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Report for CCDS18815.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18815.1 Public Mus musculus 4 Wnt4 23 108 98 CCDS HistoryNCBI Gene:22417Re-query CCDS DB by CCDS ID:18815.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18815.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000045747.4 ENSMUSP00000036580.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000045747.4Link to Ensembl Protein Viewer:ENSMUSP00000036580.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000045747Re-query CCDS DB by Protein ID:ENSMUSP00000036580
Original member Current member NCBI NM_009523.2 NP_033549.1 Accepted alive Link to Nucleotide Sequence:NM_009523.2Link to Protein Sequence:NP_033549.1Re-query CCDS DB by Nucleotide ID:NM_009523Re-query CCDS DB by Protein ID:NP_033549Link to BLAST:NP_033549.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033549.1 351 P22724 351 100% 0 0

Chromosomal Locations for CCDS 18815.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 137277680 137277756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 137289114 137289349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 137295441 137295572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 137295660 137295802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 137296312 137296779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1056 nt):
ATGAGCCCCCGTTCGTGCCTGCGGTCCCTGCGACTCCTCGTCTTCGCCGTGTTCTCGGCCGCCGCGAGCA
ATTGGCTGTACCTGGCCAAGCTGTCATCGGTGGGCAGCATCTCCGAAGAGGAGACGTGCGAGAAACTCAA
AGGCCTGATCCAGAGGCAGGTGCAGATGTGCAAACGGAACCTTGAGGTGATGGACTCAGTGCGCCGTGGT
GCCCAGCTGGCCATCGAGGAGTGCCAATACCAGTTCCGGAACCGGCGCTGGAACTGTTCCACACTGGACT
CCCTCCCTGTCTTTGGGAAGGTGGTGACACAAGGGACCCGGGAGGCGGCCTTTGTATACGCCATCTCTTC
AGCAGGTGTGGCCTTTGCAGTGACAAGGGCATGCAGCAGTGGAGAACTGGAGAAGTGTGGCTGTGACCGG
ACAGTGCACGGGGTCAGCCCACAGGGCTTCCAGTGGTCAGGATGCTCGGACAACATCGCCTATGGCGTAG
CCTTCTCACAGTCCTTTGTGGACGTCCGGGAGAGGAGCAAGGGGGCCTCCTCCAGCCGGGCACTCATGAA
TCTTCACAACAACGAGGCTGGCAGGAAGGCCATCTTGACACACATGCGGGTGGAGTGCAAGTGTCACGGG
GTGTCGGGCTCCTGCGAGGTAAAGACGTGCTGGCGTGCTGTACCGCCCTTCCGCCAGGTTGGCCACGCGC
TAAAGGAGAAGTTTGACGGTGCCACGGAGGTGGAGCCACGACGCGTAGGCTCCTCCCGGGCGCTGGTGCC
TCGGAATGCACAGTTCAAGCCACATACAGATGAGGACCTGGTATACCTGGAGCCTAGCCCGGACTTCTGT
GAGCAGGACATCCGCAGTGGCGTGCTAGGCACGAGGGGCCGCACGTGCAACAAGACATCTAAAGCCATTG
ACGGCTGCGAGCTACTGTGCTGTGGCCGCGGCTTCCACACAGCGCAAGTGGAGCTGGCCGAGCGCTGTGG
CTGCAGGTTCCACTGGTGCTGCTTCGTCAAGTGCCGGCAGTGCCAGCGGCTCGTGGAGATGCACACGTGC
CGGTGA

Translation (351 aa):
MSPRSCLRSLRLLVFAVFSAAASNWLYLAKLSSVGSISEEETCEKLKGLIQRQVQMCKRNLEVMDSVRRG
AQLAIEECQYQFRNRRWNCSTLDSLPVFGKVVTQGTREAAFVYAISSAGVAFAVTRACSSGELEKCGCDR
TVHGVSPQGFQWSGCSDNIAYGVAFSQSFVDVRERSKGASSSRALMNLHNNEAGRKAILTHMRVECKCHG
VSGSCEVKTCWRAVPPFRQVGHALKEKFDGATEVEPRRVGSSRALVPRNAQFKPHTDEDLVYLEPSPDFC
EQDIRSGVLGTRGRTCNKTSKAIDGCELLCCGRGFHTAQVELAERCGCRFHWCCFVKCRQCQRLVEMHTC
R


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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