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Report for CCDS36259.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36259.1 Public Mus musculus 11 Heatr6 23 108 98 CCDS HistoryNCBI Gene:217026Re-query CCDS DB by CCDS ID:36259.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36259.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000001002.7 ENSMUSP00000001002.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000001002.7Link to Ensembl Protein Viewer:ENSMUSP00000001002.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000001002Re-query CCDS DB by Protein ID:ENSMUSP00000001002
Original member Current member NCBI NM_145432.3 NP_663407.2 Accepted alive Link to Nucleotide Sequence:NM_145432.3Link to Protein Sequence:NP_663407.2Re-query CCDS DB by Nucleotide ID:NM_145432Re-query CCDS DB by Protein ID:NP_663407Link to BLAST:NP_663407.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663407.2 1184 Q6P1G0 1184 100% 0 0

Chromosomal Locations for CCDS 36259.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 83753723 83753941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83755710 83755817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83757310 83757450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83758289 83758404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83759304 83759418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83760899 83761000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83764886 83765023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83765853 83766160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83767078 83767255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83769056 83769262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83769668 83769767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83772245 83772600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83773870 83773992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83774422 83774508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83775701 83775835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83776614 83776736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83777238 83777362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83778845 83778941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83779401 83779605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83781151 83781722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3555 nt):
ATGGCGGCGGTGCAGGTCGCCGCCTCTCTTCCTTGTGGGCAGCCGCGAGAGGCCCCGCGGGAACTGTCGC
CGGAGCAGGACGATGGGTTCCGCCGCTTGTCTGCCAGGCTCCGCGCGCTGCAGCCGGATGACAGCACCGT
GTCCCGCATGGAGATTCACCTGCTCTTCGACCAGCTCATCTCCGAGAACTACAGCGAGGGCGGCGGCGTG
GCCCCCGAGGATGTCAGTGCTCTTCTTGTGCGAGCTTGTCAGCTGGTGCCTCTTAACCAGAATCACCTTG
TGAGCAAAGTGTGTCAACTGATCCATCGTTTGCTTAACAGATTACAGGTGGTTGTGGATGAGCCAAACTT
AGATTTCCTGTTGACCTACACGATCTCCGCTCTTCAACAGTGTAGCTCTTGGACACACATGGAAATTCTT
CAAGCCCTGGCAGCTCTGGTTTACTGCAATGGCTCAAAATGTCAAAAGCATCTCCCAGACTTGCTGGGCA
AGAGTGGCCTCTTGATGAAATTGAGTGATTTATCTCACTCTGACCCTGAAGTCAGGAGAGCTGCAGTACA
CTGTATGGCAAACTTATGTCTCAGTGTGCCAGGACAGCCATACTTGGAGGAGCCCTACCAGCATGTCTGC
TTCCAAGCTTTCTTGACCATTTTACAGTCTCCAAAATCGTCTGATATGGATGATATAACATTTTGCATGC
TGTTACAGAATGCACTGAAAGGCATACAGTCGCTTCTCAATGGTGGGAAGATGAGGCTGACGCAGACCGA
GCACCTGGGAGCGCTTCTCGCTGTGCTGAAGAAAGCCATGTTTCACGGACTCCCTGGATTAAACATAGAG
ATGCCCGCAGTGCTATACCCAACTCCACTTCCTCAGTATGATGGGCGATCTCCTGTTAAACCCCAGCAGC
CAGAATCCACTACTGCTCGATCATCTGCGAATAAAAAGAAAAAACACAAAGTAAAAACAAAGAAAACTCA
ACAAGGAGAGAAAGCGGAGGAGGAAGAGGAGGAGCCCTGTGGTGAAGTGGAAGCAGCACCAGGGCTCAGC
ATGGACCAGGCGAATGTGAGTGGCGAGAGCGCCTGGTGCTCCTCCCCGTGGGGCTCCCAGGGTTTGCCTG
TGGATGGAGGCAGAGCTGCCGGAAGAGAGCAGGCCTCCTTGCCCTTCGCCTCCTCCAGCTGGAAGAGAGT
CAGCAGCAGTGAGTCAGACTATTCGGATGCAGAAGGAGGCATGCAGGGTAAAATGAGGTCATACCAGGCC
AAGGTTCGCCAAGGGGCACTAGCTTGTTTTCTTTCTACTATCAAATCAATAGAAAAGAAAGTTCTATACG
GCTACTGGTCTGCCTTTGTTCCTGACACGCCGGAGCTCGGAAGCCCACAGTCAGTGTCCTTAATGACGCT
CACATTAAAGGACCCGTCTCCAAAGACCCGTGCCTGTGCTCTTCAAGTCCTGTCTGCCATCTTGGAAGGC
TCAAAGCAGTTCCTTTCTGTTGCTGAAGACACTAGTGACCACAAACGGGCTTTCACGCCCTTCTCAGTCA
CAATTGCATCCAGCATTAGAGAGTTGCACAGATGTCTTTTGTTAGCTTTGGTGGCAGAGTCCTCGTCCCA
GACCCTTACTCAGATAATTAAGTGCCTTGCAAACCTAGTATCAAACGCCCCCTACAACCGTCTGAAACTC
AGCTTGCTAACCAAAGTCTGGAACCACATAAAGCCTTACATCCGCCACAAAGATGTTAATGTCCGAGTGT
CAAGTCTCACGCTCCTAGGAGCTATAGTGTCCACTCACGCTCCTTTGCCGGAAGTCCAGCTGCTTCTTCA
ACAGCCCTGCTCCTCTGGACTCAGCAGCAGCAGCTCAGCAACCCCTCACCTCAGCACTCCTGATGGCTGG
AAGACATTCCCTGCAGGGTCCTCTCTGGAAGAAGCATCGCTCAGCTCACCAAAGGGGTCATCGGAGCCCT
GCTGGCTCATCCGACTCTGCATTTCCACTGTGGTGCTGCCCAAGGAGGACTCCTGCTCAGGTAGCGATGC
TGGCTCCGCCCTGGGAAGCACCTATGAACCATCCCCCATGCGGCTGGAGGCTCTACAGGTTTTGGCTCAC
CTGGCGAGGGGCTATTTTTCAACGGCTCAGTTGTACTTGATGGAGCTGGGCGAGGTGATCTGTAAGTGCA
TGTGTGAGGCAAACCCATCCATTCAGCTCCACGGCGTGAAGCTCCTGGAAGAACTGGGTGCAGGCTTGAT
ACAGCAGTACAAGCCAGATTCCAACATAGCGCCTGAACAGAGAGTGCCAGTCCACCTGGTGGTGGTGTTC
TGGACTGCGATGCTGAGTGGTCCTTTGCCCCGAGCCCTGCAGTCTGCAGAGCACCCGACTCTCCAGGCGA
GCGCCTGTGATGCCCTGTCCTCCATCTTGCCAGAGGCCTTCAGCAGTCTGCCGAACGACAAGCAGATTTT
GTGCATTACAGTGTTGCTCGGCCTGAATGACAGCAAGAACCATCTAGTGAAAGCCGCCACCTCCAGGGCC
CTTGGAGTCTACGTGCTTTTCCCGTGCCTCAGACAGGACGTCATATTTGTTGCAGACACAGCAAATGCTA
TATTGATGTCACTTCAAGATAAGTCACTAAACGTGCGCGCCAAAGCAGCCTGGTCCCTGGGCAACCTGAC
AGATACTCTGATTGTCAACATGGACACACCAGACCCAAGTTTCCAGGATGAGTTCTCTGGACTCCTGCTC
TTGAAAATGTTGCAGTGTGCAATACAAGCCTCCACAGACAAAGACAAGGTCAAAAGCAATGCGGTCCGGG
CCCTGGGGAACCTGCTTCATTTTCTCCAGCCCTCTCACGTAGAAAGGCCCAGGTTCGCTGAAATCATTGA
GGAGTCCATACAGGCTCTGATCTCCACTGTTGTAAACGAGGCCGCCATGAAAGTGCGATGGAATGCCTGT
TACGCGATGGGAAATGTTTTTAAAAACCCTGCTCTTCCACTTGGGACAGCTCCGTGGACCTCCCAGGCCT
ACAAAGCCCTGACATCAGTTGTGATGTCATGCAAAAACTTCAAAGTGCGCATCAGATCTGCCGCAGCCCT
CTCCGTTCCGAGCAAGAGAGGACAGTACGGGTCCCTAGAACAGTTCATCCAGATCTGGAGTGCGCTGGTC
ACTGCCCTGCAGAAGAGCGAAGACACCACAGACTTCCTGGAGTTCAAGTACTGTGCCAGCCTGCGGACTC
ACATCTGCCAGGCGCTGCTTCACCTCCTGAGCCTAGCCAGTGCCTCAGACCTGCCCGGCATTCAAGAAAC
TCTTAAGCTGCATGGGGATATGATTCGGTCCTACATCCTACAGTTCTTAAAATCAGGAGCAGAGGGAGAT
GACCCCGGAGCAGTCCACACCCCACAGGAAAGAGTCCAGATGGTCCGAGTGGCCCTGAAGCACATACACA
GAGTGCAGACACTGGCTGGAGACACAGCCAGAGGGGCCATCATGGGATTCTTAGAGGACATCCTGACCGT
TCACTGTGACTCCTCAGGAGAACAGGTGATGCTTCGTGGGCCCTCAGATCAGTGA

Translation (1184 aa):
MAAVQVAASLPCGQPREAPRELSPEQDDGFRRLSARLRALQPDDSTVSRMEIHLLFDQLISENYSEGGGV
APEDVSALLVRACQLVPLNQNHLVSKVCQLIHRLLNRLQVVVDEPNLDFLLTYTISALQQCSSWTHMEIL
QALAALVYCNGSKCQKHLPDLLGKSGLLMKLSDLSHSDPEVRRAAVHCMANLCLSVPGQPYLEEPYQHVC
FQAFLTILQSPKSSDMDDITFCMLLQNALKGIQSLLNGGKMRLTQTEHLGALLAVLKKAMFHGLPGLNIE
MPAVLYPTPLPQYDGRSPVKPQQPESTTARSSANKKKKHKVKTKKTQQGEKAEEEEEEPCGEVEAAPGLS
MDQANVSGESAWCSSPWGSQGLPVDGGRAAGREQASLPFASSSWKRVSSSESDYSDAEGGMQGKMRSYQA
KVRQGALACFLSTIKSIEKKVLYGYWSAFVPDTPELGSPQSVSLMTLTLKDPSPKTRACALQVLSAILEG
SKQFLSVAEDTSDHKRAFTPFSVTIASSIRELHRCLLLALVAESSSQTLTQIIKCLANLVSNAPYNRLKL
SLLTKVWNHIKPYIRHKDVNVRVSSLTLLGAIVSTHAPLPEVQLLLQQPCSSGLSSSSSATPHLSTPDGW
KTFPAGSSLEEASLSSPKGSSEPCWLIRLCISTVVLPKEDSCSGSDAGSALGSTYEPSPMRLEALQVLAH
LARGYFSTAQLYLMELGEVICKCMCEANPSIQLHGVKLLEELGAGLIQQYKPDSNIAPEQRVPVHLVVVF
WTAMLSGPLPRALQSAEHPTLQASACDALSSILPEAFSSLPNDKQILCITVLLGLNDSKNHLVKAATSRA
LGVYVLFPCLRQDVIFVADTANAILMSLQDKSLNVRAKAAWSLGNLTDTLIVNMDTPDPSFQDEFSGLLL
LKMLQCAIQASTDKDKVKSNAVRALGNLLHFLQPSHVERPRFAEIIEESIQALISTVVNEAAMKVRWNAC
YAMGNVFKNPALPLGTAPWTSQAYKALTSVVMSCKNFKVRIRSAAALSVPSKRGQYGSLEQFIQIWSALV
TALQKSEDTTDFLEFKYCASLRTHICQALLHLLSLASASDLPGIQETLKLHGDMIRSYILQFLKSGAEGD
DPGAVHTPQERVQMVRVALKHIHRVQTLAGDTARGAIMGFLEDILTVHCDSSGEQVMLRGPSDQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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