NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS10774.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10774.1 Public Homo sapiens 16 CPNE2 24 110 108 CCDS HistoryNCBI Gene:221184Re-query CCDS DB by CCDS ID:10774.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10774.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000290776.13 ENSP00000290776.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000290776.13Link to Ensembl Protein Viewer:ENSP00000290776.8Re-query CCDS DB by Nucleotide ID:ENST00000290776Re-query CCDS DB by Protein ID:ENSP00000290776
Original member Current member EBI ENST00000535318.6 ENSP00000439018.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000535318.6Link to Ensembl Protein Viewer:ENSP00000439018.2Re-query CCDS DB by Nucleotide ID:ENST00000535318Re-query CCDS DB by Protein ID:ENSP00000439018
Original member Current member EBI ENST00000565874.5 ENSP00000456042.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000565874.5Link to Ensembl Protein Viewer:ENSP00000456042.1Re-query CCDS DB by Nucleotide ID:ENST00000565874Re-query CCDS DB by Protein ID:ENSP00000456042
Original member Current member NCBI NM_152727.6 NP_689940.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152727.6Link to Protein Sequence:NP_689940.3Re-query CCDS DB by Nucleotide ID:NM_152727Re-query CCDS DB by Protein ID:NP_689940Link to BLAST:NP_689940.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689940.3 548 Q96FN4-1 548 100% 0 0

Chromosomal Locations for CCDS 10774.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 57110743 57110922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57113288 57113467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57115476 57115550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57117496 57117567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57119195 57119278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57119561 57119650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57121093 57121191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57121674 57121760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57123414 57123473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57125860 57125993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57127849 57127903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57134775 57134826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57137149 57137282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57146085 57146321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57147551 57147658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1647 nt):
ATGGCCCACATACCCAGTGGGGGTGCCCCAGCAGCGGGGGCAGCCCCCATGGGCCCCCAGTATTGCGTGT
GCAAGGTGGAGCTGTCAGTGAGTGGCCAGAACCTACTGGACCGGGATGTTACCTCCAAGTCCGACCCCTT
CTGTGTCCTCTTTACAGAGAACAATGGCAGATGGATCGAGTACGACAGGACAGAAACCGCGATCAACAAC
CTCAACCCCGCCTTCTCCAAGAAGTTCGTGCTTGACTACCACTTCGAGGAGGTACAGAAGCTCAAGTTCG
CGCTCTTTGACCAGGACAAGTCCAGTATGCGGCTGGACGAGCATGACTTCCTGGGCCAGTTCTCCTGCAG
CCTGGGCACGATCGTCTCCAGCAAGAAGATCACTAGGCCTCTGCTGCTGCTGAATGACAAGCCTGCGGGG
AAGGGCTTGATTACGATCGCTGCCCAGGAGCTGTCCGACAACCGCGTCATCACACTAAGCCTGGCGGGCA
GGAGGCTGGACAAGAAGGACCTCTTTGGGAAGTCAGACCCCTTTCTGGAGTTTTATAAGCCAGGAGACGA
TGGCAAGTGGATGCTGGTCCACAGGACTGAGGTGATCAAGTACACACTGGACCCTGTGTGGAAGCCATTC
ACAGTGCCCTTGGTGTCCCTGTGTGATGGGGACATGGAGAAGCCCATCCAGGTCATGTGCTACGACTATG
ACAATGACGGGGGCCATGACTTCATCGGCGAGTTCCAGACCTCAGTGTCACAGATGTGTGAGGCTCGAGA
CAGCGTCCCGCTGGAGTTCGAGTGCATCAACCCCAAGAAGCAGAGGAAGAAGAAGAACTATAAAAACTCG
GGCATCATCATCCTGCGATCCTGCAAGATAAACCGAGACTACTCCTTCCTTGACTACATCCTGGGAGGCT
GCCAGCTCATGTTCACCGTTGGAATAGACTTTACAGCCTCCAACGGGAATCCCCTCGACCCTTCCTCTTT
GCACTATATCAACCCTATGGGCACCAACGAATATCTGTCGGCCATCTGGGCTGTTGGGCAGATCATTCAG
GACTACGACAGTGATAAGATGTTTCCAGCTCTGGGATTCGGGGCCCAGTTACCCCCAGACTGGAAGGTCT
CCCATGAGTTTGCCATCAACTTCAACCCCACCAACCCCTTCTGCTCAGGTGTGGATGGTATTGCCCAGGC
GTACTCAGCTTGCCTGCCCCACATCCGCTTCTACGGTCCTACCAATTTCTCCCCCATCGTCAACCACGTG
GCCCGGTTTGCGGCCCAGGCCACACAACAGCGGACGGCCACGCAGTACTTCATCCTCCTCATCATCACGG
ACGGGGTCATCAGTGACATGGAGGAGACACGGCATGCCGTGGTGCAGGCTTCCAAGCTGCCCATGTCCAT
CATCATCGTGGGCGTGGGCAATGCGGACTTCGCTGCCATGGAGTTCCTGGATGGGGACAGCCGCATGCTG
CGCTCCCACACGGGGGAGGAGGCAGCCCGCGATATTGTGCAGTTCGTTCCCTTTCGAGAGTTCCGCAACG
CAGCAAAAGAGACCTTGGCCAAAGCTGTGCTGGCGGAGCTGCCCCAACAAGTTGTGCAGTATTTCAAGCA
TAAAAACCTGCCCCCCACCAACTCGGAGCCCGCCTGA

Translation (548 aa):
MAHIPSGGAPAAGAAPMGPQYCVCKVELSVSGQNLLDRDVTSKSDPFCVLFTENNGRWIEYDRTETAINN
LNPAFSKKFVLDYHFEEVQKLKFALFDQDKSSMRLDEHDFLGQFSCSLGTIVSSKKITRPLLLLNDKPAG
KGLITIAAQELSDNRVITLSLAGRRLDKKDLFGKSDPFLEFYKPGDDGKWMLVHRTEVIKYTLDPVWKPF
TVPLVSLCDGDMEKPIQVMCYDYDNDGGHDFIGEFQTSVSQMCEARDSVPLEFECINPKKQRKKKNYKNS
GIIILRSCKINRDYSFLDYILGGCQLMFTVGIDFTASNGNPLDPSSLHYINPMGTNEYLSAIWAVGQIIQ
DYDSDKMFPALGFGAQLPPDWKVSHEFAINFNPTNPFCSGVDGIAQAYSACLPHIRFYGPTNFSPIVNHV
ARFAAQATQQRTATQYFILLIITDGVISDMEETRHAVVQASKLPMSIIIVGVGNADFAAMEFLDGDSRML
RSHTGEEAARDIVQFVPFREFRNAAKETLAKAVLAELPQQVVQYFKHKNLPPTNSEPA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH