CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS34590.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
34590.1 |
Public |
Homo sapiens |
7 |
SDK1 |
24 |
110 |
108 |
|
Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 34590.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENST00000404826.7 |
ENSP00000385899.2 |
MANE Select |
Accepted |
alive |
|
|
|
NCBI |
NM_152744.4 |
NP_689957.3 |
MANE Select |
Accepted |
alive |
|
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_689957.3 |
2213 |
Q7Z5N4-1 |
2213 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 34590.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (6642 nt): ATGGCCCGGGGCGCCCGGCCCTCGGCGGCCGGTGGCGGCGGCGGCGGCGCGGAGCCCCCTGAGCGCGCGG GCCCCGGGCGGCCGCGGGGATCCCCGCCCGGCCGCGCCCGCCCCTCGCTGGCGCCGCGCCCCGGCCCGGA GCCCTCGCGACCCCGGGCGGCGCCCGAGACCTCCGGCGGGGACACGGCGGGCGCGGGGCGGTGCGGCGGG CGGCGGGCGGCAAAGTTGGGGCCGGGCCGCCGCGGCTGGTGGGCGCTGCTGGCGCTGCAGCTGCACTTGC TCCGGGCGCTGGCGCAAGATGATGTTGCTCCATATTTTAAAACGGAGCCAGGCCTACCACAGATCCACCT GGAAGGGAACCGCCTTGTTCTCACCTGCCTTGCCGAAGGGAGCTGGCCTTTGGAGTTCAAGTGGATGCGC GATGACAGTGAGCTCACCACCTACAGCAGCGAATATAAGTACATTATTCCATCTTTGCAGAAGCTCGATG CTGGGTTTTACCGCTGCGTGGTGCGAAACAGAATGGGAGCACTCCTGCAAAGAAAATCAGAAGTTCAAGT CGCATATATGGGAAGTTTCATGGATACGGACCAGAGGAAAACAGTTTCTCAAGGACGTGCAGCGATTCTA AACCTGCTGCCCATCACCAGCTACCCCAGACCTCAAGTGACTTGGTTTAGAGAAGGGCACAAGATTATTC CAAGCAACAGAATAGCCATCACATTGGAGAATCAGCTGGTGATCCTCGCCACCACAACCAGTGATGCCGG GGCATACTACGTGCAGGCCGTGAATGAGAAAAATGGAGAAAACAAGACAAGCCCATTCATTCATTTGAGC ATAGCAAGAGATGTTGGCACACCTGAAACCATGGCCCCAACCATTGTGGTTCCCCCGGGCAACAGAAGTG TGGTGGCTGGATCCAGTGAGACCACCTTGGAATGTATAGCCAGTGCCAGGCCTGTGGAGGACCTGAGTGT GACCTGGAAGAGGAATGGAGTGAGAATCACCAGTGGCCTCCACAGCTTTGGAAGACGCCTCACCATCAGC AACCCGACGTCCGCGGACACCGGGCCATACGTCTGCGAGGCGGCGCTGCCGGGGAGCGCTTTTGAACCGG CCAGGGCGACGGCCTTTCTTTTCATCATAGAGCCACCATATTTTACTGCTGAGCCCGAGAGTCGGATTTC AGCTGAAGTAGAAGAAACTGTGGACATCGGATGTCAAGCCATGGGGGTCCCCCTTCCCACCCTCCAGTGG TACAAGGATGCCATCTCCATCAGCAGGCTCCAGAATCCTCGATACAAAGTGCTCGCCAGCGGAGGCCTGC GCATCCAGAAGCTGCGTCCAGAGGACTCCGGAATCTTCCAGTGCTTCGCCAGCAATGAAGGAGGGGAGAT CCAGACCCACACCTACCTGGATGTAACCAATATCGCTCCAGTGTTCACCCAGCGGCCAGTGGACACCACA GTTACTGACGGGATGACAGCCATTCTAAGGTGTGAGGTGTCCGGGGCTCCCAAACCCGCCATCACCTGGA AAAGAGAAAACCACATTCTGGCCAGTGGCTCTGTCCGGATTCCTAGGTTCATGCTTCTTGAATCGGGGGG TCTACAGATCGCGCCCGTCTTCATCCAGGATGCCGGCAACTACACCTGCTATGCGGCCAACACAGAGGGC TCCCTGAATGCATCGGCCACGCTCACTGTGTGGAATCGGACGTCCATCGTCCACCCTCCTGAGGACCACG TGGTGATTAAGGGGACCACGGCCACGCTGCACTGTGGTGCCACACATGACCCCCGGGTTTCACTCCGCTA CGTTTGGAAGAAGGACAACGTGGCCCTGACTCCATCGAGCACGTCTAGGATCGTGGTGGAGAAGGACGGG TCCCTTCTCATCAGCCAGACGTGGTCAGGCGACATCGGTGACTACAGCTGCGAGATTGTTTCTGAAGGAG GGAATGACTCCAGGATGGCCCGGCTGGAAGTGATTGAACTGCCTCATTCACCTCAGAACCTCCTGGTCAG CCCTAATTCTTCCCACAGCCACGCCGTGGTGCTCTCTTGGGTCCGGCCCTTTGATGGAAACAGTCCTATT CTTTATTACATCGTGGAGCTCTCTGAAAACAACTCTCCATGGAAGGTGCATCTGTCAAACGTTGGCCCTG AGATGACAGGCGTCACCGTGAGTGGCCTGACTCCGGCTCGTACCTATCAATTCCGGGTGTGCGCGGTGAA TGAAGTGGGCAGGGGCCAGTACAGCGCCGAGACAAGCAGGTTGATGCTACCTGAAGAACCACCCAGTGCT CCCCCGAAAAATATAGTGGCCAGTGGGCGGACTAATCAGTCCATTATGGTCCAGTGGCAGCCACCCCCAG AAACAGAGCACAACGGGGTGTTGCGTGGATACATCCTCAGGTACCGCCTGGCTGGCCTTCCCGGAGAGTA CCAGCAGCGGAACATCACCAGCCCGGAGGTGAACTACTGCCTGGTGACAGACCTGATCATCTGGACACAG TATGAGATACAGGTGGCGGCGTACAACGGGGCCGGTCTGGGCGTCTTCAGCAGGGCAGTGACCGAGTACA CCTTGCAGGGAGTGCCCACCGCGCCCCCGCAGAACGTGCAGACGGAAGCCGTGAACTCCACCACCATTCA GTTCCTGTGGAACCCTCCGCCTCAGCAGTTTATCAATGGCATCAACCAGGGATACAAGCTTCTGGCATGG CCGGCAGATGCCCCCGAGGCTGTCACTGTGGTCACTATTGCCCCAGATTTCCACGGAGTCCACCATGGAC ACATAACGAACCTGAAGAAGTTTACCGCCTACTTCACTTCCGTTCTGTGCTTCACCACCCCTGGGGACGG GCCTCCCAGCACACCTCAGCTGGTCTGGACTCAGGAAGACAAACCAGGAGCTGTGGGACATCTGAGTTTC ACAGAGATCTTGGACACATCTCTCAAGGTCAGCTGGCAGGAGCCCCTGGAGAAAAATGGCATCATTACTG GCTATCAGATCTCTTGGGAAGTGTACGGCAGGAACGACTCTCGTCTCACGCACACCCTGAACAGCACGAC GCACGAGTACAAGATCCAAGGCCTCTCATCTCTCACCACCTACACCATCGACGTGGCCGCTGTGACTGCC GTGGGCACTGGCCTGGTGACTTCATCCACCATTTCTTCTGGAGTGCCCCCAGACCTTCCTGGTGCCCCAT CCAACCTGGTCATTTCCAACATCAGCCCTCGCTCCGCCACCCTTCAGTTCCGGCCAGGCTATGACGGGAA AACGTCCATCTCCAGGTGGATTGTTGAGGGGCAGGTGGGAGCTATCGGCGACGAGGAGGAGTGGGTCACC CTCTATGAAGAGGAGAATGAGCCTGATGCCCAGATGCTGGAGATCCCAAACCTCACACCCTACACTCACT ACAGATTTCGAATGAAGCAAGTGAACATTGTTGGGCCGAGCCCCTACAGTCCGTCTTCCCGGGTCATCCA GACCCTGCAGGCCCCACCCGACGTGGCTCCAACCAGCGTCACGGTCCGTACTGCCAGTGAGACCAGCCTG CGGCTTCGCTGGGTGCCCCTGCCGGATTCTCAGTACAACGGGAACCCCGAGTCCGTGGGCTACAGGATTA AGTACTGGCGCTCAGACCTCCAGTCCTCAGCAGTGGCCCAAGTCGTCAGTGACCGGCTGGAGAGAGAATT CACCATCGAGGAGCTGGAGGAGTGGATGGAATACGAGCTGCAGATGCAGGCCTTCAACGCCGTCGGGGCT GGGCCGTGGAGCGAGGTGGTGCGGGGCCGGACGCGGGAGTCAGTTCCTTCAGCCGCCCCTGAGAACGTGT CAGCCGAGGCTGTCAGCTCGACCCAGATTTTACTGACATGGACATCCGTGCCGGAACAGGACCAGAATGG GCTCATACTGGGCTACAAGATCCTGTTCCGGGCCAAAGACCTGGATCCCGAGCCCAGGAGCCACATCGTG CGAGGGAACCACACGCAGTCGGCCCTGCTGGCAGGCCTGCGCAAGTTCGTGCTCTACGAGCTCCAGGTGC TGGCGTTCACCCGCATCGGGAACGGGGTCCCCAGCACGCCCCTCATCCTGGAGCGCACCAAAGACGATGC CCCAGGCCCACCAGTGAGGCTCGTGTTCCCCGAAGTGAGACTCACCTCCGTGCGGATAGTGTGGCAACCT CCGGAGGAGCCCAACGGCATCATCCTGGGGTACCAGATTGCCTACCGCCTGGCCAGCAGCAGCCCCCACA CCTTCACCACCGTGGAGGTCGGCGCCACAGTGAGGCAGTTCACAGCCACCGACCTGGCCCCGGAGTCCGC ATACATCTTCAGGCTGTCCGCCAAGACGAGGCAGGGCTGGGGGGAGCCACTGGAGGCCACCGTCATCACC ACCGAGAAGAGAGAGCGGCCGGCACCCCCCAGAGAGCTCCTGGTGCCCCAGGCAGAAGTGACCGCACGCA GCCTCCGGCTCCAGTGGGTCCCGGGCAGCGACGGGGCCTCCCCCATCCGGTACTTCACCATGCAGGTGCG AGAGCTGCCTCGGGGTGAGTGGCAGACCTACTCCTCGTCCATCAGCCATGAGGCGACAGCATGCGTCGTT GACAGACTGAGGCCCTTCACCTCCTACAAGCTGCGCCTGAAAGCCACCAACGACATTGGGGACAGTGACT TCAGTTCAGAGACAGAGGCGGTGACCACGCTGCAGGATGTTCCAGGAGAGCCCCCGGGATCTGTCTCAGC GACGCCACACACCACGTCCTCTGTCCTGATACAGTGGCAGCCTCCGAGGGACGAAAGCCTGAATGGCCTT CTTCAGGGATACAGGATCTACTACAGGGAGCTGGAGTATGAAGCCGGGTCAGGCACTGAGGCCAAGACGC TCAAAAACCCTATAGCTTTACATGCTGAGCTCACAGCCCAAAGCAGCTTCAAGACGGTGAACAGCAGCTC CACATCGACGATGTGTGAACTAACACATTTAAAGAAGTACCGGCGCTATGAAGTAATAATGACCGCCTAT AACATCATCGGCGAGAGCCCAGCCAGCGCGCCCGTGGAGGTCTTTGTCGGCGAGGCTGCCCCGGCCATGG CCCCGCAGAACGTGCAGGTGACCCCACTCACGGCCAGCCAGCTGGAGGTCACGTGGGACCCACCACCCCC GGAGAGCCAGAATGGGAACATCCAAGGCTACAAGATTTACTACTGGGAGGCAGACAGCCAGAACGAAACG GAGAAAATGAAGGTCCTCTTCCTCCCCGAGCCCGTGGTGAGGCTGAAGAACCTGACCAGCCATACCAAGT ACCTGGTCAGCATATCAGCCTTCAACGCCGCCGGAGATGGACCTAAGAGTGACCCCCAGCAGGGGCGCAC CCACCAGGCCGCCCCTGGGGCCCCCAGCTTTCTGGCGTTCTCAGAAATAACCTCCACCACGCTCAACGTG TCCTGGGGCGAGCCTGCGGCGGCCAACGGCATCCTGCAGGGCTATCGGGTGGTGTACGAGCCCTTGGCCC CTGTACAAGGGGTGAGCAAGGTGGTGACCGTGGAAGTGAGAGGGAACTGGCAGCGCTGGCTGAAGGTGCG GGACCTCACCAAGGGAGTGACCTATTTCTTCCGTGTCCAAGCGCGGACCATCACCTACGGGCCCGAGCTC CAAGCCAATATCACAGCCGGGCCAGCCGAGGGATCCCCGGGCTCGCCTAGAGATGTCCTGGTCACCAAGT CCGCCTCTGAACTGACGCTGCAGTGGACTGAGGGACACTCTGGCGACACACCTACCACGGGCTATGTGAT CGAGGCCCGGCCCTCAGATGAAGGCTTATGGGACATGTTTGTGAAGGACATCCCGCGGAGCGCCACATCC TACACCCTCAGCCTGGATAAGCTCCGGCAAGGAGTGACTTACGAGTTCCGGGTGGTGGCTGTGAATGAGG CGGGCTACGGGGAGCCCAGCAACCCCTCCACGGCTGTGTCAGCTCAAGTGGAAGCCCCATTCTACGAGGA GTGGTGGTTCCTCCTGGTGATGGCTCTGTCCAGCCTGATCGTCATCCTGCTGGTGGTGTTCGCCCTCGTC CTGCACGGGCAGAATAAGAAGTATAAGAACTGCAGCACAGGAAAGGGGATCTCCACCATGGAGGAGTCTG TGACCCTGGACAACGGAGGATTTGCTGCCCTGGAGCTCAGCAGCCGCCACCTCAATGTCAAGAGCACCTT CTCCAAGAAGAACGGGACCAGGTCCCCACCCCGGCCTAGCCCCGGCGGCCTGCACTACTCAGACGAGGAC ATCTGCAACAAGTACAACGGCGCCGTGCTGACCGAGAGCGTGAGCCTCAAGGAGAAGTCGGCAGATGCAT CAGAATCTGAGGCCACGGACTCTGACTACGAGGACGCGCTGCCCAAGCACTCCTTCGTGAACCACTACAT GAGCGACCCCACCTACTACAACTCATGGAAGCGCAGGGCCCAGGGCCGCGCACCTGCGCCGCACAGGTAC GAGGCGGTGGCGGGCTCCGAGGCGGGCGCGCAGCTGCACCCGGTCATCACCACGCAGAGCGCGGGCGGCG TCTACACCCCCGCTGGCCCCGGCGCGCGAACTCCGCTCACCGGCTTCTCCTCCTTCGTGTGA
Translation (2213 aa): MARGARPSAAGGGGGGAEPPERAGPGRPRGSPPGRARPSLAPRPGPEPSRPRAAPETSGGDTAGAGRCGG RRAAKLGPGRRGWWALLALQLHLLRALAQDDVAPYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWMR DDSELTTYSSEYKYIIPSLQKLDAGFYRCVVRNRMGALLQRKSEVQVAYMGSFMDTDQRKTVSQGRAAIL NLLPITSYPRPQVTWFREGHKIIPSNRIAITLENQLVILATTTSDAGAYYVQAVNEKNGENKTSPFIHLS IARDVGTPETMAPTIVVPPGNRSVVAGSSETTLECIASARPVEDLSVTWKRNGVRITSGLHSFGRRLTIS NPTSADTGPYVCEAALPGSAFEPARATAFLFIIEPPYFTAEPESRISAEVEETVDIGCQAMGVPLPTLQW YKDAISISRLQNPRYKVLASGGLRIQKLRPEDSGIFQCFASNEGGEIQTHTYLDVTNIAPVFTQRPVDTT VTDGMTAILRCEVSGAPKPAITWKRENHILASGSVRIPRFMLLESGGLQIAPVFIQDAGNYTCYAANTEG SLNASATLTVWNRTSIVHPPEDHVVIKGTTATLHCGATHDPRVSLRYVWKKDNVALTPSSTSRIVVEKDG SLLISQTWSGDIGDYSCEIVSEGGNDSRMARLEVIELPHSPQNLLVSPNSSHSHAVVLSWVRPFDGNSPI LYYIVELSENNSPWKVHLSNVGPEMTGVTVSGLTPARTYQFRVCAVNEVGRGQYSAETSRLMLPEEPPSA PPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNITSPEVNYCLVTDLIIWTQ YEIQVAAYNGAGLGVFSRAVTEYTLQGVPTAPPQNVQTEAVNSTTIQFLWNPPPQQFINGINQGYKLLAW PADAPEAVTVVTIAPDFHGVHHGHITNLKKFTAYFTSVLCFTTPGDGPPSTPQLVWTQEDKPGAVGHLSF TEILDTSLKVSWQEPLEKNGIITGYQISWEVYGRNDSRLTHTLNSTTHEYKIQGLSSLTTYTIDVAAVTA VGTGLVTSSTISSGVPPDLPGAPSNLVISNISPRSATLQFRPGYDGKTSISRWIVEGQVGAIGDEEEWVT LYEEENEPDAQMLEIPNLTPYTHYRFRMKQVNIVGPSPYSPSSRVIQTLQAPPDVAPTSVTVRTASETSL RLRWVPLPDSQYNGNPESVGYRIKYWRSDLQSSAVAQVVSDRLEREFTIEELEEWMEYELQMQAFNAVGA GPWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWTSVPEQDQNGLILGYKILFRAKDLDPEPRSHIV RGNHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQP PEEPNGIILGYQIAYRLASSSPHTFTTVEVGATVRQFTATDLAPESAYIFRLSAKTRQGWGEPLEATVIT TEKRERPAPPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTMQVRELPRGEWQTYSSSISHEATACVV DRLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTSSVLIQWQPPRDESLNGL LQGYRIYYRELEYEAGSGTEAKTLKNPIALHAELTAQSSFKTVNSSSTSTMCELTHLKKYRRYEVIMTAY NIIGESPASAPVEVFVGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEADSQNET EKMKVLFLPEPVVRLKNLTSHTKYLVSISAFNAAGDGPKSDPQQGRTHQAAPGAPSFLAFSEITSTTLNV SWGEPAAANGILQGYRVVYEPLAPVQGVSKVVTVEVRGNWQRWLKVRDLTKGVTYFFRVQARTITYGPEL QANITAGPAEGSPGSPRDVLVTKSASELTLQWTEGHSGDTPTTGYVIEARPSDEGLWDMFVKDIPRSATS YTLSLDKLRQGVTYEFRVVAVNEAGYGEPSNPSTAVSAQVEAPFYEEWWFLLVMALSSLIVILLVVFALV LHGQNKKYKNCSTGKGISTMEESVTLDNGGFAALELSSRHLNVKSTFSKKNGTRSPPRPSPGGLHYSDED ICNKYNGAVLTESVSLKEKSADASESEATDSDYEDALPKHSFVNHYMSDPTYYNSWKRRAQGRAPAPHRY EAVAGSEAGAQLHPVITTQSAGGVYTPAGPGARTPLTGFSSFV
|