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Report for CCDS7457.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7457.1 Public Homo sapiens 10 RRP12 24 110 108 CCDS HistoryNCBI Gene:23223Re-query CCDS DB by CCDS ID:7457.1Re-query CCDS DB by GeneID:23223See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7457.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370992.9 ENSP00000360031.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370992.9Link to Ensembl Protein Viewer:ENSP00000360031.4Re-query CCDS DB by Nucleotide ID:ENST00000370992Re-query CCDS DB by Protein ID:ENSP00000360031
Original member Current member EBI ENST00000536831.5 ENSP00000446184.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000536831.5Link to Ensembl Protein Viewer:ENSP00000446184.2Re-query CCDS DB by Nucleotide ID:ENST00000536831Re-query CCDS DB by Protein ID:ENSP00000446184
Original member Current member NCBI NM_015179.4 NP_055994.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015179.4Link to Protein Sequence:NP_055994.2Re-query CCDS DB by Nucleotide ID:NM_015179Re-query CCDS DB by Protein ID:NP_055994Link to BLAST:NP_055994.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055994.2 1297 Q5JTH9-1 1297 100% 0 0

Chromosomal Locations for CCDS 7457.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 97357094 97357196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97358537 97358619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97358943 97359010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97360546 97360618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97363854 97363903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97366108 97366233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97366446 97366621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97366742 97366909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97367041 97367132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97369425 97369582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97370167 97370274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97370455 97370560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97370716 97370796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97370923 97371081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97372073 97372166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97372736 97372803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97373046 97373200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97373575 97373737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97373830 97373894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97379293 97379414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97379628 97379770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97380799 97380913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97381386 97381483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97381715 97381826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97385166 97385257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97385895 97385993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97388252 97388379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97388489 97388624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97390423 97390539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97390739 97390844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97393684 97393760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97396218 97396301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97400305 97400534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97401093 97401231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3894 nt):
ATGGGTCGCTCGGGAAAGTTGCCTTCTGGTGTCTCAGCTAAGTTGAAGCGCTGGAAGAAAGGCCACAGCA
GCGACAGCAACCCCGCCATCTGCCGCCACCGTCAGGCCGCCCGCAGCCGCTTCTTCAGCCGGCCGTCAGG
AAGGAGTGACCTGACAGTCGATGCTGTGAAGTTACATAATGAGCTGCAGTCAGGGTCCTTGCGCTTGGGC
AAAAGCGAAGCCCCGGAGACGCCCATGGAAGAAGAGGCGGAGCTGGTTCTCACCGAGAAGTCCTCGGGTA
CCTTCCTGAGTGGCCTTTCCGACTGCACAAACGTCACCTTCAGCAAAGTACAGCGCTTCTGGGAGTCCAA
CTCGGCTGCCCACAAGGAGATCTGTGCTGTTCTGGCTGCTGTCACTGAGGTGATTCGCTCCCAGGGAGGG
AAGGAGACGGAGACTGAGTACTTCGCTGCTCTGATGACAACAATGGAAGCAGTGGAGTCCCCGGAGTCCC
TGGCCGCCGTTGCTTACCTGCTGAACCTTGTCCTGAAGCGTGTTCCCAGCCCTGTGCTTATTAAGAAGTT
CTCTGATACCTCCAAAGCCTTCATGGATATCATGTCAGCTCAGGCCAGCAGCGGCTCCACCTCTGTCCTC
CGATGGGTCCTTTCCTGCCTGGCCACCCTTCTGCGGAAGCAAGACCTGGAGGCCTGGGGCTACCCCGTGA
CCCTTCAGGTGTACCATGGGCTGCTGAGCTTCACGGTGCATCCCAAGCCCAAGATCCGGAAGGCTGCCCA
GCATGGAGTATGCTCAGTCCTCAAGGGCAGTGAATTCATGTTTGAAAAGGCCCCTGCCCATCATCCTGCT
GCCATTTCCACTGCCAAGTTCTGCATCCAGGAGATTGAGAAGTCTGGAGGCTCCAAGGAGGCCACCACCA
CGCTGCACATGCTGACGCTGCTGAAGGACCTGCTGCCCTGCTTCCCGGAAGGCCTGGTGAAGAGCTGCAG
TGAGACTCTCCTCAGGGTCATGACCTTGAGCCATGTGCTGGTGACAGCCTGTGCCATGCAGGCCTTTCAC
AGCCTCTTCCACGCCAGGCCTGGCCTGAGCACCCTGTCAGCAGAGCTCAACGCCCAGATCATCACGGCCC
TGTACGACTATGTTCCCAGTGAGAATGATTTACAACCCCTGCTAGCCTGGCTTAAGGTCATGGAGAAAGC
CCACATCAACCTGGTGAGGTTGCAGTGGGACCTGGGGCTAGGCCACCTCCCTCGCTTTTTTGGAACTGCG
GTGACCTGCCTCCTTTCCCCACACTCGCAAGTGCTGACTGCTGCTACGCAGAGCCTCAAGGAGATCCTGA
AGGAATGCGTGGCTCCCCACATGGCTGACATTGGCTCCGTGACCTCCTCGGCCTCAGGCCCTGCCCAATC
TGTTGCCAAGATGTTCAGGGCAGTGGAGGAGGGCCTGACGTACAAATTCCATGCGGCCTGGAGCTCCGTG
TTGCAGCTGCTGTGTGTCTTCTTCGAGGCGTGTGGGAGACAGGCCCACCCTGTGATGAGGAAGTGCCTCC
AGTCCCTGTGTGACCTGCGCCTCTCCCCTCATTTCCCCCACACGGCGGCTCTTGACCAGGCAGTGGGGGC
TGCGGTGACCAGTATGGGACCTGAGGTGGTGCTGCAGGCTGTGCCTTTGGAAATTGATGGCTCTGAGGAG
ACTCTGGATTTCCCACGGAGCTGGCTGCTGCCTGTCATCCGAGACCATGTTCAGGAAACGCGACTTGGTT
TTTTCACCACCTACTTCTTGCCCCTGGCTAACACCCTGAAGAGCAAAGCCATGGACCTGGCTCAGGCAGG
CAGCACAGTGGAATCTAAGATCTACGACACACTCCAGTGGCAGATGTGGACACTCCTGCCTGGGTTCTGC
ACAAGGCCTACAGATGTGGCCATCTCCTTCAAAGGGCTGGCACGGACGCTGGGCATGGCCATCAGCGAGC
GTCCAGACCTGAGGGTCACCGTGTGCCAGGCCCTGCGCACCCTCATCACCAAGGGCTGCCAGGCAGAGGC
TGACCGTGCTGAAGTGAGTCGCTTTGCCAAGAACTTTCTGCCGATCCTCTTCAACCTGTATGGGCAGCCC
GTGGCAGCCGGGGACACTCCAGCCCCTCGCCGGGCTGTGCTGGAAACCATCAGAACTTACCTCACCATCA
CTGACACTCAGTTGGTGAACAGTCTCCTGGAAAAAGCCAGTGAGAAGGTGCTCGACCCTGCCAGCTCTGA
CTTTACCAGATTGTCTGTCCTGGACCTGGTCGTGGCCTTGGCTCCGTGTGCTGACGAAGCTGCCATCAGT
AAGCTATACTCCACCATCCGGCCCTACCTAGAGAGCAAGGCCCACGGGGTGCAGAAGAAGGCCTACCGAG
TGCTGGAGGAGGTGTGTGCCAGTCCTCAGGGCCCCGGGGCCCTCTTCGTGCAGAGCCACCTGGAGGACCT
GAAGAAGACACTGCTGGACTCGCTGCGGAGCACCTCCTCACCCGCCAAGAGGCCCCGTTTGAAGTGCCTC
CTACACATCGTGAGGAAGCTCTCAGCTGAACACAAGGAGTTCATCACTGCCCTCATCCCAGAGGTGATCC
TGTGCACCAAGGAGGTGTCGGTGGGCGCACGGAAGAACGCTTTTGCACTGCTCGTGGAGATGGGCCATGC
TTTCCTAAGGTTTGGCTCGAACCAGGAAGAGGCCCTGCAGTGCTACCTCGTCCTGATCTACCCTGGCCTG
GTGGGCGCGGTGACCATGGTCAGCTGCAGCATCCTGGCCCTGACCCACCTCCTTTTCGAGTTTAAAGGTC
TGATGGGGACCAGTACAGTGGAGCAGCTGCTGGAGAATGTGTGCCTGCTTCTGGCCTCCCGCACCCGTGA
CGTGGTCAAGTCTGCACTGGGCTTCATCAAGGTGGCAGTGACTGTCATGGACGTGGCGCACCTGGCCAAA
CATGTGCAGCTGGTGATGGAAGCCATTGGGAAGCTTTCAGATGACATGCGGCGGCACTTCCGCATGAAGC
TTCGGAACCTGTTCACCAAGTTCATCCGCAAGTTTGGATTTGAGCTGGTGAAAAGGCTGTTGCCCGAGGA
GTACCACAGAGTCCTGGTCAACATCCGGAAAGCTGAGGCCCGGGCCAAGAGGCACCGAGCCCTGAGCCAG
GCTGCCGTGGAGGAGGAAGAAGAGGAGGAGGAGGAGGAGGAGCCCGCCCAGGGCAAAGGTGACAGCATTG
AGGAGATTTTAGCTGACTCAGAGGACGAGGAGGACAATGAGGAGGAGGAAAGAAGCCGAGGCAAGGAGCA
GCGGAAGCTGGCACGACAGAGGAGCCGGGCATGGCTGAAAGAGGGCGGTGGGGACGAGCCCCTCAACTTC
CTGGATCCCAAGGTGGCCCAACGAGTCCTGGCCACGCAGCCAGGGCCAGGCCGGGGCAGGAAGAAGGACC
ACGGCTTCAAGGTGAGCGCCGATGGCCGGCTGATCATAAGGGAGGAGGCAGACGGCAACAAGATGGAGGA
AGAGGAAGGTGCCAAAGGCGAAGATGAAGAGATGGCTGACCCAATGGAAGATGTGATCATCAGGAATAAA
AAGCACCAGAAGCTCAAGCACCAGAAAGAGGCTGAGGAGGAGGAGCTGGAGATACCCCCTCAGTACCAAG
CTGGAGGCTCTGGCATTCATCGCCCTGTGGCCAAGAAGGCTATGCCTGGGGCTGAATACAAGGCCAAGAA
AGCAAAAGGTGATGTGAAGAAGAAAGGCCGGCCGGATCCCTATGCCTACATCCCCCTCAACAGAAGCAAG
CTCAACCGCAGGAAGAAGATGAAGCTGCAGGGACAGTTCAAAGGCCTGGTGAAGGCTGCCCGGCGAGGTT
CCCAGGTGGGACACAAAAACCGCAGAAAGGATCGTCGACCCTGA

Translation (1297 aa):
MGRSGKLPSGVSAKLKRWKKGHSSDSNPAICRHRQAARSRFFSRPSGRSDLTVDAVKLHNELQSGSLRLG
KSEAPETPMEEEAELVLTEKSSGTFLSGLSDCTNVTFSKVQRFWESNSAAHKEICAVLAAVTEVIRSQGG
KETETEYFAALMTTMEAVESPESLAAVAYLLNLVLKRVPSPVLIKKFSDTSKAFMDIMSAQASSGSTSVL
RWVLSCLATLLRKQDLEAWGYPVTLQVYHGLLSFTVHPKPKIRKAAQHGVCSVLKGSEFMFEKAPAHHPA
AISTAKFCIQEIEKSGGSKEATTTLHMLTLLKDLLPCFPEGLVKSCSETLLRVMTLSHVLVTACAMQAFH
SLFHARPGLSTLSAELNAQIITALYDYVPSENDLQPLLAWLKVMEKAHINLVRLQWDLGLGHLPRFFGTA
VTCLLSPHSQVLTAATQSLKEILKECVAPHMADIGSVTSSASGPAQSVAKMFRAVEEGLTYKFHAAWSSV
LQLLCVFFEACGRQAHPVMRKCLQSLCDLRLSPHFPHTAALDQAVGAAVTSMGPEVVLQAVPLEIDGSEE
TLDFPRSWLLPVIRDHVQETRLGFFTTYFLPLANTLKSKAMDLAQAGSTVESKIYDTLQWQMWTLLPGFC
TRPTDVAISFKGLARTLGMAISERPDLRVTVCQALRTLITKGCQAEADRAEVSRFAKNFLPILFNLYGQP
VAAGDTPAPRRAVLETIRTYLTITDTQLVNSLLEKASEKVLDPASSDFTRLSVLDLVVALAPCADEAAIS
KLYSTIRPYLESKAHGVQKKAYRVLEEVCASPQGPGALFVQSHLEDLKKTLLDSLRSTSSPAKRPRLKCL
LHIVRKLSAEHKEFITALIPEVILCTKEVSVGARKNAFALLVEMGHAFLRFGSNQEEALQCYLVLIYPGL
VGAVTMVSCSILALTHLLFEFKGLMGTSTVEQLLENVCLLLASRTRDVVKSALGFIKVAVTVMDVAHLAK
HVQLVMEAIGKLSDDMRRHFRMKLRNLFTKFIRKFGFELVKRLLPEEYHRVLVNIRKAEARAKRHRALSQ
AAVEEEEEEEEEEEPAQGKGDSIEEILADSEDEEDNEEEERSRGKEQRKLARQRSRAWLKEGGGDEPLNF
LDPKVAQRVLATQPGPGRGRKKDHGFKVSADGRLIIREEADGNKMEEEEGAKGEDEEMADPMEDVIIRNK
KHQKLKHQKEAEEEELEIPPQYQAGGSGIHRPVAKKAMPGAEYKAKKAKGDVKKKGRPDPYAYIPLNRSK
LNRRKKMKLQGQFKGLVKAARRGSQVGHKNRRKDRRP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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