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Report for CCDS41659.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41659.1 Public Homo sapiens 11 HNRNPUL2 24 110 108 CCDS HistoryNCBI Gene:221092Re-query CCDS DB by CCDS ID:41659.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41659.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000301785.7 ENSP00000301785.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000301785.7Link to Ensembl Protein Viewer:ENSP00000301785.5Re-query CCDS DB by Nucleotide ID:ENST00000301785Re-query CCDS DB by Protein ID:ENSP00000301785
Original member Current member NCBI NM_001079559.3 NP_001073027.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001079559.3Link to Protein Sequence:NP_001073027.1Re-query CCDS DB by Nucleotide ID:NM_001079559Re-query CCDS DB by Protein ID:NP_001073027Link to BLAST:NP_001073027.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001073027.1 747 Q1KMD3 747 100% 0 0

Chromosomal Locations for CCDS 41659.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 62715299 62715379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62715500 62715607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62715864 62715937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62716989 62717189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62720023 62720191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62721295 62721423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62721820 62721942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62722117 62722380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62722601 62722713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62722813 62722903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62723587 62723726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62723914 62723990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62724291 62724426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62726619 62727156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2244 nt):
ATGGAGGTGAAGCGGCTGAAAGTGACCGAGCTGCGGTCGGAGCTGCAGCGGCGGGGCCTGGACTCGCGCG
GCCTCAAGGTGGATCTGGCGCAGCGGCTGCAGGAGGCGCTGGACGCCGAGATGCTCGAGGACGAGGCCGG
CGGCGGCGGGGCCGGGCCCGGCGGGGCCTGCAAGGCGGAGCCTCGGCCTGTGGCCGCGTCGGGCGGCGGC
CCGGGCGGGGACGAGGAGGAGGACGAAGAGGAGGAGGAGGAGGACGAGGAGGCGCTGCTTGAGGACGAGG
ACGAGGAGCCACCCCCTGCTCAAGCCTTGGGTCAGGCCGCGCAGCCGCCGCCGGAGCCCCCGGAGGCGGC
AGCCATGGAGGCCGCGGCCGAGCCAGATGCTTCCGAGAAGCCGGCGGAGGCCACGGCCGGGTCAGGCGGG
GTAAATGGTGGCGAAGAGCAGGGCCTCGGCAAGAGGGAGGAAGACGAACCCGAGGAGCGGAGCGGGGACG
AGACGCCGGGATCCGAGGTGCCGGGTGACAAGGCCGCCGAGGAACAGGGAGATGACCAGGATAGTGAAAA
GTCAAAACCAGCAGGCTCAGATGGTGAGCGGCGGGGGGTAAAGAGACAGCGGGATGAGAAGGATGAACAT
GGCCGAGCTTACTATGAATTCCGAGAGGAGGCTTACCACAGCCGCTCAAAGTCTCCACTGCCTCCTGAAG
AAGAGGCAAAAGATGAGGAGGAGGATCAAACTCTTGTGAACCTGGACACGTATACCTCGGATCTGCATTT
TCAAGTGAGCAAAGACCGCTATGGAGGGCAGCCACTTTTCTCAGAGAAGTTCCCCACCCTTTGGTCTGGG
GCAAGGAGTACTTACGGAGTGACAAAGGGAAAAGTCTGCTTTGAGGCAAAGGTAACCCAGAATCTCCCAA
TGAAAGAAGGCTGCACAGAGGTCTCTCTCCTTCGAGTTGGGTGGTCTGTTGATTTTTCCCGTCCACAGCT
TGGTGAAGATGAATTCTCTTACGGTTTCGATGGACGAGGACTCAAGGCAGAAAATGGACAATTTGAGGAA
TTTGGCCAGACTTTTGGGGAGAATGATGTTATTGGCTGCTTTGCTAATTTTGAGACTGAAGAAGTAGAAC
TTTCCTTCTCCAAGAATGGAGAAGACCTAGGTGTGGCATTCTGGATCAGCAAGGATTCCCTGGCAGACCG
GGCCCTTCTACCCCATGTCCTCTGCAAAAATTGTGTTGTAGAATTAAACTTCGGTCAGAAGGAGGAGCCC
TTCTTCCCACCACCAGAAGAGTTTGTGTTCATTCATGCTGTGCCTGTTGAGGAGCGTGTACGCACTGCAG
TCCCTCCCAAGACCATAGAGGAATGTGAGGTGATTCTGATGGTGGGACTACCCGGATCTGGAAAGACCCA
GTGGGCACTGAAATATGCAAAAGAAAACCCTGAGAAAAGATACAATGTCCTGGGAGCTGAGACTGTGCTC
AATCAAATGAGGATGAAGGGTCTCGAGGAGCCAGAGATGGACCCCAAAAGCCGAGACCTTTTAGTTCAGC
AAGCCTCCCAGTGCCTTAGTAAGCTGGTCCAGATTGCTTCCCGGACAAAGAGGAACTTTATTCTTGATCA
GTGTAATGTGTACAATTCTGGCCAACGGCGGAAGCTATTGCTGTTCAAGACCTTCTCTCGGAAAGTGGTG
GTGGTTGTCCCTAATGAGGAAGATTGGAAGAAGAGGCTGGAGTTGAGGAAGGAAGTAGAGGGAGATGATG
TGCCTGAATCTATAATGCTGGAGATGAAAGCCAACTTCTCTTTGCCTGAAAAATGCGACTATATGGATGA
GGTGACATATGGGGAGCTGGAGAAGGAGGAAGCTCAGCCCATTGTCACTAAGTACAAGGAGGAGGCAAGG
AAGCTTCTGCCCCCCTCCGAGAAGCGGACAAATCGCCGAAACAACCGAAACAAGCGTAACCGGCAGAACC
GAAGCCGGGGCCAAGGCTATGTGGGCGGGCAGCGCCGAGGCTACGACAACCGGGCCTACGGGCAGCAGTA
CTGGGGGCAGCCTGGAAACAGAGGGGGTTACCGTAATTTCTATGATCGATACAGGGGAGACTATGATCGA
TTTTACGGGCGAGATTATGAGTACAACAGATACAGAGACTATTACAGACAATACAATCGGGATTGGCAGA
GTTACTACTACCACCACCCCCAGGACAGAGACCGATACTACAGGAATTACTACGGGTACCAAGGGTATCG
GTGA

Translation (747 aa):
MEVKRLKVTELRSELQRRGLDSRGLKVDLAQRLQEALDAEMLEDEAGGGGAGPGGACKAEPRPVAASGGG
PGGDEEEDEEEEEEDEEALLEDEDEEPPPAQALGQAAQPPPEPPEAAAMEAAAEPDASEKPAEATAGSGG
VNGGEEQGLGKREEDEPEERSGDETPGSEVPGDKAAEEQGDDQDSEKSKPAGSDGERRGVKRQRDEKDEH
GRAYYEFREEAYHSRSKSPLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSG
ARSTYGVTKGKVCFEAKVTQNLPMKEGCTEVSLLRVGWSVDFSRPQLGEDEFSYGFDGRGLKAENGQFEE
FGQTFGENDVIGCFANFETEEVELSFSKNGEDLGVAFWISKDSLADRALLPHVLCKNCVVELNFGQKEEP
FFPPPEEFVFIHAVPVEERVRTAVPPKTIEECEVILMVGLPGSGKTQWALKYAKENPEKRYNVLGAETVL
NQMRMKGLEEPEMDPKSRDLLVQQASQCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVV
VVVPNEEDWKKRLELRKEVEGDDVPESIMLEMKANFSLPEKCDYMDEVTYGELEKEEAQPIVTKYKEEAR
KLLPPSEKRTNRRNNRNKRNRQNRSRGQGYVGGQRRGYDNRAYGQQYWGQPGNRGGYRNFYDRYRGDYDR
FYGRDYEYNRYRDYYRQYNRDWQSYYYHHPQDRDRYYRNYYGYQGYR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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