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Report for CCDS8206.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8206.2 Public Homo sapiens 11 IL18BP 24 110 108 CCDS HistoryNCBI Gene:10068Re-query CCDS DB by CCDS ID:8206.2Re-query CCDS DB by GeneID:10068See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 8206.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000337131.9 ENSP00000338723.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000337131.9Link to Ensembl Protein Viewer:ENSP00000338723.5Re-query CCDS DB by Nucleotide ID:ENST00000337131Re-query CCDS DB by Protein ID:ENSP00000338723
Original member Current member EBI ENST00000393703.9 ENSP00000377306.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000393703.9Link to Ensembl Protein Viewer:ENSP00000377306.4Re-query CCDS DB by Nucleotide ID:ENST00000393703Re-query CCDS DB by Protein ID:ENSP00000377306
Original member Current member EBI ENST00000393705.8 ENSP00000377308.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393705.8Link to Ensembl Protein Viewer:ENSP00000377308.4Re-query CCDS DB by Nucleotide ID:ENST00000393705Re-query CCDS DB by Protein ID:ENSP00000377308
Original member Current member EBI ENST00000404792.5 ENSP00000384212.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000404792.5Link to Ensembl Protein Viewer:ENSP00000384212.1Re-query CCDS DB by Nucleotide ID:ENST00000404792Re-query CCDS DB by Protein ID:ENSP00000384212
Original member Current member EBI ENST00000534583.5 ENSP00000434376.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000534583.5Link to Ensembl Protein Viewer:ENSP00000434376.1Re-query CCDS DB by Nucleotide ID:ENST00000534583Re-query CCDS DB by Protein ID:ENSP00000434376
Original member Current member EBI ENST00000698837.1 ENSP00000513973.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000698837.1Link to Ensembl Protein Viewer:ENSP00000513973.1Re-query CCDS DB by Nucleotide ID:ENST00000698837Re-query CCDS DB by Protein ID:ENSP00000513973
Original member Current member EBI ENST00000698838.1 ENSP00000513974.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000698838.1Link to Ensembl Protein Viewer:ENSP00000513974.1Re-query CCDS DB by Nucleotide ID:ENST00000698838Re-query CCDS DB by Protein ID:ENSP00000513974
Original member Current member EBI ENST00000698839.1 ENSP00000513975.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000698839.1Link to Ensembl Protein Viewer:ENSP00000513975.1Re-query CCDS DB by Nucleotide ID:ENST00000698839Re-query CCDS DB by Protein ID:ENSP00000513975
Original member Current member EBI ENST00000698840.1 ENSP00000513976.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000698840.1Link to Ensembl Protein Viewer:ENSP00000513976.1Re-query CCDS DB by Nucleotide ID:ENST00000698840Re-query CCDS DB by Protein ID:ENSP00000513976
Original member Current member NCBI NM_001039659.2 NP_001034748.1 Accepted alive Link to Nucleotide Sequence:NM_001039659.2Link to Protein Sequence:NP_001034748.1Re-query CCDS DB by Nucleotide ID:NM_001039659Re-query CCDS DB by Protein ID:NP_001034748Link to BLAST:NP_001034748.1
Original member Current member NCBI NM_001039660.2 NP_001034749.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001039660.2Link to Protein Sequence:NP_001034749.1Re-query CCDS DB by Nucleotide ID:NM_001039660Re-query CCDS DB by Protein ID:NP_001034749Link to BLAST:NP_001034749.1
Original member Current member NCBI NM_001145057.1 NP_001138529.1 Accepted alive Link to Nucleotide Sequence:NM_001145057.1Link to Protein Sequence:NP_001138529.1Re-query CCDS DB by Nucleotide ID:NM_001145057Re-query CCDS DB by Protein ID:NP_001138529Link to BLAST:NP_001138529.1
Original member Current member NCBI NM_173042.2 NP_766630.2 Accepted alive Link to Nucleotide Sequence:NM_173042.2Link to Protein Sequence:NP_766630.2Re-query CCDS DB by Nucleotide ID:NM_173042Re-query CCDS DB by Protein ID:NP_766630Link to BLAST:NP_766630.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001034748.1 194 O95998-2 194 100% 0 0
NP_001034749.1 194 O95998-2 194 100% 0 0
NP_001138529.1 194 O95998-2 194 100% 0 0
NP_766630.2 194 O95998-2 194 100% 0 0

Chromosomal Locations for CCDS 8206.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 71999985 72000012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72000351 72000557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72001201 72001324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72001405 72001552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72001784 72001861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (585 nt):
ATGACCATGAGACACAACTGGACACCAGACCTCAGCCCTTTGTGGGTCCTGCTCCTGTGTGCCCACGTCG
TCACTCTCCTGGTCAGAGCCACACCTGTCTCGCAGACCACCACAGCTGCCACTGCCTCAGTTAGAAGCAC
AAAGGACCCCTGCCCCTCCCAGCCCCCAGTGTTCCCAGCAGCTAAGCAGTGTCCAGCATTGGAAGTGACC
TGGCCAGAGGTGGAAGTGCCACTGAATGGAACGCTGAGCTTATCCTGTGTGGCCTGCAGCCGCTTCCCCA
ACTTCAGCATCCTCTACTGGCTGGGCAATGGTTCCTTCATTGAGCACCTCCCAGGCCGACTGTGGGAGGG
GAGCACCAGCCGGGAACGTGGGAGCACAGGTACGCAGCTGTGCAAGGCCTTGGTGCTGGAGCAGCTGACC
CCTGCCCTGCACAGCACCAACTTCTCCTGTGTGCTCGTGGACCCTGAACAGGTTGTCCAGCGTCACGTCG
TCCTGGCCCAGCTCTGGGCTGGGCTGAGGGCAACCTTGCCCCCCACCCAAGAAGCCCTGCCCTCCAGCCA
CAGCAGTCCACAGCAGCAGGGTTAA

Translation (194 aa):
MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALEVT
WPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTSRERGSTGTQLCKALVLEQLT
PALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQEALPSSHSSPQQQG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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