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Report for CCDS18518.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18518.1 Public Mus musculus 4 Mutyh 23 108 98 CCDS HistoryNCBI Gene:70603Re-query CCDS DB by CCDS ID:18518.1Re-query CCDS DB by GeneID:70603See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18518.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000102699.7 ENSMUSP00000099760.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000102699.7Link to Ensembl Protein Viewer:ENSMUSP00000099760.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000102699Re-query CCDS DB by Protein ID:ENSMUSP00000099760
Original member Current member NCBI NM_001159581.1 NP_001153053.1 Accepted alive Link to Nucleotide Sequence:NM_001159581.1Link to Protein Sequence:NP_001153053.1Re-query CCDS DB by Nucleotide ID:NM_001159581Re-query CCDS DB by Protein ID:NP_001153053Link to BLAST:NP_001153053.1
Original member Current member NCBI NM_133250.2 NP_573513.2 Accepted alive Link to Nucleotide Sequence:NM_133250.2Link to Protein Sequence:NP_573513.2Re-query CCDS DB by Nucleotide ID:NM_133250Re-query CCDS DB by Protein ID:NP_573513Link to BLAST:NP_573513.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001153053.1 515 Q99P21 515 100% 0 0
NP_573513.2 515 Q99P21 515 100% 0 0

Chromosomal Locations for CCDS 18518.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 116814325 116814436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116815564 116815712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116815799 116815838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116815962 116816035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116816313 116816354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116816436 116816507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116816583 116816696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116816778 116816875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116816955 116817099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116817180 116817234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116817384 116817575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116817669 116817805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116817888 116818037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116818241 116818282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116819255 116819380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1548 nt):
ATGAAGAAACTCCAAGCATCTGTGAGGAGTCACAAAAAGCAACCAGCCAACCACAAGAGAAGGAGAACAC
GTGCCCTTAGCAGCAGCCAGGCCAAGCCTTCCAGCCTGGATGGCCTGGCCAAGCAGAAGAGAGAGGAGTT
ACTGCAGGCCTCTGTCTCCCCATATCATCTCTTCAGCGACGTGGCCGATGTCACAGCTTTCCGAAGCAAC
TTGCTCAGCTGGTATGACCAAGAGAAGCGTGACCTCCCTTGGAGAAACTTGGCAAAAGAAGAGGCCAACT
CGGACAGGAGGGCCTATGCTGTGTGGGTGTCAGAGGTTATGCTGCAGCAGACCCAGGTTGCCACAGTGAT
CGACTATTATACTCGATGGATGCAGAAGTGGCCAAAGCTTCAAGACCTGGCCAGCGCTTCCCTGGAGGAG
GTGAACCAGCTCTGGTCTGGCCTGGGCTACTATTCTCGAGGCCGTCGGCTACAAGAAGGAGCTAGGAAGG
TGGTAGAGGAGCTAGGAGGCCATATGCCACGTACAGCAGAGACCCTACAGCAGCTCCTGCCTGGTGTGGG
GCGGTACACGGCTGGAGCCATTGCTTCCATCGCCTTTGACCAGGTAACCGGTGTGGTGGATGGGAACGTT
TTACGGGTGCTGTGCCGTGTCCGGGCCATTGGTGCCGATCCCACCAGCACCCTTGTCTCTCATCACCTCT
GGAACTTAGCCCAGCAGCTCGTGGACCCAGCCCGGCCTGGGGACTTCAATCAAGCTGCCATGGAGCTGGG
GGCTACAGTGTGCACCCCACAGCGCCCTCTCTGCAGCCATTGCCCCGTGCAGAGTTTATGCCGGGCATAC
CAGAGGGTGCAGCGGGGTCAGCTCTCAGCCTTGCCAGGCCGTCCTGACATAGAGGAGTGTGCTCTCAACA
CTAGACAGTGCCAGCTTTGCCTCACTTCCTCAAGCCCCTGGGACCCCAGCATGGGAGTGGCCAACTTTCC
TCGAAAGGCCAGCCGCAGGCCTCCCAGGGAGGAGTACTCTGCCACCTGTGTTGTGGAGCAGCCCGGAGCC
ATCGGGGGTCCCCTGGTCCTCCTGGTGCAAAGGCCTGACTCAGGTCTGCTGGCAGGACTGTGGGAGTTCC
CATCTGTCACCTTGGAGCCCTCAGAACAGCATCAGCACAAAGCCCTTCTGCAGGAACTGCAGCGCTGGTG
TGGGCCCCTCCCTGCCATTCGTCTCCAGCACCTTGGGGAGGTTATCCACATCTTCTCTCACATCAAACTG
ACGTATCAAGTATATAGTCTGGCTCTAGATCAAGCCCCAGCGAGCACTGCACCTCCTGGCGCTCGATGGC
TGACCTGGGAGGAATTCTGCAATGCAGCTGTGTCTACTGCCATGAAAAAGGTGTTCCGCATGTATGAGGA
CCATCGGCAAGGGACCCGCAAGGGTTCAAAAAGGTCCCAGGTGTGTCCTCCATCAAGCAGGAAAAAACCC
AGCCTGGGACAGCAAGTCCTGGATACTTTCTTTCAGCGTCATATCCCCACAGACAAACCCAACAGTACTA
CCCAGTGA

Translation (515 aa):
MKKLQASVRSHKKQPANHKRRRTRALSSSQAKPSSLDGLAKQKREELLQASVSPYHLFSDVADVTAFRSN
LLSWYDQEKRDLPWRNLAKEEANSDRRAYAVWVSEVMLQQTQVATVIDYYTRWMQKWPKLQDLASASLEE
VNQLWSGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFDQVTGVVDGNV
LRVLCRVRAIGADPTSTLVSHHLWNLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSHCPVQSLCRAY
QRVQRGQLSALPGRPDIEECALNTRQCQLCLTSSSPWDPSMGVANFPRKASRRPPREEYSATCVVEQPGA
IGGPLVLLVQRPDSGLLAGLWEFPSVTLEPSEQHQHKALLQELQRWCGPLPAIRLQHLGEVIHIFSHIKL
TYQVYSLALDQAPASTAPPGARWLTWEEFCNAAVSTAMKKVFRMYEDHRQGTRKGSKRSQVCPPSSRKKP
SLGQQVLDTFFQRHIPTDKPNSTTQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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