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Report for CCDS55116.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55116.1 Public Homo sapiens 7 CRCP 24 110 108 CCDS HistoryNCBI Gene:27297Re-query CCDS DB by CCDS ID:55116.1Re-query CCDS DB by GeneID:27297See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55116.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000431089.6 ENSP00000388653.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000431089.6Link to Ensembl Protein Viewer:ENSP00000388653.2Re-query CCDS DB by Nucleotide ID:ENST00000431089Re-query CCDS DB by Protein ID:ENSP00000388653
Original member Current member NCBI NM_001142414.1 NP_001135886.1 Accepted alive Link to Nucleotide Sequence:NM_001142414.1Link to Protein Sequence:NP_001135886.1Re-query CCDS DB by Nucleotide ID:NM_001142414Re-query CCDS DB by Protein ID:NP_001135886Link to BLAST:NP_001135886.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001135886.1 141 O75575-3 141 100% 0 0

Chromosomal Locations for CCDS 55116.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 66114829 66114914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 66127704 66127740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 66134280 66134374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 66145443 66145500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 66152208 66152357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (426 nt):
ATGCAGCGCGGCGATCCCGGCGAGCACCTTGGCGCGCGGAGCTGGCACCTTGGCGCTGTTGGTGGCGGCG
GAGACAGCTGTGAAGTGAAGGATGCCAATTCTGCGCTTCTCAGTAACTACGAGACGTTAAAATACATATC
AAAAACACCATGCAGGCACCAGAGTCCTGAAATTGTCAGAGAATTTCTCACAGCATTGAAAAGCCACAAG
TTGACCAAAGCTGAGAAGCTCCAGCTGCTGAACCACCGGCCTGTGACTGCTGTGGAGATCCAGCTGATGG
TGGAAGAGAGTGAAGAGCGGCTCACGGAGGAGCAGATTGAAGCTCTTCTCCACACCGTCACCAGCATTCT
GCCTGCAGAGCCAGAGGCTGAGCAGAAGAAGAATACAAACAGCAATGTGGCAATGGACGAAGAGGACCCA
GCATAG

Translation (141 aa):
MQRGDPGEHLGARSWHLGAVGGGGDSCEVKDANSALLSNYETLKYISKTPCRHQSPEIVREFLTALKSHK
LTKAEKLQLLNHRPVTAVEIQLMVEESEERLTEEQIEALLHTVTSILPAEPEAEQKKNTNSNVAMDEEDP
A


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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