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Report for CCDS7276.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7276.1 Public Homo sapiens 10 ATOH7 24 110 108 CCDS HistoryNCBI Gene:220202Re-query CCDS DB by CCDS ID:7276.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7276.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373673.5 ENSP00000362777.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000373673.5Link to Ensembl Protein Viewer:ENSP00000362777.3Re-query CCDS DB by Nucleotide ID:ENST00000373673Re-query CCDS DB by Protein ID:ENSP00000362777
Original member Current member NCBI NM_145178.4 NP_660161.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145178.4Link to Protein Sequence:NP_660161.1Re-query CCDS DB by Nucleotide ID:NM_145178Re-query CCDS DB by Protein ID:NP_660161Link to BLAST:NP_660161.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_660161.1 152 Q8N100 152 100% 0 0

Chromosomal Locations for CCDS 7276.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 68231219 68231677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (459 nt):
ATGAAGTCCTGCAAGCCCAGCGGCCCGCCGGCGGGAGCGCGCGTTGCACCCCCGTGCGCGGGCGGCACCG
AGTGCGCGGGCACGTGCGCCGGGGCCGGGCGGCTGGAGAGCGCGGCGCGCAGGCGCCTGGCGGCCAACGC
GCGCGAGCGCCGCCGCATGCAGGGGCTCAACACTGCCTTCGACCGCTTACGCAGGGTGGTTCCCCAGTGG
GGCCAGGATAAAAAGCTGTCCAAGTACGAGACCCTGCAGATGGCCCTGAGCTACATCATGGCTCTGACCC
GGATCCTGGCCGAGGCCGAGCGATTCGGCTCGGAGCGGGACTGGGTGGGTCTCCACTGTGAGCACTTCGG
CCGCGACCACTACCTCCCGTTCCCGGGCGCGAAGCTGCCGGGCGAGAGCGAGCTGTACAGCCAGAGACTC
TTCGGCTTCCAGCCCGAGCCCTTCCAGATGGCCACCTAG

Translation (152 aa):
MKSCKPSGPPAGARVAPPCAGGTECAGTCAGAGRLESAARRRLAANARERRRMQGLNTAFDRLRRVVPQW
GQDKKLSKYETLQMALSYIMALTRILAEAERFGSERDWVGLHCEHFGRDHYLPFPGAKLPGESELYSQRL
FGFQPEPFQMAT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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