEMLALQNERTERIRSLLERQAREIEAFDSESMRLGFSNMVLSNLSPEAFSHSYPGASSW
S
HNPTGGPGPHWGHPMGGTPQAWGHPMQGGPQPWGHPSGPMQGVPRGSSMGVRNSPQALRRTASGGRTEQ
G
MSRSTSVTSQISNGSHMSYT




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser