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Report for CCDS3016.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3016.1 Public Homo sapiens 3 PARP15 24 110 108 CCDS HistoryNCBI Gene:165631Re-query CCDS DB by CCDS ID:3016.1Re-query CCDS DB by GeneID:165631See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3016.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000310366.8 ENSP00000308436.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000310366.8Link to Ensembl Protein Viewer:ENSP00000308436.4Re-query CCDS DB by Nucleotide ID:ENST00000310366Re-query CCDS DB by Protein ID:ENSP00000308436
Original member Current member NCBI NM_152615.3 NP_689828.1 Accepted alive Link to Nucleotide Sequence:NM_152615.3Link to Protein Sequence:NP_689828.1Re-query CCDS DB by Nucleotide ID:NM_152615Re-query CCDS DB by Protein ID:NP_689828Link to BLAST:NP_689828.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689828.1 444 Q460N3-2 444 100% 0 0

Chromosomal Locations for CCDS 3016.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 122615710 122615857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 122617015 122617164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 122619781 122619843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 122621444 122621611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 122626827 122627033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 122632086 122632219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 122635020 122635194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 122635811 122636100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1335 nt):
ATGCTCCAAAGAATTGGATTAATATTTTTACACAATATTGTTGTAGTCAGTAACTGTTTCTATTTCCAGG
CATTTTTAGATGAATTCACTAACTGGTCAAGAATAAATCCCAACAAGGCCAGGATTCCCATGGCAGGAGA
TACCCAAGGTGTGGTCGGGACTGTCTCTAAGCCTTGTTTCACAGCATATGAAATGAAAATCGGTGCAATT
ACTTTTCAGGTTGCTACTGGAGATATAGCCACTGAACAGGTAGATGTTATTGTAAACTCAACAGCAAGGA
CATTTAATCGGAAATCAGGTGTGTCAAGAGCTATTTTAGAAGGTGCTGGACAAGCTGTGGAAAGTGAATG
TGCTGTACTAGCTGCACAGCCTCACAGAGATTTTATAATTACACCAGGTGGATGCTTAAAGTGCAAAATA
ATAATTCATGTTCCTGGGGGAAAAGATGTCAGGAAAACGGTCACCAGTGTTCTAGAAGAGTGTGAACAGA
GGAAGTACACATCGGTTTCCCTTCCAGCCATTGGAACAGGAAATGCCGGAAAAAACCCTATCACAGTTGC
TGATAACATAATCGATGCTATTGTAGACTTCTCATCACAACATTCCACCCCATCATTAAAAACAGTTAAA
GTTGTCATTTTTCAACCTGAGCTGCTAAATATATTCTACGACAGCATGAAAAAAAGAGACCTCTCTGCAT
CACTGAACTTTCAGTCCACATTCTCCATGACTACATGTAATCTTCCTGAACACTGGACTGACATGAATCA
TCAGCTGTTTTGCATGGTCCAGCTAGAGCCAGGACAATCAGAATATAATACCATAAAGGACAAGTTCACC
CGAACTTGTTCTTCCTACGCAATAGAGAAGATTGAGAGGATACAGAATGCATTTCTCTGGCAGAGCTACC
AGGTAAAGAAAAGGCAAATGGATATCAAGAATGACCATAAGAATAATGAGAGACTCCTCTTCCATGGGAC
AGATGCAGACTCAGTGCCATATGTCAATCAGCACGGCTTTAATAGAAGTTGTGCTGGGAAAAATGCTGTA
TCCTATGGAAAAGGAACCTATTTTGCTGTGGATGCCAGTTATTCTGCCAAGGACACCTACTCCAAGCCAG
ACAGCAATGGGAGAAAGCACATGTACGTTGTGCGAGTACTTACTGGAGTCTTCACAAAGGGACGTGCAGG
ATTAGTCACCCCTCCACCCAAGAATCCTCACAATCCCACAGATCTCTTTGACTCAGTGACAAACAATACA
CGATCTCCAAAGCTATTTGTGGTATTCTTTGATAATCAGGCTTACCCAGAATATCTCATAACTTTCACGG
CTTAA

Translation (444 aa):
MLQRIGLIFLHNIVVVSNCFYFQAFLDEFTNWSRINPNKARIPMAGDTQGVVGTVSKPCFTAYEMKIGAI
TFQVATGDIATEQVDVIVNSTARTFNRKSGVSRAILEGAGQAVESECAVLAAQPHRDFIITPGGCLKCKI
IIHVPGGKDVRKTVTSVLEECEQRKYTSVSLPAIGTGNAGKNPITVADNIIDAIVDFSSQHSTPSLKTVK
VVIFQPELLNIFYDSMKKRDLSASLNFQSTFSMTTCNLPEHWTDMNHQLFCMVQLEPGQSEYNTIKDKFT
RTCSSYAIEKIERIQNAFLWQSYQVKKRQMDIKNDHKNNERLLFHGTDADSVPYVNQHGFNRSCAGKNAV
SYGKGTYFAVDASYSAKDTYSKPDSNGRKHMYVVRVLTGVFTKGRAGLVTPPPKNPHNPTDLFDSVTNNT
RSPKLFVVFFDNQAYPEYLITFTA


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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