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Report for CCDS7767.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7767.1 Public Homo sapiens 11 DNHD1 24 110 108 CCDS HistoryNCBI Gene:144132Re-query CCDS DB by CCDS ID:7767.1Re-query CCDS DB by GeneID:144132See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7767.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354685.7 ENSP00000346716.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000354685.7Link to Ensembl Protein Viewer:ENSP00000346716.3Re-query CCDS DB by Nucleotide ID:ENST00000354685Re-query CCDS DB by Protein ID:ENSP00000346716
Original member Current member NCBI NM_173589.4 NP_775860.3 Accepted alive Link to Nucleotide Sequence:NM_173589.4Link to Protein Sequence:NP_775860.3Re-query CCDS DB by Nucleotide ID:NM_173589Re-query CCDS DB by Protein ID:NP_775860Link to BLAST:NP_775860.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775860.3 597 Q96M86-4 597 100% 0 0

Chromosomal Locations for CCDS 7767.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 6498216 6498961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6502753 6502926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6508880 6509083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6509162 6509272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6511273 6511429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6519600 6519854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6519965 6520111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1794 nt):
ATGGTCCCGGAGGAGAGGAGGGTAGGTTTGTCTTCTGATGAGACATCATCTGATTCCCTTAAGTCTTGGC
ACTCCATATGTGTCTTGGACAGCAAAGAACAGCCCTTGGCCTGCCAGCAGAAACAGAGGCAGTTCGTGAA
GCCAGTGACTGAGTCAGAGCAGCCCACAGTGCTGGAACTCCTGCTAGCTGAGCTCCGAACTCTGTTCTCA
GCTGTGTTGCAGGACAGTAGCCCTGCAGCTTGGCGCTATCTTCATGCAGTACTGGGTCTACTGCCTCCAT
ATCGTGAGTTGCTAGTTGGCCACCTTGATTTGCTGCCCTTCCTGGAGCAGCTGTACTGCTGGGCACCCTG
GGTCCAAACCCACCTCCATCTGGACCTGCTAGGTGCCATTGTCCAGGCCTTTCCTCCAGACAGCTCTTTG
TTAGACAGTGCTTCCCATGCTGACTGCTGTCCCCAGAAGCGGAGGCTCCATCACAGGCCCCCATGCCCAG
CTTGCCCTTTTGTGCAGGCCCAGTGGAGCAGGCAGCAAGTAAAGGAGGAGCTGGCCACCTGGCTGCGACC
ATTGACACTGCCTGAGCTACAGCGCTGCCTGGGCATTGTTGGTGCTCAGGTGGCCCTAGAAGAGGCTGTG
TGGCTGGATGGACTTAGTCTCCTTCCCTTGGCACTGGCAGCGGACATCCCTGTACGGTATGAAAGCAGTG
ACACTGACAATGCAGAGGTGGAGCCTGTTGGAAGAAAAGAGACCAGGTCTCAGCTTGACTATGAAGTTCC
CAGGGAAAAGGCCTTCCAAAAGAGCAGCACCGGCTTTTCACCTGAGACTTCCTTCCTGGATAGCCAGGTG
ATGACTGCTCTGAAGATGGAGAGATACCTGAAGAAGATCCACTTCCTCTATCTCAATGTGGCTCCCAGCC
GGTACTTTAGGCCTTACAGCCTGATGGTGGTGCCACCCGACAAGGTGAATCCCGAGCACTACATCTTCTC
TCCCTTTGGGATCTTGCATGTACATCCTGTGGAAGGTAGCGAGACGATGACACTGGGTACCTGGCACCAT
CACTGTGTTCTCTGGCAGCAGCTCCAGTTCATTCCATTCTTTAAGTATTGCCTCTTACGCAAGTCCTTTA
CCTGTTGGAAGAAGAATGTGAGATTACAGGGGCTGCATCGACTCCAGAAATTCCTAGAGAATCATCTGCT
CTTGGCTGTGCCCCACTTTGGAGCTGGGCTACTCCATATTAGCAGGCTTCTGCAGGAGCTACACTCTGTG
TCCTGGCTACCCCAGGAACTGGATCGGTGCTATGAGCTGCTGGACCTGCAGACGGCTCTAGCCGAGGAGA
AGCATAAGGCTCTACGGCTGCTCCATCGTTGCCTAAACCTCTGCACATCCATTCTTCGACTGGTTCACGA
GGACACATACCACATGCAACAGTGCCTACAGGAGCGAGTACAAAACTGTGACAGGATCAGGACAGGCCAA
GGCTCCATATACCTTCAGAGGGTACAGCACAAGCAACTGGAGCAGAAGCTGAAGCAAGCAGAGGCCTGGT
GGCTGCAGCTGGGAAAGTTTGCCCGCCTGGTTGACTACATGATTTGTCAGAGCCTCATTTCTGTCTTGGA
AGAGCAGATAACCTCTTTTGTGGCCAACATCCTTCAAGCCCCAAGGCAGAAACCCTTTCTCTCATCACAG
CTGGTCTTTGATGATCATGGTCAACTGTCTCATGTGCCCTGTGTTGAAAATATGATCCAGACTCTAACTG
GAGGCCTACAGTCTGTCAAGACCTCTGCCTTGCAGGTATTCTGA

Translation (597 aa):
MVPEERRVGLSSDETSSDSLKSWHSICVLDSKEQPLACQQKQRQFVKPVTESEQPTVLELLLAELRTLFS
AVLQDSSPAAWRYLHAVLGLLPPYRELLVGHLDLLPFLEQLYCWAPWVQTHLHLDLLGAIVQAFPPDSSL
LDSASHADCCPQKRRLHHRPPCPACPFVQAQWSRQQVKEELATWLRPLTLPELQRCLGIVGAQVALEEAV
WLDGLSLLPLALAADIPVRYESSDTDNAEVEPVGRKETRSQLDYEVPREKAFQKSSTGFSPETSFLDSQV
MTALKMERYLKKIHFLYLNVAPSRYFRPYSLMVVPPDKVNPEHYIFSPFGILHVHPVEGSETMTLGTWHH
HCVLWQQLQFIPFFKYCLLRKSFTCWKKNVRLQGLHRLQKFLENHLLLAVPHFGAGLLHISRLLQELHSV
SWLPQELDRCYELLDLQTALAEEKHKALRLLHRCLNLCTSILRLVHEDTYHMQQCLQERVQNCDRIRTGQ
GSIYLQRVQHKQLEQKLKQAEAWWLQLGKFARLVDYMICQSLISVLEEQITSFVANILQAPRQKPFLSSQ
LVFDDHGQLSHVPCVENMIQTLTGGLQSVKTSALQVF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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