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Report for CCDS24303.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24303.1 Public Mus musculus 10 Or10p21 23 108 98 CCDS HistoryNCBI Gene:258861Re-query CCDS DB by CCDS ID:24303.1Re-query CCDS DB by GeneID:258861See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 24303.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000077460.4 ENSMUSP00000076671.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000077460.4Link to Ensembl Protein Viewer:ENSMUSP00000076671.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000077460Re-query CCDS DB by Protein ID:ENSMUSP00000076671
Original member Current member NCBI NM_146862.1 NP_667073.1 Accepted alive Link to Nucleotide Sequence:NM_146862.1Link to Protein Sequence:NP_667073.1Re-query CCDS DB by Nucleotide ID:NM_146862Re-query CCDS DB by Protein ID:NP_667073Link to BLAST:NP_667073.1

Chromosomal Locations for CCDS 24303.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 129011287 129012216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (930 nt):
ATGGGGGATGATAATGATACAGACATAACAGAGTTTATTTTACTGGGGTTCTCGGGTTATGGCTTTCTTC
AGGGCCATCTGTTCTGGGGTGTGCTGTGTATCTATGTTGTTACCTTGCTGGGCAACTCTCTGATCGTCCT
CCTTACGCTGGCGGACTCTGCGCTCCACTCTCCCATGTACTTCTTCCTGCGTCACTTCTCTGTGGTGGAG
ATCCTCTACACCACTACCATTGTGCCTCGGATGTTGGCTGACCTCCGGTCTTCCTGCCCCACCATCCCTC
TTGCCAGCTGCTTCACTCAGTTATATTTCTTTGCCCTTTTTGGCATTGCTGAATGCTGCTTGCTTACTGC
CATGGCCTATGACCGGTATGCTGCCATCTGCTGTCCACTGCATTATACTACCCTGATGAGCCAGGGAACC
TATACAGGCTTGGTGGGGGCCTCTTATCTTGCAGGTGTCATCTCAGGCACTACTCACTCCATCTTCATCT
TCACGTTGCCTTTCCGTGGGGCCAAAACCATCCATCACTTCCTGTGTGATATCCTGCCTGTGCTGAGACT
GGCTACTGCAAGCACTTTCTGGGGTGAAGTGGGGAACCTCTTTGTCACAATAACTTTTATCTTTGCCCCC
TTCTTATTGATTGTGGCCTCTTATGCCTGTATTCTTGCCACCATCCTTGGGGTGGCAACATCCCAGGGTC
GTCAAAAGCTCTTTTCTACGTGCTCCTCCCACTTGTTTGTGGTCATACTCTTTTTTGGGACTGGGACTGT
TGCCTATATGAGGCCTCAGGCTGATTCCTTTGGGGACACTGACCAAATTATCACCCTGTTCTACACAGTT
GTCACCCCCATGTGCAACCCTTTTGTTTACACTCTGAGGAACAAGGAGGTCACAGGGGCCATGAGGCGGC
TCGTGAAGAGATACTTTTAG

Translation (309 aa):
MGDDNDTDITEFILLGFSGYGFLQGHLFWGVLCIYVVTLLGNSLIVLLTLADSALHSPMYFFLRHFSVVE
ILYTTTIVPRMLADLRSSCPTIPLASCFTQLYFFALFGIAECCLLTAMAYDRYAAICCPLHYTTLMSQGT
YTGLVGASYLAGVISGTTHSIFIFTLPFRGAKTIHHFLCDILPVLRLATASTFWGEVGNLFVTITFIFAP
FLLIVASYACILATILGVATSQGRQKLFSTCSSHLFVVILFFGTGTVAYMRPQADSFGDTDQIITLFYTV
VTPMCNPFVYTLRNKEVTGAMRRLVKRYF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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