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Report for CCDS5354.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5354.1 Public Homo sapiens 7 CCZ1B 24 110 108 CCDS HistoryNCBI Gene:221960Re-query CCDS DB by CCDS ID:5354.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5354.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000316731.13 ENSP00000314544.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000316731.13Link to Ensembl Protein Viewer:ENSP00000314544.8Re-query CCDS DB by Nucleotide ID:ENST00000316731Re-query CCDS DB by Protein ID:ENSP00000314544
Original member Current member NCBI NM_198097.5 NP_932765.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198097.5Link to Protein Sequence:NP_932765.1Re-query CCDS DB by Nucleotide ID:NM_198097Re-query CCDS DB by Protein ID:NP_932765Link to BLAST:NP_932765.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_932765.1 482 P86790 482 100% 0 0

Chromosomal Locations for CCDS 5354.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 6799224 6799279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6800948 6801075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6801365 6801523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6804938 6805055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6806004 6806037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6811952 6812063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6812976 6813037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6814764 6814845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6819766 6819941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6822281 6822364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6823313 6823360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6824089 6824166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6824455 6824548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6824640 6824737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6826078 6826197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1449 nt):
ATGGCTGCAGCGGCGGCCGGGGCCGGGAGCGGGCCCTGGGCGGCCCAGGAGAAGCAGTTCCCGCCGGCGC
TGCTGAGTTTCTTCATCTACAACCCGCGCTTCGGGCCGCGCGAAGGACAGGAGGAAAATAAGATTTTATT
TTATCATCCAAATGAGGTAGAAAAGAATGAGAAGATTAGAAATGTCGGATTGTGTGAAGCTATTGTACAG
TTTACAAGGACATTTAGCCCATCAAAACCTGCAAAATCTTTACATACACAGAAGAACAGACAGTTCTTCA
ATGAACCAGAAGAAAATTTCTGGATGGTCATGGTTGTTCGGAATCCTATAATTGAAAAACAGAGTAAAGA
TGGAAAACCAGTTATTGAATATCAAGAGGAGGAGTTGTTGGACAAGGTTTATAGCTCGGTGCTGCGGCAG
TGCTACAGCATGTACAAGCTTTTTAATGGTACATTTCTGAAAGCCATGGAAGACGGAGGCGTCAAGCTTC
TGAAAGAAAGATTAGAGAAATTCTTCCATCGGTATTTGCAAACGCTACATTTGCAGTCATGTGACCTACT
TGACATTTTTGGTGGAATCAGCTTCTTCCCGTTGGATAAAATGACTTATTTGAAAATCCAGTCCTTTATT
AATAGAATGGAGGAAAGCCTGAATATAGTCAAATACACTGCTTTTCTCTATAACGATCAGCTCATCTGGA
GTGGATTAGAACAAGATGACATGAGAATTTTATACAAATACCTTACCACCTCCCTTTTCCCAAGGCACAT
CGAACCTGAGTTAGCAGGAAGGGATTCTCCAATAAGAGCAGAAATGCCAGGAAATCTTCAACACTATGGA
AGATTTCTTACCGGACCCTTGAACCTCAATGATCCAGATGCAAAATGCAGATTCCCCAAAATTTTTGTAA
ATACAGATGACACTTATGAAGAGCTCCATTTAATCGTTTATAAGGCCATGAGTGCGGCTGTGTGCTTTAT
GATCGACGCCTCTGTCCACCCAACGTTGGATTTTTGCCGAAGACTGGACAGCATCGTTGGGCCCCAGCTC
ACAGTGCTGGCCTCTGACATCTGTGAACAGTTTAACATCAACAAGAGGATGTCTGGGTCTGAGAAAGAAC
CCCAGTTTAAGTTTATCTACTTCAACCACATGAATCTCGCCGAGAAGAGCACAGTTCACATGAGGAAAAC
GCCCAGCGTGTCGCTCACTTCCGTGCACCCGGATTTAATGAAGATTCTCGGTGACATCAACAGTGACTTT
ACCAGAGTGGATGAAGATGAGGAGATCATTGTGAAGGCCATGAGTGATTACTGGGTTGTTGGAAAGAAGT
CTGATCGGCGGGAGCTCTATGTTATTTTGAATCAAAAAAATGCAAACCTGATTGAAGTAAATGAAGAGGT
CAAGAAACTTTGTGCAACGCAGTTCAACAACATCTTCTTCTTGGATTGA

Translation (482 aa):
MAAAAAGAGSGPWAAQEKQFPPALLSFFIYNPRFGPREGQEENKILFYHPNEVEKNEKIRNVGLCEAIVQ
FTRTFSPSKPAKSLHTQKNRQFFNEPEENFWMVMVVRNPIIEKQSKDGKPVIEYQEEELLDKVYSSVLRQ
CYSMYKLFNGTFLKAMEDGGVKLLKERLEKFFHRYLQTLHLQSCDLLDIFGGISFFPLDKMTYLKIQSFI
NRMEESLNIVKYTAFLYNDQLIWSGLEQDDMRILYKYLTTSLFPRHIEPELAGRDSPIRAEMPGNLQHYG
RFLTGPLNLNDPDAKCRFPKIFVNTDDTYEELHLIVYKAMSAAVCFMIDASVHPTLDFCRRLDSIVGPQL
TVLASDICEQFNINKRMSGSEKEPQFKFIYFNHMNLAEKSTVHMRKTPSVSLTSVHPDLMKILGDINSDF
TRVDEDEEIIVKAMSDYWVVGKKSDRRELYVILNQKNANLIEVNEEVKKLCATQFNNIFFLD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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