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Report for CCDS35678.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35678.2 Public Mus musculus 1 Ppip5k2 23 108 98 CCDS HistoryNCBI Gene:227399Re-query CCDS DB by CCDS ID:35678.2See the combined annotation on chromosome 1 in Sequence Viewer

Public Note for CCDS 35678.1
The coding region has been updated to extend the N-terminus to one that is more supported by the available transcript data and by conservation in some species.

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 35678.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000042509.12 ENSMUSP00000043401.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000042509.12Link to Ensembl Protein Viewer:ENSMUSP00000043401.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000042509Re-query CCDS DB by Protein ID:ENSMUSP00000043401
Original member NCBI NM_173760.5 NP_776121.4 Updated not alive Link to Nucleotide Sequence:NM_173760.5Link to Protein Sequence:NP_776121.4Re-query CCDS DB by Nucleotide ID:NM_173760Re-query CCDS DB by Protein ID:NP_776121
Current member NCBI NM_173760.6 NP_776121.4 Accepted alive Link to Nucleotide Sequence:NM_173760.6Link to Protein Sequence:NP_776121.4Re-query CCDS DB by Nucleotide ID:NM_173760Re-query CCDS DB by Protein ID:NP_776121Link to BLAST:NP_776121.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_776121.4 1129 Q6ZQB6-1 1129 100% 0 0

Chromosomal Locations for CCDS 35678.2

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 97707718 97707830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97711723 97711848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97713004 97713144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97719834 97719906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97723670 97723834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97727189 97727305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97727395 97727502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97728918 97729032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97729911 97730038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97733886 97734109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97734967 97735108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97740462 97740644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97740824 97740945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97741070 97741195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97744057 97744142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97745163 97745272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97745395 97745470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97746418 97746504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97747547 97747648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97749542 97749663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97750567 97750728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97752704 97752805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97755055 97755209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97755886 97755971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97756844 97756934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97759169 97759364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97761425 97761556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3390 nt):
ATGTCAAATTCAAGAAAAATGAGTGAACCCCCCAGATTCTTTGTTGGGCCCGAAGATGCGGAAATCAATC
CTGGAAACTATCGTCGCTTCTTCCACCATGCTGAAGAGGAGGAGGAGGAGGAGGATGAGTCTCCACCAGA
AAGGCAGATTGTGGTTGGAATATGTTCCATGGCAAAGAAATCCAAATCCAAACCCATGAAGGAAATTCTG
GAACGGATCTCCTTGTTTAAGTACATCACAGTAGTGGTTTTTGAAGAGGAAATTATTTTGAATGAACCCG
TGGAAAACTGGCCTTTATGTGATTGTCTTATTTCTTTCCATTCTAAAGGATTTCCACTGGACAAAGCAGT
TGCCTATGCAAAACTCAGGAATCCATTTGTAATCAATGACTTGAATATGCAGTATCTCATACAAGATAGA
AGAGACGTGTATAGCATTCTTCAAGCTGAAGGCATCCTACTTCCTCGGTATGCAATCCTGAACCGTGATC
CAAATAACCCGAAAGAATGCAACCTGATTGAAGGAGAAGATCATGTAGAAGTGAATGGGGAAGTTTTCCA
AAAGCCCTTTGTGGAGAAGCCGGTCAGTGCAGAGGACCACAATGTTTACATTTATTATCCAACATCCGCC
GGAGGTGGGAGTCAGAGACTTTTCCGGAAGATTGGCAGTAGAAGTAGTGTGTATTCCCCAGAGAGCAACG
TTCGAAAAACGGGGTCATATATATATGAAGAGTTTATGCCTACAGATGGTACTGATGTTAAGGTTTATAC
CGTGGGTCCAGACTATGCACATGCTGAAGCTCGAAAATCTCCAGCTCTCGATGGCAAGGTAGAGCGAGAC
AGCGAAGGGAAGGAAGTAAGATACCCCGTCATCCTCAATGCACGGGAGAAGCTGATTGCGTGGAAAGTCT
GCCTTGCTTTTAAGCAAACGGTTTGTGGCTTTGATTTGTTACGTGCCAATGGACAATCCTATGTATGCGA
TGTCAATGGCTTCAGTTTTGTGAAAAATTCCATGAAGTACTATGATGACTGTGCAAAAATTCTTGGCAAT
ATCGTAATGCGGGAGCTTGCACCACAGTTTCATATCCCGTGGTCAATACCATTAGAAGCTGAAGATATTC
CAATTGTACCAACTACCTCTGGAACTATGATGGAACTTCGATGTGTCATCGCTGTGATACGACATGGGGA
TCGAACACCGAAACAGAAAATGAAAATGGAAGTGAGGCATCAGAAGTTTTTTGACCTTTTTGAAAAGTGT
GATGGATATAAATCAGGGAAGTTAAAGCTCAAGAAGCCAAAACAATTACAGGAAGTCCTGGATATTGCAA
GGCAGCTTCTTATGGAGCTGGGGCAAAATAATGACTCTGAAATTGAAGAAAACAAGTCAAAACTTGAACA
ACTTAAGACTGTGTTAGAGATGTATGGTCATTTTTCAGGAATAAACCGTAAGGTCCAATTAACCTATCTT
CCTCATGGCTGTCCGAAAACATCCAGTGAGGAGGAAGATAACCGAAGAGAGGAGCCGTCCTTACTTTTGG
TTCTAAAATGGGGAGGAGAACTGACCCCTGCGGGCAGGGTTCAGGCTGAAGAGCTGGGAAGAGCTTTTCG
GTGTATGTACCCTGGAGGTCAAGGAGATTATGCAGGATTTCCTGGTTGTGGTTTACTCCGACTACATAGC
ACCTACAGGCATGACCTCAAAATATATGCCTCTGATGAAGGGCGGGTCCAGATGACGGCGGCTGCTTTCG
CAAAGGGTCTCTTGGCTCTAGAAGGAGAGCTTACCCCCATTCTTGTTCAGATGGTGAAAAGTGCAAACAT
GAACGGCCTTTTGGATAGTGATAGTGACTCTTTGAGTAGCTGTCAGCAGCGTGTGAAAGCGAGGCTTCAT
GAAATACTTCAGAAAGACAGGGATTTCACAGCTGAGGACTACGAGAAGCTTACTCCATCTGGAAGCATTT
CTGTTATCAAATCAATGCATTTGATTAAAAATCCAGTGAAAACCTGTGACAAAGTGTATTCCTTGATTCA
AAGTTTGACTTCCCAAATTAGATATCGGATGGAAGATCCCAAATCAGCTGATATTCAGCTTTACCACAGT
GAGACCCTGGAACTTATGCTGCGTAGATGGTCCAAGTTGGAGAAGGATTTTAAAACAAAGAATGGAAGAT
ATGATATTAGCAAGATCCCTGACATATATGACTGCATCAAATATGACGTTCAGCATAACGGTTCCTTGAA
GTTAGAAAACACAATGGAACTATATAGGCTTTCAAAGGCATTAGCAGATATTGTTATCCCTCAGGAATAT
GGTATAACTAAAGCTGAAAAACTGGAGATTGCCAAAGGCTACTGTACTCCACTAGTTAGAAAAATCCGAT
CAGATCTTCAGAGGACACAAGATGATGATACTGTCAATAAACTCCATCCTGTGTATTCTAGAGGTGTTCT
GTCTCCTGAGCGGCACGTCCGCACCAGATTATATTTTACCAGTGAGAGTCATGTGCATTCTTTACTATCC
ATTCTTCGGTATGGCGCCTTATGCGATGACTCAAAGGATGAGCAGTGGAAACGAGCTATGGATTATCTAA
ACGTCGTCAATGAGCTCAACTACATGACGCAGATTGTTATCATGCTCTATGAGGATCCCAACAAGGACCT
TTCCTCAGAGGAACGCTTTCATGTTGAGTTACATTTTAGTCCTGGAGCCAAAGGCTGTGAAGAAGATAAG
AATTTGCCATCTGGCTATGGGTATAGGCCAGCATCCAGGGAGAATGAAGGCAGAAGGTCTCTTAAAACTG
ACGATGATGAGCCTCACACTTCTAAACGAGATGAAGTTGACCGGGCCGTGATGTTGTTTAAACCATTGGT
GTCTGAGCCAATTCATATACACAGGAAATCACCGCTTCCGAGGTCCAGGAAGATTACTGCAAATGAGGTT
GTGTCTGAGAATGCCAACTATCTCCGAACACCAAGAAATCTTGTGGAACAGAAGCAGAACCCTACAGTAG
GCTTCGAGCTGTATTCCATGGTACCATCCATCTGTCCTCTAGAAACACTTCACAATGCCCTGTTTTTAAA
GCAAGTGGATGACTTTCTGGCTTCCATTGCTTCTCCATCAACGGAGGTTCTGCGCAAGGTCCCCGAAATG
TCCTCTATGGCCACACGTTCCAGTCCAGGAATGAGAAGAAAAATTTCCTTAAATACGTATACACCTACAA
AGATCCTCCCAACACCACCTGCTGCTTTAAAGAGCAGCAAAGCAAGCAGCAAAGCAGCAGCCGGCGGACC
ATCTCAGGCAATGGCTCCCCATACCTCATCTCGGAAGAAGAGCATAAATAGCAAAACCGAGGGGCATGAA
CCCAAGAAAAGCACTGGGAAGAAAAGATGA

Translation (1129 aa):
MSNSRKMSEPPRFFVGPEDAEINPGNYRRFFHHAEEEEEEEDESPPERQIVVGICSMAKKSKSKPMKEIL
ERISLFKYITVVVFEEEIILNEPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNPFVINDLNMQYLIQDR
RDVYSILQAEGILLPRYAILNRDPNNPKECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSA
GGGSQRLFRKIGSRSSVYSPESNVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERD
SEGKEVRYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKILGN
IVMRELAPQFHIPWSIPLEAEDIPIVPTTSGTMMELRCVIAVIRHGDRTPKQKMKMEVRHQKFFDLFEKC
DGYKSGKLKLKKPKQLQEVLDIARQLLMELGQNNDSEIEENKSKLEQLKTVLEMYGHFSGINRKVQLTYL
PHGCPKTSSEEEDNRREEPSLLLVLKWGGELTPAGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHS
TYRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQQRVKARLH
EILQKDRDFTAEDYEKLTPSGSISVIKSMHLIKNPVKTCDKVYSLIQSLTSQIRYRMEDPKSADIQLYHS
ETLELMLRRWSKLEKDFKTKNGRYDISKIPDIYDCIKYDVQHNGSLKLENTMELYRLSKALADIVIPQEY
GITKAEKLEIAKGYCTPLVRKIRSDLQRTQDDDTVNKLHPVYSRGVLSPERHVRTRLYFTSESHVHSLLS
ILRYGALCDDSKDEQWKRAMDYLNVVNELNYMTQIVIMLYEDPNKDLSSEERFHVELHFSPGAKGCEEDK
NLPSGYGYRPASRENEGRRSLKTDDDEPHTSKRDEVDRAVMLFKPLVSEPIHIHRKSPLPRSRKITANEV
VSENANYLRTPRNLVEQKQNPTVGFELYSMVPSICPLETLHNALFLKQVDDFLASIASPSTEVLRKVPEM
SSMATRSSPGMRRKISLNTYTPTKILPTPPAALKSSKASSKAAAGGPSQAMAPHTSSRKKSINSKTEGHE
PKKSTGKKR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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