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Report for CCDS34920.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34920.2 Public Homo sapiens 8 TMEM64 24 110 108 CCDS HistoryNCBI Gene:169200Re-query CCDS DB by CCDS ID:34920.2Re-query CCDS DB by GeneID:169200See the combined annotation on chromosome 8 in Sequence Viewer

Public Note for CCDS 34920.1
The coding region has been updated to extend the N-terminus to one that is more supported by available transcript and conservation data.

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 34920.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000458549.7 ENSP00000414786.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000458549.7Link to Ensembl Protein Viewer:ENSP00000414786.2Re-query CCDS DB by Nucleotide ID:ENST00000458549Re-query CCDS DB by Protein ID:ENSP00000414786
Original member Current member NCBI NM_001008495.4 NP_001008495.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001008495.4Link to Protein Sequence:NP_001008495.2Re-query CCDS DB by Nucleotide ID:NM_001008495Re-query CCDS DB by Protein ID:NP_001008495Link to BLAST:NP_001008495.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001008495.2 380 Q6YI46-1 380 100% 0 0

Chromosomal Locations for CCDS 34920.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 90625671 90625862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 90631552 90631707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 90645111 90645905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1143 nt):
ATGCGGAGCCCGGGCGGGATCCTGCTCCAGGCGCTGCCCCGGCTGCTGCAGCACGCCGCCCTCCCGGGCC
TCGCCGAGCTGCCGGCCCGCTGGGCCCTGCCGCGGGGTGCGGGCGGGGACGGCCCGGCGGACCGCCTTCC
CCGCGGGGGCGGGGCGAGCGCGGCGGCGGCAGCAGCGGCGGCCTCGGGCGCCCTGCTCGGCGCCTATCTG
GAGCGCCACGGTCCGCCCGAGGCTTCGGAGCTGCCGGAGCCGGGCGGGGCCTTGGCGGGCGGCCCCGGGA
GTGGCGGCGGCGGCGTGGTGGTCGGCGTGGCTGAGGTGAGAAACTGGCGCTGCTGCTGCCTCGGCAGCAC
CTGTTGGTGCCGGAGCCTCGTGCTGGTCTGCGTGTTGGCCGCCCTGTGCTTCGCTTCCCTGGCCCTGGTC
CGCCGCTACCTTCACCACCTCCTGCTGTGGGTGGAGAGCCTTGACTCGCTGCTGGGGGTCCTGCTCTTCG
TCGTGGGCTTCATCGTGGTCTCTTTCCCCTGCGGCTGGGGCTACATCGTGCTCAACGTGGCCGCTGGCTA
CCTGTACGGCTTCGTGCTGGGCATGGGTCTGATGATGGTGGGCGTCCTCATCGGCACCTTCATCGCCCAT
GTGGTCTGCAAGCGGCTCCTCACCGCCTGGGTGGCCGCCAGGATCCAGAGCAGCGAGAAGCTGAGCGCGG
TTATTCGCGTAGTGGAGGGAGGAAGCGGCCTGAAAGTGGTGGCGCTGGCCAGACTGACACCCATACCTTT
TGGGCTTCAGAATGCAGTGTTTTCGATTACTGATCTCTCATTACCCAACTATCTGATGGCATCTTCGGTT
GGACTGCTTCCTACCCAGCTTCTGAATTCTTACTTGGGTACCACCCTGCGGACAATGGAAGATGTCATTG
CAGAACAGAGTGTTAGTGGATATTTTGTTTTTTGTTTACAGATTATTATAAGTATAGGCCTCATGTTTTA
TGTAGTTCATCGAGCTCAAGTGGAATTGAATGCAGCTATTGTAGCTTGTGAAATGGAACTGAAATCTTCT
CTGGTTAAAGGCAATCAACCAAATACCAGTGGCTCTTCATTCTACAACAAGAGGACCCTAACATTTTCTG
GAGGTGGAATCAATGTTGTATGA

Translation (380 aa):
MRSPGGILLQALPRLLQHAALPGLAELPARWALPRGAGGDGPADRLPRGGGASAAAAAAAASGALLGAYL
ERHGPPEASELPEPGGALAGGPGSGGGGVVVGVAEVRNWRCCCLGSTCWCRSLVLVCVLAALCFASLALV
RRYLHHLLLWVESLDSLLGVLLFVVGFIVVSFPCGWGYIVLNVAAGYLYGFVLGMGLMMVGVLIGTFIAH
VVCKRLLTAWVAARIQSSEKLSAVIRVVEGGSGLKVVALARLTPIPFGLQNAVFSITDLSLPNYLMASSV
GLLPTQLLNSYLGTTLRTMEDVIAEQSVSGYFVFCLQIIISIGLMFYVVHRAQVELNAAIVACEMELKSS
LVKGNQPNTSGSSFYNKRTLTFSGGGINVV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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