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Report for CCDS33382.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33382.2 Public Homo sapiens 2 RESP18 24 110 108 CCDS HistoryNCBI Gene:389075Re-query CCDS DB by CCDS ID:33382.2Re-query CCDS DB by GeneID:389075See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 33382.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000333527.6 ENSP00000330269.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000333527.6Link to Ensembl Protein Viewer:ENSP00000330269.5Re-query CCDS DB by Nucleotide ID:ENST00000333527Re-query CCDS DB by Protein ID:ENSP00000330269
Original member Current member NCBI NM_001007089.4 NP_001007090.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001007089.4Link to Protein Sequence:NP_001007090.3Re-query CCDS DB by Nucleotide ID:NM_001007089Re-query CCDS DB by Protein ID:NP_001007090Link to BLAST:NP_001007090.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001007090.3 228 Q5W5W9-2 228 100% 0 0

Chromosomal Locations for CCDS 33382.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 219327517 219327563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219328924 219329008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219329163 219329252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219329637 219329764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219330771 219330875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219332524 219332738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219333161 219333177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (687 nt):
ATGGCAGTGGATGTGGAATTCGGAGTCGCGGGCTGGTGGGAAGCTGCAGCCCCGCTCAGCCCCTCGGCCG
TGGCCGCTACCTTCACTGAGACTTGGCCGGGGAGTGAGCGCGCCGAGCCTGGGAGGATACAGCACCCACT
GTGGCCTGGGAGCTCCGAGGGGCTCCAGCTGCTTGTCTGCTTCCTGCTGCTGAACAGCTGCCCGGGGGGC
TGCAGCGACACTAGTGCCCACGATGGTCAGGACCAAGTAGGAGTGGGGCAGCTTTGGCCCCTCCAAGGAT
TTGCCACCCCAGTCTTCCAGCATTTACAGGTTGTGCTCCAGCAGATTATACCCCAAGGTCTGTTCTGGAA
GGATGACATCACCCAGGATGCAATGATCCAAAAGATGGAGCATGCCAGCAGACTGCATCCCCAAGAACCA
TGCCTGAAGGATGGGAAGGCACTTTTCCCCACTAAAACCACTGAGAGCCCCCTGGCCAAGGTGAACAGGG
ATCAGTGCTTTACCTCCGAAGTGGTTTCTAAGGCCCTGAAACAAGAGGTGGCCAACCCTGTCAAGATTAC
CTATAGGTGTTCATATGGGGGGCTGGACATGATGCAGGCGCCGGGACCCTCTAAGGAAGAAATTATCTAT
AAGATCATGCGGCTTCTCTGGGCCACTTCCTACTGTGGGCCGCAACCCTGTGGCTGA

Translation (228 aa):
MAVDVEFGVAGWWEAAAPLSPSAVAATFTETWPGSERAEPGRIQHPLWPGSSEGLQLLVCFLLLNSCPGG
CSDTSAHDGQDQVGVGQLWPLQGFATPVFQHLQVVLQQIIPQGLFWKDDITQDAMIQKMEHASRLHPQEP
CLKDGKALFPTKTTESPLAKVNRDQCFTSEVVSKALKQEVANPVKITYRCSYGGLDMMQAPGPSKEEIIY
KIMRLLWATSYCGPQPCG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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