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Report for CCDS8263.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8263.1 Public Homo sapiens 11 DDIAS 24 110 108 CCDS HistoryNCBI Gene:220042Re-query CCDS DB by CCDS ID:8263.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 8263.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000329143.4 ENSP00000329930.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000329143.4Link to Ensembl Protein Viewer:ENSP00000329930.4Re-query CCDS DB by Nucleotide ID:ENST00000329143Re-query CCDS DB by Protein ID:ENSP00000329930
Original member Current member EBI ENST00000533655.6 ENSP00000435421.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000533655.6Link to Ensembl Protein Viewer:ENSP00000435421.1Re-query CCDS DB by Nucleotide ID:ENST00000533655Re-query CCDS DB by Protein ID:ENSP00000435421
Original member Current member NCBI NM_001363481.2 NP_001350410.1 Accepted alive Link to Nucleotide Sequence:NM_001363481.2Link to Protein Sequence:NP_001350410.1Re-query CCDS DB by Nucleotide ID:NM_001363481Re-query CCDS DB by Protein ID:NP_001350410Link to BLAST:NP_001350410.1
Original member Current member NCBI NM_145018.4 NP_659455.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145018.4Link to Protein Sequence:NP_659455.3Re-query CCDS DB by Nucleotide ID:NM_145018Re-query CCDS DB by Protein ID:NP_659455Link to BLAST:NP_659455.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001350410.1 998 Q8IXT1-1 998 100% 0 0
NP_659455.3 998 Q8IXT1-1 998 100% 0 0

Chromosomal Locations for CCDS 8263.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 82914739 82914851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 82928777 82928938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 82930157 82930274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 82931732 82934335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2997 nt):
ATGAACAGAAGACGAAAATTTCTTCTAGCCTCAGTACTTGCTCTCCAGAATTCAAGTTTTATATATCCAT
CATGTCAGAAGTGCTTCTCTAGGATAATCCTGGTCTCCAAAAGGTCTAATTGTCCAAAATGTGGCTCTAC
TGGTGAATCTGGAAATGCCAATTACAGATACAAACTTTCCTTAAAAGTTGCAGAATCAAACAAATTGTTT
GTTATTACTGTATTTGGAAGTTGCTTAGATACATTTTTTGGTCTTACTGCCACTGGTTTGCACAGGTACA
TTCAGGATCCTAATAAAATTCCAGAAACACTGGACAATGATACAACTCAGAATCTATTAACTAAAGCAGT
TGAAACTTGCTTTGTTGGACAAAGCTTTATTTTTGGAGTGACGAATTTTGAAAACCAACCTGGACAAGGT
TCAGATGCCAGTAACTTCTTACAGCAATGCTCTGACCACAAAAGAAAAGCCAAAGCACTAGTGGCTTGCC
AGATTGTTCTACCAGACCCAGGTATTGCAGGCTTTACTGTCATTGACTACTTCCATCAACTTTTGCAGAC
TTTTAATTTCAGGAAACTTCAGTGTGACTCTCAGGCACCTAACAATCACTTACTTGCTTTAGATCACTCA
AATAGTGATCTCAGCAGCATATATACTTCTGACAGCACTTCTGATTTTTTCAAGTCCTGCAGCAAGGATA
CTTTTTCAAAATTCTGGCAGCCATCACTTGAATTCACTTGCATTGTTTCACAACTAACAGATAATGATGA
TTTTTCAGCTTCAGAACAAAGTAAGGCCTTTGGTACTCTTCAGCAGAACAGAAAGTCCATCTCCATTGCA
GAGGCCACTGGTTCCAGTAGCTGCCATGATCCCATTCAGGATTCATGGAGCCTTGTTTCATATATGGATA
AAAAGAGTACAGCAGAAAAGTTGGGTAAAGAACTTGGCTTACAAGCTAAGGAGCTGAGTGCAGTTCACAG
CAGTCATCATGAAATTGGAGTTAATGACTCTAATTTATTCTCTTTGGAAATGCGAGAGCCCCTTGAGTCA
AGTAATACAAAATCCTTCCACAGTGCAGTGGAAATTAAAAATAGGTCCCAGCATGAGCTACCATGTTTTC
AGCATCATGGTATAGATACCCCAACTAGCCTTCAGAAGAGATCTGCATGTTGTCCACCTTCGTTACTCAG
ACTTGAAGAGACAGCCAGCAGTTCCCAGGATGGTGACCCTCAAATTTGGGATGATCTGCCATTCTCTGAA
AGCCTGAACAAGTTTCTGGCAGTTCTTGAAAGTGAGATTGCTGTAACCCAGGCAGATGTCAGTAGTAGGA
AACATCATGTAGATAATGACATTGATAAATTTCATGCAGACCACAGCAGGTTATCTGTGACTCCCCAGAG
AACTACTGGAGCCCTGCATACACCACCTATAGCTTTAAGATCATCACAAGTAATAGTCAAAGCAAACTGT
AGCAAAGATGACTTCCTTTTCAACTGTAAAGGAAATCTAAGTCCTAGTGTTGAAAAGGAGTCACAACCAG
ATAACAAAGTAGAGGCTGTCTCTGTAAATCATAATGGAAGAGATATGTCAGAATATTTTTTACCGAATCC
TTACCTGTCAGCTCTGTCTTCATCTTCAAAAGATTTAGAAACAATAGTTACTCTTAAGAAGACTATCAGA
ATCTCACCACACAGGGAGAGTGACCATTCTAGTCTAAATAACAAATATTTGAATGGATGTGGAGAAATAT
CAGTTTCAGAAATGAATGAAAAGTTGACAACTCTGTGTTATAGGAAGTATAATGATGTCTCTGATCTTTG
CAAATTAGAAAATAAACAATATTGTAGGTGGTCCAAGAACCAAGATGACAGTTTTACAATTTGCAGGAAA
CTTACATATCCTTTAGAAACTCTTTGCAATAGTCCAAATAGAAGTACAAATACATTGAAAGAAATGCCTT
GGGGACATATCAATAACAACGTAACACAGAGCTATTCTATTGGTTATGAAGGTAGCTATGATGCCTCTGC
TGATCTCTTTGATGATATTGCTAAAGAAATGGACATTGCAACTGAGATTACCAAAAAATCACAGGATATT
TTGTTAAAATGGGGAACATCTTTGGCAGAAAGTCACCCTTCAGAGTCTGATTTTTCACTGAGATCACTTT
CTGAAGACTTCATCCAGCCTTCACAAAAATTATCCTTGCAAAGCCTATCTGACTCTAGGCATTCAAGAAC
ATGCTCTCCAACACCTCATTTTCAATCAGATTCAGAATATAATTTTGAAAATAGTCAAGACTTTGTTCCA
TGTTCACAGTCAACTCCAATTTCAGGGTTCCACCAAACAAGAATTCATGGGATAAACAGAGCTTTCAAAA
AACCTGTATTTTATTCAGATCTTGATGGTAACTATGAAAAAATAAGGATTTTCCCTGAAAATGACAAACA
GCAAGCCAGCCCAAGCTGTCCAAAAAATATAAAAACACCTAGCCAGAAAATCAGAAGCCCTATTGTATCT
GGTGTTTCACAACCAGACGTTTTCAATCACTACCCTTTTGCTGAGTGCCATGAAACTGATAGTGATGAAT
GGGTCCCTCCTACCACACAAAAAATATTTCCTTCAGATATGCTTGGATTCCAAGGCATAGGTCTAGGGAA
ATGCCTTGCTGCCTATCATTTCCCTGATCAACAAGAGTTACCAAGAAAGAAACTGAAACATATTAGACAA
GGAACCAATAAAGGTTTAATTAAGAAGAAATTAAAGAATATGCTTGCAGCAGTTGTTACGAAAAAGAAAA
CTCATAAATATAACTGTAAAAGTTCAGGCTGGATTTCCAAATGTCCAGACATTCAAGTCTTAGCAGCACC
TCAGCTGCACCCTATTCTTGGACCTGATTCTTGTTCAGAAGTCAAATGTTGCCTTCCATTTTCAGAAAAA
GGCCCACCTTCAGTGTGTGAAACTCGAAGTGCTTGGTCACCTGAATTGTTTTCATAA

Translation (998 aa):
MNRRRKFLLASVLALQNSSFIYPSCQKCFSRIILVSKRSNCPKCGSTGESGNANYRYKLSLKVAESNKLF
VITVFGSCLDTFFGLTATGLHRYIQDPNKIPETLDNDTTQNLLTKAVETCFVGQSFIFGVTNFENQPGQG
SDASNFLQQCSDHKRKAKALVACQIVLPDPGIAGFTVIDYFHQLLQTFNFRKLQCDSQAPNNHLLALDHS
NSDLSSIYTSDSTSDFFKSCSKDTFSKFWQPSLEFTCIVSQLTDNDDFSASEQSKAFGTLQQNRKSISIA
EATGSSSCHDPIQDSWSLVSYMDKKSTAEKLGKELGLQAKELSAVHSSHHEIGVNDSNLFSLEMREPLES
SNTKSFHSAVEIKNRSQHELPCFQHHGIDTPTSLQKRSACCPPSLLRLEETASSSQDGDPQIWDDLPFSE
SLNKFLAVLESEIAVTQADVSSRKHHVDNDIDKFHADHSRLSVTPQRTTGALHTPPIALRSSQVIVKANC
SKDDFLFNCKGNLSPSVEKESQPDNKVEAVSVNHNGRDMSEYFLPNPYLSALSSSSKDLETIVTLKKTIR
ISPHRESDHSSLNNKYLNGCGEISVSEMNEKLTTLCYRKYNDVSDLCKLENKQYCRWSKNQDDSFTICRK
LTYPLETLCNSPNRSTNTLKEMPWGHINNNVTQSYSIGYEGSYDASADLFDDIAKEMDIATEITKKSQDI
LLKWGTSLAESHPSESDFSLRSLSEDFIQPSQKLSLQSLSDSRHSRTCSPTPHFQSDSEYNFENSQDFVP
CSQSTPISGFHQTRIHGINRAFKKPVFYSDLDGNYEKIRIFPENDKQQASPSCPKNIKTPSQKIRSPIVS
GVSQPDVFNHYPFAECHETDSDEWVPPTTQKIFPSDMLGFQGIGLGKCLAAYHFPDQQELPRKKLKHIRQ
GTNKGLIKKKLKNMLAAVVTKKKTHKYNCKSSGWISKCPDIQVLAAPQLHPILGPDSCSEVKCCLPFSEK
GPPSVCETRSAWSPELFS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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