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Report for CCDS55241.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55241.1 Public Homo sapiens 8 MYBL1 24 110 108 CCDS HistoryNCBI Gene:4603Re-query CCDS DB by CCDS ID:55241.1Re-query CCDS DB by GeneID:4603See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55241.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000524176.2 ENSP00000428011.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000524176.2Link to Ensembl Protein Viewer:ENSP00000428011.2Re-query CCDS DB by Nucleotide ID:ENST00000524176Re-query CCDS DB by Protein ID:ENSP00000428011
Original member Current member NCBI NM_001144755.3 NP_001138227.1 Accepted alive Link to Nucleotide Sequence:NM_001144755.3Link to Protein Sequence:NP_001138227.1Re-query CCDS DB by Nucleotide ID:NM_001144755Re-query CCDS DB by Protein ID:NP_001138227Link to BLAST:NP_001138227.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138227.1 692 P10243-2 692 100% 0 0

Chromosomal Locations for CCDS 55241.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 66564697 66564825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66566684 66566788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66566876 66566992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66572482 66572596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66573364 66573506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66576007 66576375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66580133 66580366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66592440 66592544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66593120 66593194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66595583 66595757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66597330 66597550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66599050 66599142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66601698 66601769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66602418 66602523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66612819 66612838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2079 nt):
ATGGCGAAGAGGTCGCGCAGTGAGGATGAGGATGATGACCTTCAGTATGCCGATCATGATTATGAAGTAC
CACAACAAAAAGGACTGAAGAAACTCTGGAACAGAGTAAAATGGACAAGGGACGAGGATGATAAATTAAA
GAAGTTGGTTGAACAACATGGAACTGATGATTGGACTCTAATTGCTAGTCATCTTCAAAATCGCTCTGAT
TTTCAGTGCCAGCATCGATGGCAGAAAGTTTTAAATCCTGAATTGATAAAGGGTCCTTGGACTAAAGAAG
AAGATCAGAGGGTTATTGAATTAGTTCAGAAATATGGGCCAAAAAGATGGTCTTTAATTGCAAAACATTT
AAAAGGAAGAATAGGCAAGCAGTGTAGAGAAAGATGGCATAATCATCTGAATCCTGAGGTAAAGAAATCT
TCCTGGACAGAAGAGGAGGACAGGATCATCTATGAAGCACATAAGCGGTTGGGAAATCGTTGGGCAGAAA
TTGCCAAACTACTTCCAGGAAGGACTGATAATTCTATCAAAAATCATTGGAATTCTACTATGCGAAGAAA
AGTGGAACAGGAGGGCTATTTACAAGATGGAATAAAATCAGAACGATCTTCATCTAAACTTCAACACAAA
CCTTGTGCAGCTATGGATCATATGCAAACCCAGAATCAGTTTTACATACCTGTTCAGATCCCTGGGTATC
AGTATGTGTCACCTGAAGGCAATTGTATAGAACATGTTCAGCCTACTTCTGCCTTTATTCAGCAACCCTT
CATTGATGAAGATCCTGATAAGGAAAAGAAAATAAAGGAACTTGAGATGCTTCTTATGTCAGCTGAGAAT
GAAGTTAGAAGAAAGCGAATTCCATCACAGCCTGGAAGTTTTTCTAGCTGGTCTGGTAGTTTCCTCATGG
ATGATAACATGTCTAATACTCTAAATAGCCTTGACGAGCACACTAGTGAGTTTTACAGTATGGATGAAAA
TCAGCCTGTGTCTGCTCAGCAGAATTCACCCACAAAGTTCCTGGCCGTGGAGGCAAACGCTGTGTTATCC
TCTTTGCAGACCATCCCAGAATTTGCAGAGACTCTAGAACTTATTGAATCTGATCCTGTAGCATGGAGTG
ACGTTACCAGTTTTGATATTTCTGATGCTGCTGCTTCTCCTATCAAATCCACCCCAGTTAAATTAATGAG
AATTCAGCACAATGAAGGAGCCATGGAATGCCAATTTAACGTCAGTCTTGTACTTGAAGGGAAAAAAAAC
ACTTGTAATGGTGGCAACAGTGAAGCTGTTCCTTTAACATCCCCAAATATAGCCAAGTTTAGCACTCCAC
CAGCCATCCTCAGAAAGAAGAGAAAAATGCGAGTGGGTCATTCCCCAGGCAGCGAACTTAGGGATGGCTC
ATTGAACGATGGTGGTAATATGGCGCTAAAACATACACCACTGAAAACACTACCATTTTCTCCTTCACAG
TTTTTCAACACATGTCCTGGTAATGAACAACTTAATATAGAAAATCCTTCATTTACATCAACCCCTATTT
GTGGGCAGAAAGCTCTCATTACAACTCCTCTTCATAAGGAAACAACTCCCAAAGATCAAAAGGAAAATGT
AGGGTTTAGAACACCTACTATTAGAAGATCTATACTGGGTACCACACCAAGAACTCCTACTCCTTTTAAG
AATGCGCTTGCTGCTCAGGAGAAAAAATATGGACCTCTTAAAATTGTGTCCCAGCCACTTGCTTTCTTGG
AAGAAGATATTCGGGAAGTTTTAAAAGAAGAAACTGGAACAGACCTATTCCTCAAAGAGGAAGATGAACC
TGCTTACAAAAGCTGCAAACAAGAGAATACCGCTTCTGGGAAGAAAGTCAGAAAATCACTAGTCTTAGAT
AATTGGGAAAAAGAAGAATCAGGCACTCAACTGTTGACTGAAGACATTTCAGACATGCAGTCAAATTGTG
AATGGGAAACAGTGGTTTATGGGAAGACAGAAGACCAACTTATTATGACTGAACAAGCAAGAAGATATCT
GAGTACTTACACAGCTACCAGTAGTACTTCAAGAGCTCTCATACTGTAA

Translation (692 aa):
MAKRSRSEDEDDDLQYADHDYEVPQQKGLKKLWNRVKWTRDEDDKLKKLVEQHGTDDWTLIASHLQNRSD
FQCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKS
SWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQEGYLQDGIKSERSSSKLQHK
PCAAMDHMQTQNQFYIPVQIPGYQYVSPEGNCIEHVQPTSAFIQQPFIDEDPDKEKKIKELEMLLMSAEN
EVRRKRIPSQPGSFSSWSGSFLMDDNMSNTLNSLDEHTSEFYSMDENQPVSAQQNSPTKFLAVEANAVLS
SLQTIPEFAETLELIESDPVAWSDVTSFDISDAAASPIKSTPVKLMRIQHNEGAMECQFNVSLVLEGKKN
TCNGGNSEAVPLTSPNIAKFSTPPAILRKKRKMRVGHSPGSELRDGSLNDGGNMALKHTPLKTLPFSPSQ
FFNTCPGNEQLNIENPSFTSTPICGQKALITTPLHKETTPKDQKENVGFRTPTIRRSILGTTPRTPTPFK
NALAAQEKKYGPLKIVSQPLAFLEEDIREVLKEETGTDLFLKEEDEPAYKSCKQENTASGKKVRKSLVLD
NWEKEESGTQLLTEDISDMQSNCEWETVVYGKTEDQLIMTEQARRYLSTYTATSSTSRALIL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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