NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS35678.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35678.2 Public Mus musculus 1 Ppip5k2 23 108 98 CCDS HistoryNCBI Gene:227399Re-query CCDS DB by CCDS ID:35678.2See the combined annotation on chromosome 1 in Sequence Viewer

Public Note for CCDS 35678.1
The coding region has been updated to extend the N-terminus to one that is more supported by the available transcript data and by conservation in some species.

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 35678.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000042509.12 ENSMUSP00000043401.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000042509.12Link to Ensembl Protein Viewer:ENSMUSP00000043401.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000042509Re-query CCDS DB by Protein ID:ENSMUSP00000043401
Original member NCBI NM_173760.5 NP_776121.4 Updated not alive Link to Nucleotide Sequence:NM_173760.5Link to Protein Sequence:NP_776121.4Re-query CCDS DB by Nucleotide ID:NM_173760Re-query CCDS DB by Protein ID:NP_776121
Current member NCBI NM_173760.6 NP_776121.4 Accepted alive Link to Nucleotide Sequence:NM_173760.6Link to Protein Sequence:NP_776121.4Re-query CCDS DB by Nucleotide ID:NM_173760Re-query CCDS DB by Protein ID:NP_776121Link to BLAST:NP_776121.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_776121.4 1129 Q6ZQB6-1 1129 100% 0 0

Chromosomal Locations for CCDS 35678.2

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 97707718 97707830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97711723 97711848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97713004 97713144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97719834 97719906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97723670 97723834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97727189 97727305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97727395 97727502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97728918 97729032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97729911 97730038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97733886 97734109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97734967 97735108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97740462 97740644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97740824 97740945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97741070 97741195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97744057 97744142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97745163 97745272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97745395 97745470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97746418 97746504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97747547 97747648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97749542 97749663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97750567 97750728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97752704 97752805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97755055 97755209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97755886 97755971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97756844 97756934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97759169 97759364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 97761425 97761556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3390 nt):
ATGTCAAATTCAAGAAAAATGAGTGAACCCCCCAGATTCTTTGTTGGGCCCGAAGATGCGGAAATCAATC
CT
GGAAACTATCGTCGCTTCTTCCACCATGCTGAAGAGGAGGAGGAGGAGGAGGATGAGTCTCCACCAGA
A
AGGCAGATTGTGGTTGGAATATGTTCCATGGCAAAGAAATCCAAATCCAAACCCATGAAGGAAATTCTG
GAA
CGGATCTCCTTGTTTAAGTACATCACAGTAGTGGTTTTTGAAGAGGAAATTATTTTGAATGAACCCG
TG
GAAAACTGGCCTTTATGTGATTGTCTTATTTCTTTCCATTCTAAAGGATTTCCACTGGACAAAGCAGT
T
GCCTATGCAAAACTCAGGAATCCATTTGTAATCAATGACTTGAATATGCAGTATCTCATACAAGATAGA
AGA
GACGTGTATAGCATTCTTCAAGCTGAAGGCATCCTACTTCCTCGGTATGCAATCCTGAACCGTGATC
CA
AATAACCCGAAAGAATGCAACCTGATTGAAGGAGAAGATCATGTAGAAGTGAATGGGGAAGTTTTCCA
A
AAGCCCTTTGTGGAGAAGCCGGTCAGTGCAGAGGACCACAATGTTTACATTTATTATCCAACATCCGCC
GGA
GGTGGGAGTCAGAGACTTTTCCGGAAGATTGGCAGTAGAAGTAGTGTGTATTCCCCAGAGAGCAACG
TT
CGAAAAACGGGGTCATATATATATGAAGAGTTTATGCCTACAGATGGTACTGATGTTAAGGTTTATAC
C
GTGGGTCCAGACTATGCACATGCTGAAGCTCGAAAATCTCCAGCTCTCGATGGCAAGGTAGAGCGAGAC
AGC
GAAGGGAAGGAAGTAAGATACCCCGTCATCCTCAATGCACGGGAGAAGCTGATTGCGTGGAAAGTCT
GC
CTTGCTTTTAAGCAAACGGTTTGTGGCTTTGATTTGTTACGTGCCAATGGACAATCCTATGTATGCGA
T
GTCAATGGCTTCAGTTTTGTGAAAAATTCCATGAAGTACTATGATGACTGTGCAAAAATTCTTGGCAAT
ATC
GTAATGCGGGAGCTTGCACCACAGTTTCATATCCCGTGGTCAATACCATTAGAAGCTGAAGATATTC
CA
ATTGTACCAACTACCTCTGGAACTATGATGGAACTTCGATGTGTCATCGCTGTGATACGACATGGGGA
T
CGAACACCGAAACAGAAAATGAAAATGGAAGTGAGGCATCAGAAGTTTTTTGACCTTTTTGAAAAGTGT
GAT
GGATATAAATCAGGGAAGTTAAAGCTCAAGAAGCCAAAACAATTACAGGAAGTCCTGGATATTGCAA
GG
CAGCTTCTTATGGAGCTGGGGCAAAATAATGACTCTGAAATTGAAGAAAACAAGTCAAAACTTGAACA
A
CTTAAGACTGTGTTAGAGATGTATGGTCATTTTTCAGGAATAAACCGTAAGGTCCAATTAACCTATCTT
CCT
CATGGCTGTCCGAAAACATCCAGTGAGGAGGAAGATAACCGAAGAGAGGAGCCGTCCTTACTTTTGG
TT
CTAAAATGGGGAGGAGAACTGACCCCTGCGGGCAGGGTTCAGGCTGAAGAGCTGGGAAGAGCTTTTCG
G
TGTATGTACCCTGGAGGTCAAGGAGATTATGCAGGATTTCCTGGTTGTGGTTTACTCCGACTACATAGC
ACC
TACAGGCATGACCTCAAAATATATGCCTCTGATGAAGGGCGGGTCCAGATGACGGCGGCTGCTTTCG
CA
AAGGGTCTCTTGGCTCTAGAAGGAGAGCTTACCCCCATTCTTGTTCAGATGGTGAAAAGTGCAAACAT
G
AACGGCCTTTTGGATAGTGATAGTGACTCTTTGAGTAGCTGTCAGCAGCGTGTGAAAGCGAGGCTTCAT
GAA
ATACTTCAGAAAGACAGGGATTTCACAGCTGAGGACTACGAGAAGCTTACTCCATCTGGAAGCATTT
CT
GTTATCAAATCAATGCATTTGATTAAAAATCCAGTGAAAACCTGTGACAAAGTGTATTCCTTGATTCA
A
AGTTTGACTTCCCAAATTAGATATCGGATGGAAGATCCCAAATCAGCTGATATTCAGCTTTACCACAGT
GAG
ACCCTGGAACTTATGCTGCGTAGATGGTCCAAGTTGGAGAAGGATTTTAAAACAAAGAATGGAAGAT
AT
GATATTAGCAAGATCCCTGACATATATGACTGCATCAAATATGACGTTCAGCATAACGGTTCCTTGAA
G
TTAGAAAACACAATGGAACTATATAGGCTTTCAAAGGCATTAGCAGATATTGTTATCCCTCAGGAATAT
GGT
ATAACTAAAGCTGAAAAACTGGAGATTGCCAAAGGCTACTGTACTCCACTAGTTAGAAAAATCCGAT
CA
GATCTTCAGAGGACACAAGATGATGATACTGTCAATAAACTCCATCCTGTGTATTCTAGAGGTGTTCT
G
TCTCCTGAGCGGCACGTCCGCACCAGATTATATTTTACCAGTGAGAGTCATGTGCATTCTTTACTATCC
ATT
CTTCGGTATGGCGCCTTATGCGATGACTCAAAGGATGAGCAGTGGAAACGAGCTATGGATTATCTAA
AC
GTCGTCAATGAGCTCAACTACATGACGCAGATTGTTATCATGCTCTATGAGGATCCCAACAAGGACCT
T
TCCTCAGAGGAACGCTTTCATGTTGAGTTACATTTTAGTCCTGGAGCCAAAGGCTGTGAAGAAGATAAG
AAT
TTGCCATCTGGCTATGGGTATAGGCCAGCATCCAGGGAGAATGAAGGCAGAAGGTCTCTTAAAACTG
AC
GATGATGAGCCTCACACTTCTAAACGAGATGAAGTTGACCGGGCCGTGATGTTGTTTAAACCATTGGT
G
TCTGAGCCAATTCATATACACAGGAAATCACCGCTTCCGAGGTCCAGGAAGATTACTGCAAATGAGGTT
GTG
TCTGAGAATGCCAACTATCTCCGAACACCAAGAAATCTTGTGGAACAGAAGCAGAACCCTACAGTAG
GC
TTCGAGCTGTATTCCATGGTACCATCCATCTGTCCTCTAGAAACACTTCACAATGCCCTGTTTTTAAA
G
CAAGTGGATGACTTTCTGGCTTCCATTGCTTCTCCATCAACGGAGGTTCTGCGCAAGGTCCCCGAAATG
T
CC
TCTATGGCCACACGTTCCAGTCCAGGAATGAGAAGAAAAATTTCCTTAAATACGTATACACCTACAA
AG
ATCCTCCCAACACCACCTGCTGCTTTAAAGAGCAGCAAAGCAAGCAGCAAAGCAGCAGCCGGCGGACC
A
TCTCAGGCAATGGCTCCCCATACCTCATCTCGGAAGAAGAGCATAAATAGCAAAACCGAGGGGCATGAA
CCC
AAGAAAAGCACTGGGAAGAAAAGATGA


Translation (1129 aa):
MSNSRKMSEPPRFFVGPEDAEINPGNYRRFFHHAEEEEEEEDESPPERQIVVGICSMAKKSKSKPMKEIL
E
RISLFKYITVVVFEEEIILNEPVENWPLCDCLISFHSK
GFPLDKAVAYAKLRNPFVINDLNMQYLIQDR
R
DVYSILQAEGILLPRYAILNRDPNNPK
ECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSA
G
GGSQRLFRK
IGSRSSVYSPESNVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERD
S
EGKEVRYPVILNAREKLIAWKVCLAFK
QTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKILGN
I
VMRELAPQFHIPWSIPLEAEDIPIVPTTSGT
MMELRCVIAVIRHGDRTPKQKMKMEVRHQKFFDLFEKC
D
GYKSGKLKLKKPKQLQ
EVLDIARQLLMELGQNNDSEIEENKSKLEQLKTVLEMYGHFSGINRKVQLTYL
P
HGCPKTSSEEE
DNRREEPSLLLVLKWGGELTPAGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHS
T
YRHDLKIYASDEGRVQMTAAAFAK
GLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQQRVKARLH
E
ILQKDRDFTAEDYEK
LTPSGSISVIKSMHLIKNPVKTCDKVYSLIQSLTSQIRYRMEDPKSADIQLYHS
E
TLELMLRRWSKLEKDFKTKNGRYDISKIPDIYDCIKYDVQHNGSLKLENTMELYRLSKALADIVIPQ
EY
G
ITKAEKLEIAKGYCTPLVRKIRSDLQRTQDDDTVNKLHP
VYSRGVLSPERHVRTRLYFTSESHVHSLLS
I
LRYGALCD
DSKDEQWKRAMDYLNVVNELNYMTQIVIMLYEDPNKDLSSEERFHVELHFSPGAKGCEEDK
N
LPSGYGYRPASRE
NEGRRSLKTDDDEPHTSKRDEVDRAVMLFKPLVSEPIHIHRKSPLPRSRKITANEV
V
SENANYLRTPRNLVEQKQNPTV
GFELYSMVPSICPLETLHNALFLKQVDDFLASIASPSTEVLRKVPEM
S
SMATRSSPGMRRKISLNTYTPTKILPTPPAALKSSKASSKAAAGGPSQAMAPHTSSRKKSINSKTEGHE
P
KKSTGKKR




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser