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Report for CCDS44467.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44467.1 Public Homo sapiens 10 RRP12 24 110 108 CCDS HistoryNCBI Gene:23223Re-query CCDS DB by CCDS ID:44467.1Re-query CCDS DB by GeneID:23223See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 44467.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000414986.5 ENSP00000414863.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000414986.5Link to Ensembl Protein Viewer:ENSP00000414863.1Re-query CCDS DB by Nucleotide ID:ENST00000414986Re-query CCDS DB by Protein ID:ENSP00000414863
Original member Current member NCBI NM_001145114.1 NP_001138586.1 Accepted alive Link to Nucleotide Sequence:NM_001145114.1Link to Protein Sequence:NP_001138586.1Re-query CCDS DB by Nucleotide ID:NM_001145114Re-query CCDS DB by Protein ID:NP_001138586Link to BLAST:NP_001138586.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138586.1 1236 Q5JTH9-3 1236 100% 0 0

Chromosomal Locations for CCDS 44467.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 97357094 97357196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97358537 97358619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97358943 97359010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97360546 97360618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97363854 97363903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97366108 97366233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97366446 97366621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97366742 97366909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97367041 97367132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97369425 97369582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97370167 97370274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97370455 97370560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97370716 97370796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97370923 97371081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97372073 97372166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97372736 97372803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97373046 97373200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97373575 97373737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97373830 97373894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97379293 97379414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97379628 97379770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97380799 97380913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97381386 97381483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97381715 97381826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97385166 97385257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97385895 97385993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97388252 97388379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97388489 97388624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97390423 97390539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97396218 97396301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97400305 97400534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97401093 97401231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3711 nt):
ATGGGTCGCTCGGGAAAGTTGCCTTCTGGTGTCTCAGCTAAGTTGAAGCGCTGGAAGAAAGGCCACAGCA
GCGACAGCAACCCCGCCATCTGCCGCCACCGTCAGGCCGCCCGCAGCCGCTTCTTCAGCCGGCCGTCAGG
AAGGAGTGACCTGACAGTCGATGCTGTGAAGTTACATAATGAGCTGCAGTCAGGGTCCTTGCGCTTGGGC
AAAAGCGAAGCCCCGGAGACGCCCATGGAAGAAGAGGCGGAGCTGGTTCTCACCGAGAAGTCCTCGGGTA
CCTTCCTGAGTGGCCTTTCCGACTGCACAAACGTCACCTTCAGCAAAGTACAGCGCTTCTGGGAGTCCAA
CTCGGCTGCCCACAAGGAGATCTGTGCTGTTCTGGCTGCTGTCACTGAGGTGATTCGCTCCCAGGGAGGG
AAGGAGACGGAGACTGAGTACTTCGCTGCTCTGGTCCTTTCCTGCCTGGCCACCCTTCTGCGGAAGCAAG
ACCTGGAGGCCTGGGGCTACCCCGTGACCCTTCAGGTGTACCATGGGCTGCTGAGCTTCACGGTGCATCC
CAAGCCCAAGATCCGGAAGGCTGCCCAGCATGGAGTATGCTCAGTCCTCAAGGGCAGTGAATTCATGTTT
GAAAAGGCCCCTGCCCATCATCCTGCTGCCATTTCCACTGCCAAGTTCTGCATCCAGGAGATTGAGAAGT
CTGGAGGCTCCAAGGAGGCCACCACCACGCTGCACATGCTGACGCTGCTGAAGGACCTGCTGCCCTGCTT
CCCGGAAGGCCTGGTGAAGAGCTGCAGTGAGACTCTCCTCAGGGTCATGACCTTGAGCCATGTGCTGGTG
ACAGCCTGTGCCATGCAGGCCTTTCACAGCCTCTTCCACGCCAGGCCTGGCCTGAGCACCCTGTCAGCAG
AGCTCAACGCCCAGATCATCACGGCCCTGTACGACTATGTTCCCAGTGAGAATGATTTACAACCCCTGCT
AGCCTGGCTTAAGGTCATGGAGAAAGCCCACATCAACCTGGTGAGGTTGCAGTGGGACCTGGGGCTAGGC
CACCTCCCTCGCTTTTTTGGAACTGCGGTGACCTGCCTCCTTTCCCCACACTCGCAAGTGCTGACTGCTG
CTACGCAGAGCCTCAAGGAGATCCTGAAGGAATGCGTGGCTCCCCACATGGCTGACATTGGCTCCGTGAC
CTCCTCGGCCTCAGGCCCTGCCCAATCTGTTGCCAAGATGTTCAGGGCAGTGGAGGAGGGCCTGACGTAC
AAATTCCATGCGGCCTGGAGCTCCGTGTTGCAGCTGCTGTGTGTCTTCTTCGAGGCGTGTGGGAGACAGG
CCCACCCTGTGATGAGGAAGTGCCTCCAGTCCCTGTGTGACCTGCGCCTCTCCCCTCATTTCCCCCACAC
GGCGGCTCTTGACCAGGCAGTGGGGGCTGCGGTGACCAGTATGGGACCTGAGGTGGTGCTGCAGGCTGTG
CCTTTGGAAATTGATGGCTCTGAGGAGACTCTGGATTTCCCACGGAGCTGGCTGCTGCCTGTCATCCGAG
ACCATGTTCAGGAAACGCGACTTGGTTTTTTCACCACCTACTTCTTGCCCCTGGCTAACACCCTGAAGAG
CAAAGCCATGGACCTGGCTCAGGCAGGCAGCACAGTGGAATCTAAGATCTACGACACACTCCAGTGGCAG
ATGTGGACACTCCTGCCTGGGTTCTGCACAAGGCCTACAGATGTGGCCATCTCCTTCAAAGGGCTGGCAC
GGACGCTGGGCATGGCCATCAGCGAGCGTCCAGACCTGAGGGTCACCGTGTGCCAGGCCCTGCGCACCCT
CATCACCAAGGGCTGCCAGGCAGAGGCTGACCGTGCTGAAGTGAGTCGCTTTGCCAAGAACTTTCTGCCG
ATCCTCTTCAACCTGTATGGGCAGCCCGTGGCAGCCGGGGACACTCCAGCCCCTCGCCGGGCTGTGCTGG
AAACCATCAGAACTTACCTCACCATCACTGACACTCAGTTGGTGAACAGTCTCCTGGAAAAAGCCAGTGA
GAAGGTGCTCGACCCTGCCAGCTCTGACTTTACCAGATTGTCTGTCCTGGACCTGGTCGTGGCCTTGGCT
CCGTGTGCTGACGAAGCTGCCATCAGTAAGCTATACTCCACCATCCGGCCCTACCTAGAGAGCAAGGCCC
ACGGGGTGCAGAAGAAGGCCTACCGAGTGCTGGAGGAGGTGTGTGCCAGTCCTCAGGGCCCCGGGGCCCT
CTTCGTGCAGAGCCACCTGGAGGACCTGAAGAAGACACTGCTGGACTCGCTGCGGAGCACCTCCTCACCC
GCCAAGAGGCCCCGTTTGAAGTGCCTCCTACACATCGTGAGGAAGCTCTCAGCTGAACACAAGGAGTTCA
TCACTGCCCTCATCCCAGAGGTGATCCTGTGCACCAAGGAGGTGTCGGTGGGCGCACGGAAGAACGCTTT
TGCACTGCTCGTGGAGATGGGCCATGCTTTCCTAAGGTTTGGCTCGAACCAGGAAGAGGCCCTGCAGTGC
TACCTCGTCCTGATCTACCCTGGCCTGGTGGGCGCGGTGACCATGGTCAGCTGCAGCATCCTGGCCCTGA
CCCACCTCCTTTTCGAGTTTAAAGGTCTGATGGGGACCAGTACAGTGGAGCAGCTGCTGGAGAATGTGTG
CCTGCTTCTGGCCTCCCGCACCCGTGACGTGGTCAAGTCTGCACTGGGCTTCATCAAGGTGGCAGTGACT
GTCATGGACGTGGCGCACCTGGCCAAACATGTGCAGCTGGTGATGGAAGCCATTGGGAAGCTTTCAGATG
ACATGCGGCGGCACTTCCGCATGAAGCTTCGGAACCTGTTCACCAAGTTCATCCGCAAGTTTGGATTTGA
GCTGGTGAAAAGGCTGTTGCCCGAGGAGTACCACAGAGTCCTGGTCAACATCCGGAAAGCTGAGGCCCGG
GCCAAGAGGCACCGAGCCCTGAGCCAGGCTGCCGTGGAGGAGGAAGAAGAGGAGGAGGAGGAGGAGGAGC
CCGCCCAGGGCAAAGGTGACAGCATTGAGGAGATTTTAGCTGACTCAGAGGACGAGGAGGACAATGAGGA
GGAGGAAAGAAGCCGAGGCAAGGAGCAGCGGAAGCTGGCACGACAGAGGAGCCGGGCATGGCTGAAAGAG
GGCGGTGGGGACGAGCCCCTCAACTTCCTGGATCCCAAGGTGGCCCAACGAGTCCTGGCCACGCAGCCAG
GGCCAGGCCGGGGCAGGAAGAAGGACCACGGCTTCAAGGTGAGCGCCGATGGCCGGCTGATCATAAGGGA
GGAGGCAGACGGCAACAAGATGGAGGAAGAGGAAGGTGCCAAAGGCGAAGATGAAGAGATGGCTGACCCA
ATGGAAGATGTGATCATCAGGAATAAAAAGCACCAGAAGCTCAAGCACCAGAAAGAGGCTGAGGAGGAGG
AGCTGGAGATACCCCCTCAGTACCAAGCTGGAGGCTCTGGCATTCATCGCCCTGTGGCCAAGAAGGCTAT
GCCTGGGGCTGAATACAAGGCCAAGAAAGCAAAAGGTGATGTGAAGAAGAAAGGCCGGCCGGATCCCTAT
GCCTACATCCCCCTCAACAGAAGCAAGCTCAACCGCAGGAAGAAGATGAAGCTGCAGGGACAGTTCAAAG
GCCTGGTGAAGGCTGCCCGGCGAGGTTCCCAGGTGGGACACAAAAACCGCAGAAAGGATCGTCGACCCTG
A

Translation (1236 aa):
MGRSGKLPSGVSAKLKRWKKGHSSDSNPAICRHRQAARSRFFSRPSGRSDLTVDAVKLHNELQSGSLRLG
KSEAPETPMEEEAELVLTEKSSGTFLSGLSDCTNVTFSKVQRFWESNSAAHKEICAVLAAVTEVIRSQGG
KETETEYFAALVLSCLATLLRKQDLEAWGYPVTLQVYHGLLSFTVHPKPKIRKAAQHGVCSVLKGSEFMF
EKAPAHHPAAISTAKFCIQEIEKSGGSKEATTTLHMLTLLKDLLPCFPEGLVKSCSETLLRVMTLSHVLV
TACAMQAFHSLFHARPGLSTLSAELNAQIITALYDYVPSENDLQPLLAWLKVMEKAHINLVRLQWDLGLG
HLPRFFGTAVTCLLSPHSQVLTAATQSLKEILKECVAPHMADIGSVTSSASGPAQSVAKMFRAVEEGLTY
KFHAAWSSVLQLLCVFFEACGRQAHPVMRKCLQSLCDLRLSPHFPHTAALDQAVGAAVTSMGPEVVLQAV
PLEIDGSEETLDFPRSWLLPVIRDHVQETRLGFFTTYFLPLANTLKSKAMDLAQAGSTVESKIYDTLQWQ
MWTLLPGFCTRPTDVAISFKGLARTLGMAISERPDLRVTVCQALRTLITKGCQAEADRAEVSRFAKNFLP
ILFNLYGQPVAAGDTPAPRRAVLETIRTYLTITDTQLVNSLLEKASEKVLDPASSDFTRLSVLDLVVALA
PCADEAAISKLYSTIRPYLESKAHGVQKKAYRVLEEVCASPQGPGALFVQSHLEDLKKTLLDSLRSTSSP
AKRPRLKCLLHIVRKLSAEHKEFITALIPEVILCTKEVSVGARKNAFALLVEMGHAFLRFGSNQEEALQC
YLVLIYPGLVGAVTMVSCSILALTHLLFEFKGLMGTSTVEQLLENVCLLLASRTRDVVKSALGFIKVAVT
VMDVAHLAKHVQLVMEAIGKLSDDMRRHFRMKLRNLFTKFIRKFGFELVKRLLPEEYHRVLVNIRKAEAR
AKRHRALSQAAVEEEEEEEEEEEPAQGKGDSIEEILADSEDEEDNEEEERSRGKEQRKLARQRSRAWLKE
GGGDEPLNFLDPKVAQRVLATQPGPGRGRKKDHGFKVSADGRLIIREEADGNKMEEEEGAKGEDEEMADP
MEDVIIRNKKHQKLKHQKEAEEEELEIPPQYQAGGSGIHRPVAKKAMPGAEYKAKKAKGDVKKKGRPDPY
AYIPLNRSKLNRRKKMKLQGQFKGLVKAARRGSQVGHKNRRKDRRP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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